Basic Information

Insect: Tachinus rufipes
Gene Symbol: -
Assembly: GCA_963932245.1
Location: OZ010746.1:10492274-10502098[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1.5e-07 3.9e-05 26.2 1.5 1 23 116 138 116 138 0.99

2 15 0.00091 0.24 14.2 0.1 3 23 149 170 147 170 0.96

3 15 4.6e-06 0.0012 21.5 0.0 2 23 187 208 186 208 0.96

4 15 0.024 6.3 9.8 6.2 1 23 214 236 214 236 0.95

5 15 7.8e-06 0.0021 20.7 1.4 1 23 244 266 244 266 0.98

6 15 1.2e-08 3.1e-06 29.7 0.6 1 23 271 293 271 293 0.98

7 15 0.0055 1.4 11.8 5.1 1 23 299 321 299 321 0.98

8 15 2.6e-06 0.00069 22.2 0.7 1 23 327 349 327 349 0.98

9 15 0.00026 0.069 16.0 1.7 1 23 355 377 355 377 0.97

10 15 6.3e-07 0.00017 24.2 1.8 3 23 385 405 383 405 0.96

11 15 7.6e-08 2e-05 27.1 0.1 2 23 411 432 410 432 0.97

12 15 6.2e-06 0.0016 21.1 0.7 1 23 438 460 438 460 0.98

13 15 2.2e-05 0.0058 19.3 0.2 1 23 466 488 466 488 0.98

14 15 6.1e-08 1.6e-05 27.4 0.8 1 23 494 516 494 516 0.99

15 15 0.0053 1.4 11.8 0.1 1 20 522 541 522 542 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1.5e-07	3.9e-05	26.2	1.5	1	23	116	138	116	138	0.99
2	15	0.00091	0.24	14.2	0.1	3	23	149	170	147	170	0.96
3	15	4.6e-06	0.0012	21.5	0.0	2	23	187	208	186	208	0.96
4	15	0.024	6.3	9.8	6.2	1	23	214	236	214	236	0.95
5	15	7.8e-06	0.0021	20.7	1.4	1	23	244	266	244	266	0.98
6	15	1.2e-08	3.1e-06	29.7	0.6	1	23	271	293	271	293	0.98
7	15	0.0055	1.4	11.8	5.1	1	23	299	321	299	321	0.98
8	15	2.6e-06	0.00069	22.2	0.7	1	23	327	349	327	349	0.98
9	15	0.00026	0.069	16.0	1.7	1	23	355	377	355	377	0.97
10	15	6.3e-07	0.00017	24.2	1.8	3	23	385	405	383	405	0.96
11	15	7.6e-08	2e-05	27.1	0.1	2	23	411	432	410	432	0.97
12	15	6.2e-06	0.0016	21.1	0.7	1	23	438	460	438	460	0.98
13	15	2.2e-05	0.0058	19.3	0.2	1	23	466	488	466	488	0.98
14	15	6.1e-08	1.6e-05	27.4	0.8	1	23	494	516	494	516	0.99
15	15	0.0053	1.4	11.8	0.1	1	20	522	541	522	542	0.96

Sequence Information

Coding Sequence: ATGAGTAAAATATGCAGAATTTGCATGAATATTATAGACACAAATTACATATCAATTTTTAGCACTAATGGAAATAACGATGTCATATTTGCAACTAAAGTTATGACACTTGCTTCAGTACAggtCAATTATCAAGATGGTCTACCTCAGGCGATGTGTAAAATATGTACAGATCATATAGAAAATGCgtacttattaaaattacaatgcGAACAGTCGGATAATACTTTACGTAGATATATTAGTACTGATTCTAAAATAGATAAGAATAATTATATTTGCGATAATATTAACGAGACTTTTGAGGATGATCATTTTCCTGATATTGAAAGTACAAGTGAAGAGTATAAATGTGAGCTATGTGATAAAACCTTTGTTAaatctaatcaattaaaaatgcatatgCGTgttcacaaaaaagaaaaatgtgatGAAATAAGTATATGTACGGTATGTAATGAAAAATTTGAAGGTAACGACAAATTAAtcgaacatatgttaaaagaacaTACTGAAAAAGAAGCTAGTGAAAATCACGATGATAAAAGCAAACGATTGATTTGTAATATATGCAATAAGGTTTACGTAAAAGCGAGTAATTTAGTAGCACATATGGGTACACATACGGGTAATAAACCATACGAATGTAAAACATGCGGAAAATGTTTTACTCAAGGTAGGGCGTACGCGTGTCATAAGCGTACACATGATAACGACACAGATAAGccgcataaatgtaatatatgcCCAAAACGATTTGCTGAAGAATCACAGTTGAATAATCATGTAAAGAATCATACAGagcaaacttttgtttgtaatgtTTGCGGGAAGAGTTATTCGAATTCGGGGAATTTGAAATCGCATATGAGGTTGCATAGCGGAGAAACGCCATATGAGTGCCATATTTGTAATAGGAAGTTTGCACAAAGTAACGCTCATTCGTATCATATGAAAACGCATTTAGgcGAAAAACCATTTAGTTGTGAATTATGTTCAAAAGCATTTACTACAAATGGGCAACTTATTAACCATCGACGGTTGCATACAGGCGAAAGACCATTTGCTTGCACAATGTGTCCCAAAAGGTTTACCCAAAAAGTAGCACATACTGTACATATGATGACACATATTGGCAACAAACCACATTTATGTAGCATCTGTGGCAAAAAATATTCGCAAAATAGTCAACTGGTTGATCACATGAGATCGCATACaggTGAAACTTTACAATGTAATATATGCGGAAAAGGATATTCAACAGCTGGAAATTTAGCAGCCCATATGAAAACACACAGTGGAATCAAACCCCATGTTTGTGCAATATGCAATAAAGCCTTCTACGTTGctaataaattagcaaaacatATGAGGACCCACACCGGTGAACGTCCATACGCCTGTACCATATGCCCTAAACGCTTTAAAAGTTCGGACGTTATGAAAATTCACGTGCGAATACATACTGGGGAGAGACCATACCGCTGCGGTGTTTGTAGCAAAGGTTTCACGAACAATTCACAACTTACAGTGCATATGCGTTCTCATACTGGACAAAGACCATATGTGTGTAGTTTATGTTATCAAGGTTTTACTACGTCTGCAAGTCTTAGTGTGCATACGGTAAATTGCGTGAATGGGCCAAGACGGGTTACTGAAAATACGGTGTATTCTAGTGTTGATTATGATGGTACAAagaaagattttaatttataa
Protein Sequence: MSKICRICMNIIDTNYISIFSTNGNNDVIFATKVMTLASVQVNYQDGLPQAMCKICTDHIENAYLLKLQCEQSDNTLRRYISTDSKIDKNNYICDNINETFEDDHFPDIESTSEEYKCELCDKTFVKSNQLKMHMRVHKKEKCDEISICTVCNEKFEGNDKLIEHMLKEHTEKEASENHDDKSKRLICNICNKVYVKASNLVAHMGTHTGNKPYECKTCGKCFTQGRAYACHKRTHDNDTDKPHKCNICPKRFAEESQLNNHVKNHTEQTFVCNVCGKSYSNSGNLKSHMRLHSGETPYECHICNRKFAQSNAHSYHMKTHLGEKPFSCELCSKAFTTNGQLINHRRLHTGERPFACTMCPKRFTQKVAHTVHMMTHIGNKPHLCSICGKKYSQNSQLVDHMRSHTGETLQCNICGKGYSTAGNLAAHMKTHSGIKPHVCAICNKAFYVANKLAKHMRTHTGERPYACTICPKRFKSSDVMKIHVRIHTGERPYRCGVCSKGFTNNSQLTVHMRSHTGQRPYVCSLCYQGFTTSASLSVHTVNCVNGPRRVTENTVYSSVDYDGTKKDFNL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -