Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010742.1:193412-200666[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0014 0.38 13.6 0.3 1 23 157 179 157 179 0.97

2 11 3.3e-07 8.8e-05 25.1 2.2 1 23 185 207 185 207 0.99

3 11 2e-06 0.00052 22.6 2.5 1 23 213 235 213 235 0.98

4 11 3.8e-05 0.01 18.6 1.3 1 23 244 266 244 266 0.96

5 11 2.4e-05 0.0063 19.2 0.2 2 23 273 294 272 294 0.95

6 11 3.3e-09 8.8e-07 31.4 1.3 1 23 300 322 300 322 0.99

7 11 9.2e-07 0.00024 23.7 0.8 1 23 328 350 328 350 0.98

8 11 2.5e-06 0.00066 22.3 2.1 1 23 356 378 356 378 0.98

9 11 0.00017 0.043 16.6 0.2 1 23 384 406 384 406 0.94

10 11 1.1e-06 0.0003 23.4 0.1 3 23 414 434 413 434 0.98

11 11 3.8e-07 0.0001 24.9 0.6 1 23 440 462 440 462 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0014	0.38	13.6	0.3	1	23	157	179	157	179	0.97
2	11	3.3e-07	8.8e-05	25.1	2.2	1	23	185	207	185	207	0.99
3	11	2e-06	0.00052	22.6	2.5	1	23	213	235	213	235	0.98
4	11	3.8e-05	0.01	18.6	1.3	1	23	244	266	244	266	0.96
5	11	2.4e-05	0.0063	19.2	0.2	2	23	273	294	272	294	0.95
6	11	3.3e-09	8.8e-07	31.4	1.3	1	23	300	322	300	322	0.99
7	11	9.2e-07	0.00024	23.7	0.8	1	23	328	350	328	350	0.98
8	11	2.5e-06	0.00066	22.3	2.1	1	23	356	378	356	378	0.98
9	11	0.00017	0.043	16.6	0.2	1	23	384	406	384	406	0.94
10	11	1.1e-06	0.0003	23.4	0.1	3	23	414	434	413	434	0.98
11	11	3.8e-07	0.0001	24.9	0.6	1	23	440	462	440	462	0.97

Sequence Information

Coding Sequence: ATGATTATTACAGATGCAACTTTAACATTAACAGGAATACCCATGTTGCACAAAGAGCCTACATTTAAAATACGCTGTTTAATACCAGAATTGGAAAACATTGGATTGTCATTTGATGAAATTCAGAAAATATCACAATCtagCACAAGTAATTGCACTTATTATGATTACGATTATTCTCGATTGAAGTTATTGGATTATTATGAAATGTTGGAATTTATTACATTGGAACCAAAACCGGCTCTTATTAAATGTAATGAATGTAAGATGGATGAAAATACTGAACACAGTAGTATTTATAAAGATGTATTgTTATATTGCATGAAGGATGTTGAAAATGCTATCAATATTGCTCCTTTTCTTGGAATGGCAATTGGGTACACGTTTTTTGTACCATTTGGTGATATtgatAGTGTAGAGAATGATTTGACTTCATTTTTGGATGAAGATCCAGGTCCACCTTTACCATTTCCTTGTAGTGAATGTTCGCAGTCATTTAATGCCGAATATGATTTACAATTACATTCAAGTACGCATACGAAATCTGGAGAATATGTTTGCAGTAAATGCAATAAACGATTTGCAAATAGACAAATGTTGAACAGGCATATAAAAACTCATATGTTGAATAAGCCACATGTTTGTAGAGAATGTGGTAAGGGATTTGCCGAATCGCATGCTTTAACTAAACACATGAGACGACATACTGGTGAGCCTCGTGAGAAAAAACATTTCTGTAATGTGTGTGGGCAAGGatttacagaaccattttatttaaatgtgcaTTTGCGTAAACATACTGGTGAGCGTCCGCTGATGTGTTCTGCTTGTGGGAAATCATTTGCAGATCCACGTTCCTTAAAAGCACATAATATGACTCATACTGGAGAGAAACCTTATAAGTGTAATTATTGTGGGAAAGGTTTCAGCCAAAGCATGAACTTAACAAAGCATATAAGAGTCCATACTGGTGAGAAACCGTACGTTTGTGCTCAATGTGGGAAACGCTTTACACAATCGTCCAGTCTCGACAAACATTCGCGAATTCACAGTGGAATCAAACCATATGCTTGCGACAAATGTCctaaaagattcACTGAAAAAGGCACTCTCGTTCATCATCAGCGCACACATACAGGAGAAAAACCATACATTTGTGCACAATGCGGACAGGCGTTTGCTAGTAGTTCCGAATTAAAATTGCACGATAGAAAACATAGCggcgttaaaaaaaatatatgcacgTTATGCGGAAAAGACTTTGCAACACCGAATAATTTAGTCGTTCATATGAGATCTCATAGTGGGGAGAAACCATTCGCCTGTGATATATGTCAAAAAGCATTTTCAGATAAAGGTTCACTTAAGAAGCATACAAAAGTGCATAAGAATAAAGAAGGAATCGATGGATTAGTGCTGGAAAACAATGTGCAATTGGATTCATTTCATAATATTATggacaataaaatacaaattggattttattaa
Protein Sequence: MIITDATLTLTGIPMLHKEPTFKIRCLIPELENIGLSFDEIQKISQSSTSNCTYYDYDYSRLKLLDYYEMLEFITLEPKPALIKCNECKMDENTEHSSIYKDVLLYCMKDVENAINIAPFLGMAIGYTFFVPFGDIDSVENDLTSFLDEDPGPPLPFPCSECSQSFNAEYDLQLHSSTHTKSGEYVCSKCNKRFANRQMLNRHIKTHMLNKPHVCRECGKGFAESHALTKHMRRHTGEPREKKHFCNVCGQGFTEPFYLNVHLRKHTGERPLMCSACGKSFADPRSLKAHNMTHTGEKPYKCNYCGKGFSQSMNLTKHIRVHTGEKPYVCAQCGKRFTQSSSLDKHSRIHSGIKPYACDKCPKRFTEKGTLVHHQRTHTGEKPYICAQCGQAFASSSELKLHDRKHSGVKKNICTLCGKDFATPNNLVVHMRSHSGEKPFACDICQKAFSDKGSLKKHTKVHKNKEGIDGLVLENNVQLDSFHNIMDNKIQIGFY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -