Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010741.1:47272798-47281135[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 1.6e-06 0.00043 22.9 1.5 1 23 200 222 200 222 0.99

2 12 0.00014 0.037 16.8 2.8 1 23 228 250 228 250 0.96

3 12 5.7e-08 1.5e-05 27.5 1.9 3 23 258 278 256 278 0.96

4 12 1.5e-05 0.004 19.9 2.3 1 23 284 306 284 306 0.97

5 12 2.2e-06 0.00057 22.5 0.7 1 23 312 334 312 334 0.98

6 12 8.1e-05 0.021 17.5 2.3 1 23 340 362 340 362 0.98

7 12 6.5e-08 1.7e-05 27.3 0.8 1 23 368 390 368 390 0.97

8 12 4.5e-06 0.0012 21.5 0.1 1 23 396 418 396 418 0.98

9 12 1.9e-07 5e-05 25.8 1.2 1 23 424 446 424 446 0.99

10 12 7.6e-08 2e-05 27.1 0.8 1 23 452 474 452 474 0.99

11 12 1.3e-06 0.00035 23.2 3.2 1 23 480 502 480 502 0.97

12 12 5.7e-07 0.00015 24.3 0.5 1 23 508 530 508 530 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	1.6e-06	0.00043	22.9	1.5	1	23	200	222	200	222	0.99
2	12	0.00014	0.037	16.8	2.8	1	23	228	250	228	250	0.96
3	12	5.7e-08	1.5e-05	27.5	1.9	3	23	258	278	256	278	0.96
4	12	1.5e-05	0.004	19.9	2.3	1	23	284	306	284	306	0.97
5	12	2.2e-06	0.00057	22.5	0.7	1	23	312	334	312	334	0.98
6	12	8.1e-05	0.021	17.5	2.3	1	23	340	362	340	362	0.98
7	12	6.5e-08	1.7e-05	27.3	0.8	1	23	368	390	368	390	0.97
8	12	4.5e-06	0.0012	21.5	0.1	1	23	396	418	396	418	0.98
9	12	1.9e-07	5e-05	25.8	1.2	1	23	424	446	424	446	0.99
10	12	7.6e-08	2e-05	27.1	0.8	1	23	452	474	452	474	0.99
11	12	1.3e-06	0.00035	23.2	3.2	1	23	480	502	480	502	0.97
12	12	5.7e-07	0.00015	24.3	0.5	1	23	508	530	508	530	0.99

Sequence Information

Coding Sequence: atggCATTTGAAACAGtgcatataacaaaaatatgtcgCACCTGTTTGTCTGAAGATCAAAGTATGCGTTCTGTGTTTACAATGGATGAAAGTTTAGGTGAAACAGCAAGATTGTTTGAAATGTTAATGTCCTGTGCTTCAGTGCAGgttttggaAGGTGATGGCTTACCAGATCAAGTTTGTTTACAATGCGTGCACTACATCACAAGAGCGTATTCATTTAAACAGTTATGTGAACGGAGTGACCACACGCTCAGAGAACTTTTGTGTAAATCAGAATTAACTTATTTAGAAGAACTGAAACCATGTCATACACAAATAATAACACAACCACAGATTGAAACAGTTGTTTCAATTGAACCACCACCTCTAACTGCCTTTAACATGATTGATGCTGCTCTAGATTTGAAACCTATTGAAGCAGCTATCGAACAAGATCTTAAAACACAAGCAATAGATTTTCCAATTATAGAATCAGATAATGATGATATAGGAGCTGATAATATTGGTGCAAGAGATGATATCAATGCAGACCTTcaacaaaatagaaaagaacctcggaagaagaaaataaaagatgATACAGATCAACCAATATATCCATGTGAGGAATGTACATATTGTTTTACTACAGTAGGCGATCTTAAAGTACATCAGAGAACACATCCAAAAGTTACTAggcatatttgtaaaatttgcaatcaaGGTTTTGCAAGTGCAAGCACATTATGTCGACATTCAaaggtCCATGAAAGTGCAAAACGACATTTATGTAGTGAGTGTGGTAAAGGTTTTTCACGTTCCGATGATCTCACGAGACATTTGAGAACTCACACTGGTGAAAAGCCATTTCATTGTAAATTATGCGGTAAGAGTTTTGCGCAATCATTTCGATTATTAGAACACATGCGTGCTCATGctaatgaaaaaagttttgtatgttCTGTTTGTGGGAAAGCATTTTCACGATATACAAGTTTATCAGCACACAATAAAACACATACAGGAATTAAAAGTCATCAATGTTCCGTGTGTGGAAAAAgATTATGTGGATCGGGATCTCTAGCAATGCACATGAAGACACATACGGGCTTGAAAGATCACATTTGTCCATTTTGTGGAAAAGGTTTTACTACACCCAGCAATTTAATCATACATAAACGCACACATACaggTGAACGTCCATATATCTGTAATGTATGCGGAAAAGGTTTCCCAGATCCATCCAGGCTTACAGTACATTCACGATCTCATAGTGGAGAAAAACCATATGTATGTAGTGTTTGTGGACGTGGATGTGTTAGttcttcacaattaaaaaaacacatgcgAATACACACAGGTGAAAAACCTTATCAGTGCCATTTATGTCCAAAAGCATTTCCAAGATCGGAAGATTTAAGAATTCATATAAAAACACATACAgGGGATAGAAACCACATCTGccatatttgtaaaaaaggcTTCTACCAAGCATCAACTTTAAAAGTTCATATGCGTATACATACTGGCGAGAAGCCATATACTTGTAATATATGTGATAAAGCATTTTCACAAACGGGGCCTTTGTCTACGCATATGAAAACTCACTGA
Protein Sequence: MAFETVHITKICRTCLSEDQSMRSVFTMDESLGETARLFEMLMSCASVQVLEGDGLPDQVCLQCVHYITRAYSFKQLCERSDHTLRELLCKSELTYLEELKPCHTQIITQPQIETVVSIEPPPLTAFNMIDAALDLKPIEAAIEQDLKTQAIDFPIIESDNDDIGADNIGARDDINADLQQNRKEPRKKKIKDDTDQPIYPCEECTYCFTTVGDLKVHQRTHPKVTRHICKICNQGFASASTLCRHSKVHESAKRHLCSECGKGFSRSDDLTRHLRTHTGEKPFHCKLCGKSFAQSFRLLEHMRAHANEKSFVCSVCGKAFSRYTSLSAHNKTHTGIKSHQCSVCGKRLCGSGSLAMHMKTHTGLKDHICPFCGKGFTTPSNLIIHKRTHTGERPYICNVCGKGFPDPSRLTVHSRSHSGEKPYVCSVCGRGCVSSSQLKKHMRIHTGEKPYQCHLCPKAFPRSEDLRIHIKTHTGDRNHICHICKKGFYQASTLKVHMRIHTGEKPYTCNICDKAFSQTGPLSTHMKTH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -