Truf034395.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tachinus rufipes
Gene Symbol
ZNF236
Assembly
GCA_963932245.1
Location
OZ010744.1:101216133-101230011[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.0023 0.6 13.0 0.5 2 23 125 146 124 146 0.97
2 22 0.00062 0.16 14.8 0.8 1 23 152 174 152 174 0.97
3 22 9.6e-05 0.025 17.3 0.2 3 23 181 201 180 201 0.97
4 22 0.037 9.7 9.2 0.2 2 23 208 229 207 229 0.97
5 22 0.013 3.3 10.7 1.0 1 23 245 267 245 267 0.96
6 22 0.00039 0.1 15.4 6.0 1 23 290 312 290 312 0.98
7 22 0.00078 0.21 14.5 6.6 1 23 318 340 318 340 0.98
8 22 0.00056 0.15 14.9 0.9 1 23 346 369 346 369 0.96
9 22 0.041 11 9.0 4.7 1 23 379 402 379 402 0.96
10 22 5.4e-07 0.00014 24.4 0.6 1 23 480 502 480 502 0.98
11 22 2.5e-05 0.0066 19.2 2.6 1 23 508 530 508 530 0.96
12 22 9.1e-05 0.024 17.4 0.7 1 23 535 557 535 557 0.99
13 22 0.0027 0.71 12.8 6.0 1 23 611 633 611 633 0.99
14 22 9.3e-05 0.025 17.4 1.4 1 23 639 661 639 661 0.98
15 22 0.00055 0.15 14.9 3.9 1 23 667 689 667 689 0.98
16 22 0.2 54 6.9 4.0 1 23 695 718 695 718 0.90
17 22 0.71 1.9e+02 5.2 0.6 2 21 1022 1041 1021 1042 0.90
18 22 0.031 8.1 9.4 1.8 1 23 1093 1116 1093 1116 0.92
19 22 1.6e-06 0.00041 23.0 3.3 2 23 1123 1144 1123 1144 0.98
20 22 1.4e-05 0.0038 19.9 2.3 1 23 1150 1172 1150 1172 0.98
21 22 0.017 4.5 10.3 2.6 1 23 1180 1202 1180 1202 0.98
22 22 0.17 45 7.1 5.7 1 20 1208 1227 1208 1229 0.94

Sequence Information

Coding Sequence
ATGGAAAAATCAGTTAATCAAGATTGTGAAACCTTCAGTTTATTAACAATACCACTAGAAGCTTTGCAAGGATACATTGAGCCATTAACTGTAACACAGAATGTactgattaaaaattttgcacaagaCGGAATCGAgttGTTAAATGGCACTGGATCAATGCAAAGCGGTAATAGCGAGAGCTATATTATCGAATCAGTTAATAAACGgaagaataataatatttataatcaAGATCATATAGTAGTAAAatcaatagttaaaaataacaaaaccaatCAAGATGAAGTAcgatatttaaaatgtaaagtagCCAAACCGATGCTAAGAACACCAAATGTTAAAAGAAAACCGAAACCTGATGGCCCTAAAAAATGTCCAATATGTGAAGCATCATTTGAGAAAATCACTCAGTATAGACAGCACATGCAGGAACATCgtaatatgaaaaaatataaatgtgataaATGCAATGAAAGTTATAATGttgaaagtaattttaaagTACATTCAGCAATGCATTTGAAAGGTGAGCCGATGTGTCCGATTTGTGATAGGAAGTTTCAGAGATTGGCTAGTTTGAAATCGCATTTGATTGTACATCAAGTTGAGGAGACTGTTAGTTGTCATGAGTGTTTGGCTGAGTTTGATAAAGAGGAGGAATTGAATGAACATCTGCAGGTTCATAAAAAGGAAGTGGTTAATGTGAATGTGAAACATTCAGAAATTCCGTTTGTATGTTCCTATTGTGATTATTTGTTCCATGATGCTGAAAAATATAAGGAACATATAGCCCTACATATGAAGgcaaaaaaaatggtaaagcaCAGGATGAAAAGAAGAACTATATTAAGTCGTGAATATCCTCATAAATGTGATGAATGtacaaaatctttttcaaagCTATGTTTGTTGGAAAGACATAAACGTATTCATACTGGAGAAAAACCATATGTgtgtCACATATGCAACAGTTGCTTTAGTCAGAAAGGAACACTACACATTCACCTCAACAAACACAATGGAAAGAAACCCTTTGAATGTATGTTCTGTTCAGCAAGGTTTTCCCAAAAAGgTAATTTGAGAGTGCATTTAGACAAAACTCACACTGCAGGTCAGCCAGGTGAAAAAGTATACAAATGCACTCATTGCacatgcattttcaaaaaagtttcatcTTTAAACGGCCACGTCACAAGAGTCCATAAAACCACTTTAAAAGAAGGCAACATTTCAGTACTGATGGatcaattaaaagatttaaataaacaatgtgCTCCGATtataacaactacaaaacatgGTACTACTATAACAATAGAAAAGGACAACAATAGTTTAGGAGAAGAAAATCTAGTAAAATTAGCAGAAGCTAGTTTGGATGGTACTATTAGAAGATATGTAGTTAGGCAGAGAGAAGTTGGTGATATTCGATGgtatatttgttctttttgtaataaagaGTTTAAAAAACCATCGGATTTAATTCGGCATATTAGGATTCATACAAAGGAACGGCCATTTCAATGTATGGATTGTGGTCAGAAATTTTCTCATAAATCAACTTTAAAGAATCACTCGGCTGTACATACAAAACGCAATTACGAATGtgatatttgttataaaagattCACATCTGTTCGCGTATTAAATGCCCATTTGAGAAAGCACACGGCAAAAAGGCCCGTTCAACAACCACCTGAAGCCAAGTTGGATGTGACAGTAGTTATGAAACAACCGATGATGGAAACAGAAAATGGTGTATTTCCTGTACCTGCTCCAAAACCAAAAATACCTTTTGCAACGATGGAAGAATATAAAGATCGTCCATTTAAATGCAAACATTGTCAAGcggtgtttttaaaaaatgtacatctCAAACGACACATGTCGACTCATACTGGGATTAAAGAATTTTCATGTGAATTGTGTAATAAgcAATTCTCAACCTCATATGGGGTAAAAGAACACATGAATTACCATACGAAAACGAAAAACTACGAATGCAAACAGTGCAAGAAGAAATTCTACACGAATTCAATTCTAAAGCGACATACCATGTCGCATGCTGCTCAAAAACCGTACATCTGTCCTTACTGCAAGAAACGCTTCAAATTACCACTATTCTGTCGAAAGCATATTAAACAACTGCATCAAAAAGAACTTGAAGACTCGcTTCTTGCTATGTCCGAAACTGGTGAATTAAGTTATGATCcgaaaattatagacctatcGGATGCAATAAGTGATGATGCTTTTAGTgatataaatcttattaatagtTCAGGAATTGAAGATATCATGCCACCAATGCAAACGTATAATAATTTATCCACggttaatgataaaattatcaataaggAATCTTTTACTATAACTGAGGCATGTAAGGTTTTGGAAGAAGAGAGATTAGCGCTTGCAAAGCAAGCCGAAGAAGCACAAATGCCACCACCTCCGCCAACTCCGccacctcctcctcctcctgAGCCTCCACAAAAGGAACCTTCTTCTTATATTGATGTTAGTCAGTTATCCATGGAAAATATTTACATCACTTCTGAGGATTTGCAAATGTTGAGTACTTCTAACGTTAATTCATGGTTGCCACAATTGAAATTGGAGAATACAGATCCACTTCTTCTCAGCTCAATAAATGAACTTCAAGAGAACAACATATTGTATCCACTAGATCCATCACAAGGTGACACCGATCCTGATTATCCCAATGATGGTCAAAACTACGATACATTCAACCCTAGCTTAGTATTCAATACAGCCATAACTGATCTACCTCAAAATATGATCATAACAAATGATAGAGATCATAGTGATAAAAATTACACCAATGAACAAATTGACTTGGAGCTGAATCAAATAGCGACACAAAAAGTAGATAACACTATGGTTGATAATCTGATTATTCTAAATAATGATGTTCATAAAccggaaataaattattttaatataaatttgaatgaTTATACCGATATTAATGCATTGAATTTACCAGCTAATGCATCAATTGGGAAAGTAATGCAACCAATGGAGAGCGATGAAATTATTATGTGTTCAATATGTAAAAGCACTTTTACTAAGGTTGATGAGTTACACGGACATGTTTGTATTTTACCAGTTAGTGAATCGTtaaattgtgatgttgatattCATCAGAGTCATCCAGATATTGAAGAAATTGAAGctgAACCTGAAGTATCTATTGAAATATCCCAGAGAAAAAGAAAGACTCAGGTTAAGCCAACTCCACCAAATGAAAAGTTTTCTTGTGTGCATTGTGAGAAGGAATTCCAGTTTAAGTCGGCTATGTTGAGACATGTTTCGgctaaacataaagaaactattaataatacttGCACTTATTGTGAgaagaaatttaagaaaagatCGGATTTGgaaaGACATCTAAGAACACATACAGGTGAAAAACCATTTCCTTGTGATAAATGTGAGAAaaagttttcattaaaatccacaCTAATGTCACATTATCGCACTCACAATCCTGTCGTAAATAAAGATTTCAAGTGTCTTGTCTGTAATGCATTTTTCAGTTGTAAATCAAGTTTGAAAGCTCACACATTAATACACTCAGataagaaAGATTTTTGTTGCGAGTATTGTTCAGTGAAATTTAGAACGGCACATCACAGAAAGAATCATATGGTTAAATGCAAAGTGAAGAATAAAACGtacaaaactagtaaaattaCTTTGCAGAATTTACAATCTTTGTTATTGGAAAATCATTTGAATCAACCACAAGAGATTATTATGCACGAGCCGGTTTATGAACAAGAAACTCCAGAAAATCAAGAGGtatttattctttatatttatgttaactGCTATGTGGTACATAGGTAA
Protein Sequence
MEKSVNQDCETFSLLTIPLEALQGYIEPLTVTQNVLIKNFAQDGIELLNGTGSMQSGNSESYIIESVNKRKNNNIYNQDHIVVKSIVKNNKTNQDEVRYLKCKVAKPMLRTPNVKRKPKPDGPKKCPICEASFEKITQYRQHMQEHRNMKKYKCDKCNESYNVESNFKVHSAMHLKGEPMCPICDRKFQRLASLKSHLIVHQVEETVSCHECLAEFDKEEELNEHLQVHKKEVVNVNVKHSEIPFVCSYCDYLFHDAEKYKEHIALHMKAKKMVKHRMKRRTILSREYPHKCDECTKSFSKLCLLERHKRIHTGEKPYVCHICNSCFSQKGTLHIHLNKHNGKKPFECMFCSARFSQKGNLRVHLDKTHTAGQPGEKVYKCTHCTCIFKKVSSLNGHVTRVHKTTLKEGNISVLMDQLKDLNKQCAPIITTTKHGTTITIEKDNNSLGEENLVKLAEASLDGTIRRYVVRQREVGDIRWYICSFCNKEFKKPSDLIRHIRIHTKERPFQCMDCGQKFSHKSTLKNHSAVHTKRNYECDICYKRFTSVRVLNAHLRKHTAKRPVQQPPEAKLDVTVVMKQPMMETENGVFPVPAPKPKIPFATMEEYKDRPFKCKHCQAVFLKNVHLKRHMSTHTGIKEFSCELCNKQFSTSYGVKEHMNYHTKTKNYECKQCKKKFYTNSILKRHTMSHAAQKPYICPYCKKRFKLPLFCRKHIKQLHQKELEDSLLAMSETGELSYDPKIIDLSDAISDDAFSDINLINSSGIEDIMPPMQTYNNLSTVNDKIINKESFTITEACKVLEEERLALAKQAEEAQMPPPPPTPPPPPPPEPPQKEPSSYIDVSQLSMENIYITSEDLQMLSTSNVNSWLPQLKLENTDPLLLSSINELQENNILYPLDPSQGDTDPDYPNDGQNYDTFNPSLVFNTAITDLPQNMIITNDRDHSDKNYTNEQIDLELNQIATQKVDNTMVDNLIILNNDVHKPEINYFNINLNDYTDINALNLPANASIGKVMQPMESDEIIMCSICKSTFTKVDELHGHVCILPVSESLNCDVDIHQSHPDIEEIEAEPEVSIEISQRKRKTQVKPTPPNEKFSCVHCEKEFQFKSAMLRHVSAKHKETINNTCTYCEKKFKKRSDLERHLRTHTGEKPFPCDKCEKKFSLKSTLMSHYRTHNPVVNKDFKCLVCNAFFSCKSSLKAHTLIHSDKKDFCCEYCSVKFRTAHHRKNHMVKCKVKNKTYKTSKITLQNLQSLLLENHLNQPQEIIMHEPVYEQETPENQEVFILYIYVNCYVVHR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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