Truf013571.1
Basic Information
- Insect
- Tachinus rufipes
- Gene Symbol
- -
- Assembly
- GCA_963932245.1
- Location
- OZ010742.1:46846736-46866555[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-07 0.0028 19.7 0.0 4 37 83 115 82 120 0.93 2 2 2.8e-11 1.7e-07 33.2 0.0 1 35 136 171 136 179 0.90
Sequence Information
- Coding Sequence
- ATGTTGAGGAATGCGTTGGCCACTGGTCTAGGTGAAAGGAATGGGAGAGAAGAAAAGCTTatagaatttttgcaaatcaaaGACATGGCTAAGCTATTGGAATCATCACATGCTTGGCTGGGTGCATCGACATCTTCGATCGCCGACGAAGGGTCTACGGAAGAAGAACCATATTTAAAGTTTATCCAAAGTCAAGATATTAAAGTGGTGTGTTCTTTGAGGAAGTCTCCGAAATGGACTTCCGTTGAACTAAATCGGGCAATAGAGTTAGTCCGGTCGGGCATGCCTATAAAACCTGCAGCTCAACTGTGTAACATACCAGTCATGACCCTCTGGAGACGATCAAAAGCAGTTGGGGTAGTCAGTAATTATCCcatcttattaaaattaaaatcaccaACATGGACCCAAGACCAACTGAAAGAAGCAATTGATGCagtagtaaaacaaaaaatgcgctTTACGCAAGCTTCTCATAAGTACGGAATACCGAAAGGCACTTTGTACGATAATATATTAGGAAAAACTAAACGCATGGCTGTTTTAGAGGAAGCAGGTTTGACAAACATGGAGGAGGCGGCTGTTTTAGAATATTGCTGTGATGTATCTATTTCGCCATATAATAGGCGAACTAAAAAGTCTCTTACATCCGTTTTAAACTACGTAGAATCGTTGAGACGGGTCCGCGATCCTGAATTTATGTTTACCGGACTTTCCGGATTCCGGTGGTGGTGGGCGTTCTGTAAGAAACACAGTATTGTTTCCCTTTATTATGAAAACAACACAAATGATAGTCCAGTTAAAGCATCCAcgagtaatttaaaaacagatcCGGAATCACCCTCAAATCATAACGATTATGCAAAGTCGGTTAAGTCAAAAGATTATTCATACGACAACAGCAATAATAAATTCTGA
- Protein Sequence
- MLRNALATGLGERNGREEKLIEFLQIKDMAKLLESSHAWLGASTSSIADEGSTEEEPYLKFIQSQDIKVVCSLRKSPKWTSVELNRAIELVRSGMPIKPAAQLCNIPVMTLWRRSKAVGVVSNYPILLKLKSPTWTQDQLKEAIDAVVKQKMRFTQASHKYGIPKGTLYDNILGKTKRMAVLEEAGLTNMEEAAVLEYCCDVSISPYNRRTKKSLTSVLNYVESLRRVRDPEFMFTGLSGFRWWWAFCKKHSIVSLYYENNTNDSPVKASTSNLKTDPESPSNHNDYAKSVKSKDYSYDNSNNKF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -