Basic Information

Gene Symbol
Trerf1_1
Assembly
GCA_963932245.1
Location
OZ010743.1:2037131-2170871[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 8.7e-12 5e-08 35.3 0.1 2 46 1226 1270 1225 1270 0.97

Sequence Information

Coding Sequence
ATGCCCAAGAAAGCTTATAGAAGATGCGAAAAAGGAGTTCATGAGCTTGCGGGCGTACGGCTCCCTTTACAGCCGTACCCCGGAGGGCATGCGGTCTTCATGTACAGCACAGCCGCGGACGGCAACGTAACATTACAACTGAAAGAGCAAGATGATCTGGATAGGGGTAGCTTAGCAGCAATGCTCGCACGACTGCAGGACGATGCAACATTTTCCATATCATACGATACCGACATACTTTCCGATGGAAGTATTGACGTGCTACTTGGTACAGGGTCTAGTAATAGTCTTCAGGCTAcagGGGGAACCGACGCAGTGACGGCGACATTCGACCTGTTCGATTCATCAAGTGGGCCCGACCTGACGCTCTCCCCGCAGACCTTCACGAATTCCGCCGAGGCCTTTATCAACGACAACTCTAACAGTCTAGGAGTCCCTACGGAGAGTGACCCAGtttCTTCTACTGATGATAAGAAAGTTCAAGGGAGTGGGTCGGATGTTGTGAAGCTTTCTGTTAAAAGGACGAGACCTAAAGCTGCGTCGCCTAATCGACAAGGTCCTCAACAGTGCCagGTGTGTGCGAAGGTGTTCGGAAACGCATCAGCATTGGCCAAGCACAAACTAACTCATAGTGATGAGAGAAAATACGTCTGTTCGATGTGCGGAAAGGCTTTTAAGCGGCAGGATCACCtaaatggCCATATGTTAACACATAGAAATAAAAAGCCGTATGAATGTAAGGCTGAAGGATGCGGGAAATCGTATTGCGATGCTAGATCGCTGCGTCGACACACAGAGAACCATCACAGCGGCTCTTCATCGTCATCATCGTCGTCCTCATCATCATCATCGTCGTCTTCTACGGTGAACGCTGCGACTACGACGATGTCACCCGCACAAGGAGCAGCATCAGGAGATGCTGCTTCCCCACACGGTTCCAGTTGTATACAATATGCGCCTCCTCCGACAACCACAACGACTACAACGGGAAAAAGCCAATTGCAACAGCTTCTGGCTACCGAACCTGCTAAaagTGGAAATGGTGGTAACAATGATGGGTTGACGAAACAACAACTCGATTTAATTCATCAGATTATGGAGCAAACGCAACGACAGTCGCAAGTACCCGTGCAGAAATCAACGCCGAAACCTGCCGCAAAACCGGCCAGCAAAACTCCTGCCAAAGTTCAAagaactCAACAAAATGCGTCTTCAAAATCAAATGGATCGACAAACAGCCCATCGAACAAGGTGTCCAGTAGTGGTACTCCATCCACCCCTGCAGATAAAAGCAAAACGACGGAACAAAAACCGGTGGAATGTAATCTCTGCCATCGAAAATTCAAGAACATCCCGGCCCTTAATGGCCACATGCGATTACACGGAGGCTACTTCAAAAAGGACGCGGATAATAAGAAATGCGAGAAAAAAGACACCACCGGACCTCCATTACAAACGGCAAGTGTAAGCGTGAGAGCAttgattgaagaaaaaattattaacaagagGATAACGAATCCAGTAGTGACGACTACAACGACGACGGAGACGACGAGTAACAATAACAGTGCCGCCCCTCCGCTCTTCCCATTAACGGTGCATTCCACTGGAAGCGCGGATTTGGATACCAAAATTACTTCATTTGTGGTACCAGCGCCGCCCCAACACACCACGGAGAAATCTCGCAGACATTCCGATGCGGAGGCGTTCACAATGCCACGACCGCCAAGCACCCAACAAGAAGCCGACGCCTTAGCAGATTTAATCCTAAAACGAGAGAAGGTTTCTGTTAAACGTACTACCTCCGATCCGGGCCAACCCTCGCAGATCATACAATTTCAATCAGGCGAAGGTTTTACCTTAGCATACCAATCCGATGATGGCGGGTATTTATCACCCAGCCTACAAGACGAAGTTTTTACCCGTGTACAAGACAGCATGCTTCTACAAAATGTAGACCATCAACAATTAACCTCGATACAATTTCAAACTGATAACCTCCTTCAAGATCAAACAGATATTGCTTTAGATGATTATGCTAATTCCGTAGTACAATCACCATCATACCAATCTAGTCATTCTGTTAATCAGGAATTGCAGGCCGTATTGGATTCCCCATTACCGGAAAGCCTTGCGGAATTCAGTACCTTCCACTCATCAGCAAATTTGGATTTACCATCCCCCGGTTATCACCAAACGCAATCACCACAATTTACTGGATCACCGCATGCTTCAATAGCAACACAATCACCCCTACAATCACCTTTAATTAGGCATGATTCTCCAGGGTTTGCCTATCCGACTCCACCTGCAAGTCATGAAGGGCGCAGCCCTTGTTTTGGTCAGAATTCCATGTTGCCGATGGTTTCACCAAAACAGAATGATTTCGGTGCTGTGATTACAAGAGATTTAGATGAGCCTCCGCAAGCCTCTTCACCGCTATCAGCTGCATTTTTTACTTCAACAATGTCGAGTTCAGCTGCGGTTGAAGAGGCGCTTGAAGAAGTCCTTCCTGGTGAAAGCATAGCGGCTGATGAGTTGTATCCATCTTTAACCAATTCTCCACCACCTCAATCGCCCCTATCAGTTGGTTTAACACCAGTGGCTTCACCTTTAAGTAATATACCAGCAACTTCATCGGTAACTTCACCTCACAACACAGTAACATTTCCAATGTCTCCTCATTACACTCTACAATCACAAATGTTACCCAATTCGGATGATCCTTTACTATCAAGCAGTCCTAAAGATTTTGCCGCTAGGAAGAAATTTGAATTCAACGGACTTCCACTTAAAGTGATCAGCAGTAACGGCCTACTTGATTTAAACAATACGAATTTAACGGGAATTTTGGTGGAATCTAATGGGGAACTTAAATTTATTCAGACTGCTTTTCAAGGgaagaatattttaatgagCGGATCACCAATGCTTACGAATTGTATTAATATCAAGCAGGAACCGGATGTTTCTCGTCCGCAAATGGTTTTAAAATCGCTGCAAATGCCGGCGAAACAAATGGGTGGTCAACggtctaaaattaatattgacaatATTAAGCAGGAGGATTTGAGCGATGTCTTTCTAAGTCCTACAACGGTACCAGCGAGTCCTGTAAGGGCTTCGAGAAAACGTCCAAGAACTGAAACTTTACAACTGCCCGTTTTGCATCAGTCCAGATTAAGGGCGACGAGGAGTAAACCTCAGGGTTCTGCGCCTTATACACCTCTGCCAATATTGAATCCAAATAGAGCCGGTACTGGTTTGTACGTCtatatgaaaaacaaaactagTGatattCAAGAAGAACATGCATGGAGCAACGAATCATCCATACCAGAATCAGATTCCACGCCGCATATAAACATCGGATCCCAATTTCAGTGCCATATTCCCCCTTTTATACCAGCCTACAATAGAGTAACGCAAGAAAGAACACACGAGGACCTACTCTGGGATCCCGGCATCATGCAATGCTCCGATAGCGAagTGGATATGTACTTGGATTTTGCGTGCTGTGCAGCCGTCCCAGGTGGTGGTAGGAATCAGGAATACGCAATGCATCTTCTTCATATGTGTGGGGGAAATATACACGATGCAATGCTGAAACTGATGCAGCCGACTCCATCCCTCCCAACGGAGCATCCGTTATTATGTTACCAATACTCCGAAAGTGATAGATGGACGTCTTCGGAAACTGAAATATTCCATCAGGCGCTGCACAAACATGATAAAGACTTTTTCCTGATTGCTCAAGAGattggcacgaaaaatgttaaacaatgtGTCCAGTTTTATTATATGTGGAAAAAAGTGTGCACCGACGAATATAAACGCTTGAAACTGTCGCGAGATAGGCGGAGTACTAACAAGTTTTGTGATTACGATGAAGACAAATCATTTCCAGATGTGAAACACTTAGGGATGACAGACGCAGGATCACCAATGGCAATCCATGAACATCGAGGCTTTGTGTGCGAATATCCAGATTGTTCAGCTagTTTTAATTCCAGGGCGGCGTTGAACGGTCACATCAGGATCCACGGCGGTACAGCGCGTAATTCGCCAACGCCGTCGCAACTTCATCTCGATCGAAGGCTAACGCCGCCAACTATAGCCACTAcaaccaccaccaccaccaatTGTCATTCAGAAACAACCACCGAAGACTACCCTTGTAAGATATGCGGGAAGGTATTCACAAAGATCAAAAGTAGGAGCGCCCACATGAAGTCCCATCGCCCGCCTGATGCAGAACCAATAAAACGAAGAGATCTCTCCTCGACATTATTCGACTCCGTGCCAAGTCCATTCAACGCCATGTAG
Protein Sequence
MPKKAYRRCEKGVHELAGVRLPLQPYPGGHAVFMYSTAADGNVTLQLKEQDDLDRGSLAAMLARLQDDATFSISYDTDILSDGSIDVLLGTGSSNSLQATGGTDAVTATFDLFDSSSGPDLTLSPQTFTNSAEAFINDNSNSLGVPTESDPVSSTDDKKVQGSGSDVVKLSVKRTRPKAASPNRQGPQQCQVCAKVFGNASALAKHKLTHSDERKYVCSMCGKAFKRQDHLNGHMLTHRNKKPYECKAEGCGKSYCDARSLRRHTENHHSGSSSSSSSSSSSSSSSSTVNAATTTMSPAQGAASGDAASPHGSSCIQYAPPPTTTTTTTGKSQLQQLLATEPAKSGNGGNNDGLTKQQLDLIHQIMEQTQRQSQVPVQKSTPKPAAKPASKTPAKVQRTQQNASSKSNGSTNSPSNKVSSSGTPSTPADKSKTTEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDADNKKCEKKDTTGPPLQTASVSVRALIEEKIINKRITNPVVTTTTTTETTSNNNSAAPPLFPLTVHSTGSADLDTKITSFVVPAPPQHTTEKSRRHSDAEAFTMPRPPSTQQEADALADLILKREKVSVKRTTSDPGQPSQIIQFQSGEGFTLAYQSDDGGYLSPSLQDEVFTRVQDSMLLQNVDHQQLTSIQFQTDNLLQDQTDIALDDYANSVVQSPSYQSSHSVNQELQAVLDSPLPESLAEFSTFHSSANLDLPSPGYHQTQSPQFTGSPHASIATQSPLQSPLIRHDSPGFAYPTPPASHEGRSPCFGQNSMLPMVSPKQNDFGAVITRDLDEPPQASSPLSAAFFTSTMSSSAAVEEALEEVLPGESIAADELYPSLTNSPPPQSPLSVGLTPVASPLSNIPATSSVTSPHNTVTFPMSPHYTLQSQMLPNSDDPLLSSSPKDFAARKKFEFNGLPLKVISSNGLLDLNNTNLTGILVESNGELKFIQTAFQGKNILMSGSPMLTNCINIKQEPDVSRPQMVLKSLQMPAKQMGGQRSKINIDNIKQEDLSDVFLSPTTVPASPVRASRKRPRTETLQLPVLHQSRLRATRSKPQGSAPYTPLPILNPNRAGTGLYVYMKNKTSDIQEEHAWSNESSIPESDSTPHINIGSQFQCHIPPFIPAYNRVTQERTHEDLLWDPGIMQCSDSEVDMYLDFACCAAVPGGGRNQEYAMHLLHMCGGNIHDAMLKLMQPTPSLPTEHPLLCYQYSESDRWTSSETEIFHQALHKHDKDFFLIAQEIGTKNVKQCVQFYYMWKKVCTDEYKRLKLSRDRRSTNKFCDYDEDKSFPDVKHLGMTDAGSPMAIHEHRGFVCEYPDCSASFNSRAALNGHIRIHGGTARNSPTPSQLHLDRRLTPPTIATTTTTTTNCHSETTTEDYPCKICGKVFTKIKSRSAHMKSHRPPDAEPIKRRDLSSTLFDSVPSPFNAM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01400713;
90% Identity
iTF_01400713;
80% Identity
iTF_01400713;