Truf012616.1
Basic Information
- Insect
- Tachinus rufipes
- Gene Symbol
- -
- Assembly
- GCA_963932245.1
- Location
- OZ010742.1:31779656-31805064[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.1e-12 3.1e-08 35.5 0.0 1 39 320 359 320 363 0.90 2 4 4.8e-13 2.9e-09 38.8 0.1 1 39 374 412 374 415 0.95 3 4 4.5e-19 2.7e-15 58.1 0.0 1 45 429 474 429 474 0.98 4 4 0.035 2.1e+02 4.1 0.1 1 13 481 493 481 499 0.88
Sequence Information
- Coding Sequence
- ATGTTGCAAATAGGGAGCATAAAGGAGAGTATAAACAGATTTATAGATGTAGGTCAAGATTTGCGAATGGCGTCAAAAGGAAAATGGACAAACTTTTCAACAAAACCTGACGAGGGAATGAAAGGGAAAAGTTATGGAAGATCACAATGCCATTTTGATGCTTCCTTTGCTGgTCTCTGCGAGTCTCCGGATGAAAAAGAGAACGACGATTCCCCATTTCCTTTCATAGCCAGAGAATTCCCGAAACTCCGCAGGCTCGGCTCACCGAAACACTTGAGCAGTTTAGATAACAACAatagaaaacacaaatatagaAAGCCGGAGAAGTTAATAGTCAATAAAGAGCCGGAGAAGGAGGCAGATGTTAATTCTTCGGACGAAGACAATGAAACGCCAGTAGTTGCAACGAATGAAGAGAGGAGGAGGAAACAAGTAACGCCTGTACAAAATAAACCTCTTAATATGAGCAGTAATGCGCTGTTAGCCGGACAGatGCTCTTCTCACAGTTTGGTGTGGACAATGAGGATTTTCCACCAGAACCACCGGCGCCGACGGCAACACCCGTCGGCCACGTTGATATGCAAGACCATTCACCAACTCGGACCTTACTCACGAATTCTTCAATACACAGGACAGACCTTTCAGactcacatataaaatttagcgacattaaaaaagaaatcgATATAAAATTCGAAACGTTACGATCATTCGACCAGGATTCCTTATTGGATATAGACAGTTCACACATGTCTGGACCGGATCATTCTATGGACAGCCACGACGATCAAGACCAATCTATGCAACATACGACAATGATGATTACGCCAGAATTAATGGGTATGATGCCTGGAGCTTCACATCGAATGGaGCAAAATATGGATACCTCTGTTAAAGCTAATGGGCATGGTGATCATCAACCAATAACACGGCATGGTGGAGGTCCAAAAACCTGGACACAAGAAGACATGGAACTAGCATTAGACGCATTAAGAAATCATAATATGAGTTTAACTAAGgcttCAGCAACTTACGGCATTCCATCAACAACGCTATGGCAACGCGCTCATAGATTAGGTATAGATACTCCAAAGAAAGAAGGACCTACGAAATCATGGAcagaagaaaatttaaattcagcATTAGAGGCTCTTAGGACAGGAACGATATCAGCGAACAAAGCCAGTAAAGCGTATGGTATACCAAGTAgcactttatataaaattgcacgAAGAGAAGGGATACGGTTAGCGGCGCCATTTAATGCTGCACCGACGACATGGACGCCTGAAGATTTAGAGAAGGCTTTAGAATCGATAAGGTCTGGACAAACGTCGGTGCAACGGGCTTCGACTGAATATGGCATTCCAACTGGTACTTTGTACGGACGGTGTAAGAGGGAAGGTATTGAATTGTCAAGATCGAATCCAACACCTTGGTCGGAAGATGCCATGGGAGAAGCGTTAGAAGCTGTTAGGATACAAAATACAGAAGTAACGGACAAAGCAGAGATTGTCAATGCTATAGAAACGTTCTATAATGAACTTTATGATACGCACACAAATAGGACATACGAACAACCAAAACATATCATCAATGTCGAATCAGAAGAAATGCCAGAAATTAGTAGATACGAACTGGAAACTGCACTAAAGAAcatgaaaaatatgaaaacaccTGGAGAAGACCGAATTACTAGCGAAATGTTGAAAATAGGTGCAGGTATCTTAATAGGTGCAGTTCTAATACTAATGAATAAATGTCTTGAAGAAGGCAGAGTACCAGACAACTGGCGGAACTCAAAGGGTACAGTACAACCGATCATCTACAAGCGTTACGCTCTCTCATCGAAAAAAAATACCGAATACAATGTTCCTATACACCTGCCTTTTGTAGATTACCACAAAGCCTTCAACTCTGTAGAGACCTGGGCAATCCTAGAAAGTCTTGAAAGAGCACGAATTAATTCTAGATATACGAACTTGCTGAAGTATATATACACAAACTTaacaatgcaatttaaaatCGACGAAGATTTGAAATCAAGCTTTGTAGAGGTCAGAAGAGGCGTGGGCCAAGGGGACAcaatatcttttaaaatgtttaccctCGTACTTGAGGATATGTTCAAAACATTACCTTGGGACAAAATGGGCTTGAACATAGACGGTTCCTATTTAAACCATCTAAGATTTGCAGACGACGTAGTACTAGTCAGCAAGGATATCCACCAGCTGGAAACTATGTTAAGACAACTACAAGAAGCGTCAAAATTAATTGGACTAAAAATGAACATGAACAAGACTAAAAGCATGAGTCcggaagaaatagaaatcaCTATTGACAACCACCTTCTTGAAACAGTAAATGACTATGTATATCtaggttataaaattaaactgggGAAAGACAATCAAACGGCAGAAATCATGCACCGTGTAGGCCTAGGATGGGCAGCCTTTGGGAacttgaaacatatttttaagaacACAAATATCCCAACAAATTTAAAGGAATAA
- Protein Sequence
- MLQIGSIKESINRFIDVGQDLRMASKGKWTNFSTKPDEGMKGKSYGRSQCHFDASFAGLCESPDEKENDDSPFPFIAREFPKLRRLGSPKHLSSLDNNNRKHKYRKPEKLIVNKEPEKEADVNSSDEDNETPVVATNEERRRKQVTPVQNKPLNMSSNALLAGQMLFSQFGVDNEDFPPEPPAPTATPVGHVDMQDHSPTRTLLTNSSIHRTDLSDSHIKFSDIKKEIDIKFETLRSFDQDSLLDIDSSHMSGPDHSMDSHDDQDQSMQHTTMMITPELMGMMPGASHRMEQNMDTSVKANGHGDHQPITRHGGGPKTWTQEDMELALDALRNHNMSLTKASATYGIPSTTLWQRAHRLGIDTPKKEGPTKSWTEENLNSALEALRTGTISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTPEDLEKALESIRSGQTSVQRASTEYGIPTGTLYGRCKREGIELSRSNPTPWSEDAMGEALEAVRIQNTEVTDKAEIVNAIETFYNELYDTHTNRTYEQPKHIINVESEEMPEISRYELETALKNMKNMKTPGEDRITSEMLKIGAGILIGAVLILMNKCLEEGRVPDNWRNSKGTVQPIIYKRYALSSKKNTEYNVPIHLPFVDYHKAFNSVETWAILESLERARINSRYTNLLKYIYTNLTMQFKIDEDLKSSFVEVRRGVGQGDTISFKMFTLVLEDMFKTLPWDKMGLNIDGSYLNHLRFADDVVLVSKDIHQLETMLRQLQEASKLIGLKMNMNKTKSMSPEEIEITIDNHLLETVNDYVYLGYKIKLGKDNQTAEIMHRVGLGWAAFGNLKHIFKNTNIPTNLKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -