Basic Information

Insect: Tachinus rufipes
Gene Symbol: ZEB2
Assembly: GCA_963932245.1
Location: OZ010742.1:117627083-117632021[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.8 1.3e+03 2.6 0.6 2 23 15 37 14 37 0.87

2 17 1.3e-05 0.0034 20.1 2.8 3 23 45 65 43 65 0.97

3 17 1.2e-05 0.0033 20.1 1.1 1 23 72 94 72 94 0.96

4 17 7.2e-05 0.019 17.7 0.6 1 23 100 123 100 123 0.93

5 17 8.9e-05 0.023 17.4 0.1 1 23 129 151 129 151 0.98

6 17 3e-05 0.0078 18.9 2.0 1 23 157 179 157 179 0.98

7 17 6.1e-09 1.6e-06 30.5 1.2 1 23 185 207 185 207 0.99

8 17 9.6e-06 0.0025 20.5 0.5 2 23 290 311 289 311 0.96

9 17 6.9e-07 0.00018 24.1 2.1 1 23 318 340 318 340 0.98

10 17 0.27 72 6.5 1.1 2 23 344 366 343 366 0.94

11 17 4.6e-05 0.012 18.3 1.2 2 23 373 394 372 394 0.97

12 17 3.6e-05 0.0095 18.7 2.0 1 23 400 422 400 422 0.96

13 17 0.00012 0.03 17.1 0.9 1 23 428 451 428 451 0.93

14 17 3.1e-08 8.1e-06 28.3 0.2 1 23 457 479 457 479 0.98

15 17 2e-05 0.0054 19.4 1.4 2 23 486 507 485 507 0.96

16 17 4e-09 1.1e-06 31.1 0.8 1 23 513 535 513 535 0.99

17 17 0.017 4.5 10.2 8.0 1 23 541 564 541 564 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.8	1.3e+03	2.6	0.6	2	23	15	37	14	37	0.87
2	17	1.3e-05	0.0034	20.1	2.8	3	23	45	65	43	65	0.97
3	17	1.2e-05	0.0033	20.1	1.1	1	23	72	94	72	94	0.96
4	17	7.2e-05	0.019	17.7	0.6	1	23	100	123	100	123	0.93
5	17	8.9e-05	0.023	17.4	0.1	1	23	129	151	129	151	0.98
6	17	3e-05	0.0078	18.9	2.0	1	23	157	179	157	179	0.98
7	17	6.1e-09	1.6e-06	30.5	1.2	1	23	185	207	185	207	0.99
8	17	9.6e-06	0.0025	20.5	0.5	2	23	290	311	289	311	0.96
9	17	6.9e-07	0.00018	24.1	2.1	1	23	318	340	318	340	0.98
10	17	0.27	72	6.5	1.1	2	23	344	366	343	366	0.94
11	17	4.6e-05	0.012	18.3	1.2	2	23	373	394	372	394	0.97
12	17	3.6e-05	0.0095	18.7	2.0	1	23	400	422	400	422	0.96
13	17	0.00012	0.03	17.1	0.9	1	23	428	451	428	451	0.93
14	17	3.1e-08	8.1e-06	28.3	0.2	1	23	457	479	457	479	0.98
15	17	2e-05	0.0054	19.4	1.4	2	23	486	507	485	507	0.96
16	17	4e-09	1.1e-06	31.1	0.8	1	23	513	535	513	535	0.99
17	17	0.017	4.5	10.2	8.0	1	23	541	564	541	564	0.96

Sequence Information

Coding Sequence: ATGTTACGTCATGAAAATCCACCTGAACGAAAAAGGACgcttaaatgtttatattgcgATTATATACCAGAAAGCTCGGGGAAATTAGCTAAACATAATCAACACGAACATGGTGATATGAAGAATGTTATATGCACCATATGCAATAAAAGGTTTATGAAAAAGGATCATCTTAGAGTACACATGTTCACACATAACAAATCAGAAAGGCAGCATACTTGCGAATATTGTGGAAAAACATTAGCCAATGCTCAAAATCTTAAGAAACATTATGTTGTTCATACGGGTGAAAAACCATATGCATGTGATAAGTGTGACAAACGATTTCCACAATATGCAAGTTTACGCAGTCACAAAATATATGTACATTCTGATAAGCGTGATTTTGTATGTAACGAATGTGGTGCAACTTTTAAACTAATGGCTGGTTTAAAGTCACATTTAAGATTGCACAAGGGAATCAAACCACATAAATGTACAGTGTGTGGTATTGCTACCAGAGATTTGAGTGATTTGAAAGTGCACATGAAGCATCATAATGGAGAATACGAATATGAATGTGATGTATGCGGGAAGAAATTTGTTCGGAAATCGAGTTTAAAAACGCATATGATGACTCATACAGGAGAGAAACCTTATGTCTTAAAGGAAGAAAGTTTAACCAATTCAGAAAATAGCAACAATGCCATCCAATTGGAGTGCGATGAAGACTTAAACAGATTAGAAAACGAcgtaaatgtttttgaaagtgataATGAATTTAAAGATCATAATTCAGATGAATTTgaagttgaagaaattaaaatgatttctgctgaaaaagcaaaaacagacGACGCTATTGATAATATAAAGTTAGCAAAATTGACTTGCACGATATGCGGTAAAGTATTCAAATggagacaaaatttaaaagcgCACATGTTACAACACGAGGAAAAGGAAGGATCATTTCCTTGCTCaatatgcaacaaaatattcaaacgGAAACAATATTTGAGGTCGCATATGTTACGCCATGAAAAGCTTAAATGTTCACATTGTGATTATATACCAGAAACTTCTGGGAAACTAGCGAAACATACCCAATATCAACATGCCGATAAGAAGAATATTGTGTGCACCATatgcaataagaaatttatgaaaaaacgcGCTCTTCATGCCCACATGTTGGTACATACATCAGAAAAGCAGCATACTTGTGAATATTGcggaaaaacttttttaactgcTCAAAACCTTAAACGTCATTATGTTATCCACACGGGCGATAAACCATTTGCTTGTGATATGTGTGATAAACGATTTTCTCAATACGCAAGTTTAAGCactcataaattatatttgcattcTGATAAGCGTGACTTTGTATGTAATGATTGTGGTGCTACTTTTAAACGCAGTAGTGCTTTAAATGCACATGTAAGAACACACAAGGGTATAAAACCATGTAAATGTTCAGTGTGTGGTACTGCTGCTAGAGATGCAAGCTCGTTGAAAAGACATATGAAACAACATACTGGGGAATTCGATTATGAATGTGATGTATGCGGGAAGAATTTTATTCGGAAATCAAGTTTAAAGATACATATGAGGACGCATACAGGAGAGAAACCACATGTTTGTCATTTGTGCGAGAAAAGGTTTAGTCAAGGACACTGTTTAAGATCTCATTTGGCAACCCAACATAAGTGGTCTGATGCCTGGAGACTACGAGGTTTTGGCGGATGTAGTCGAAGATACCCTTTAGTGAATGTGAGTTCTGGAACAGGTGATTTGGTTCAACGGGGCCGGTAG
Protein Sequence: MLRHENPPERKRTLKCLYCDYIPESSGKLAKHNQHEHGDMKNVICTICNKRFMKKDHLRVHMFTHNKSERQHTCEYCGKTLANAQNLKKHYVVHTGEKPYACDKCDKRFPQYASLRSHKIYVHSDKRDFVCNECGATFKLMAGLKSHLRLHKGIKPHKCTVCGIATRDLSDLKVHMKHHNGEYEYECDVCGKKFVRKSSLKTHMMTHTGEKPYVLKEESLTNSENSNNAIQLECDEDLNRLENDVNVFESDNEFKDHNSDEFEVEEIKMISAEKAKTDDAIDNIKLAKLTCTICGKVFKWRQNLKAHMLQHEEKEGSFPCSICNKIFKRKQYLRSHMLRHEKLKCSHCDYIPETSGKLAKHTQYQHADKKNIVCTICNKKFMKKRALHAHMLVHTSEKQHTCEYCGKTFLTAQNLKRHYVIHTGDKPFACDMCDKRFSQYASLSTHKLYLHSDKRDFVCNDCGATFKRSSALNAHVRTHKGIKPCKCSVCGTAARDASSLKRHMKQHTGEFDYECDVCGKNFIRKSSLKIHMRTHTGEKPHVCHLCEKRFSQGHCLRSHLATQHKWSDAWRLRGFGGCSRRYPLVNVSSGTGDLVQRGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -