Basic Information

Insect: Tachina lurida
Gene Symbol: -
Assembly: GCA_944452685.1
Location: CALYBZ010000824.1:33296-38145[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 1.4 1.4e+02 4.2 3.7 2 20 467 485 467 487 0.94

2 9 0.5 49 5.6 3.7 1 23 496 519 496 519 0.85

3 9 0.23 22 6.6 3.1 1 23 524 547 524 547 0.94

4 9 4.8e-06 0.00047 21.4 3.2 1 23 557 579 557 579 0.99

5 9 6.6e-05 0.0064 17.8 1.2 1 23 584 606 584 606 0.98

6 9 0.0017 0.17 13.3 1.2 1 23 612 634 612 634 0.98

7 9 0.0025 0.25 12.8 0.6 2 23 640 661 639 661 0.96

8 9 0.0093 0.91 11.0 0.6 1 23 700 723 700 723 0.88

9 9 3.3e-05 0.0032 18.7 3.4 2 23 730 752 729 752 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	1.4	1.4e+02	4.2	3.7	2	20	467	485	467	487	0.94
2	9	0.5	49	5.6	3.7	1	23	496	519	496	519	0.85
3	9	0.23	22	6.6	3.1	1	23	524	547	524	547	0.94
4	9	4.8e-06	0.00047	21.4	3.2	1	23	557	579	557	579	0.99
5	9	6.6e-05	0.0064	17.8	1.2	1	23	584	606	584	606	0.98
6	9	0.0017	0.17	13.3	1.2	1	23	612	634	612	634	0.98
7	9	0.0025	0.25	12.8	0.6	2	23	640	661	639	661	0.96
8	9	0.0093	0.91	11.0	0.6	1	23	700	723	700	723	0.88
9	9	3.3e-05	0.0032	18.7	3.4	2	23	730	752	729	752	0.96

Sequence Information

Coding Sequence: ATGCGGTGCTGTACACTGTGTAAAAAAACAGTTCTTACTGGAAGTGGTATCCTGTTTGGTGTTCCAAAAGACTTGGACAGAAGACAAAGATGGGCTGAAATTTGTGGCAAACACTTAAAACAAAGTCATTTAATTTGTGAGGCTCACTTTCCACCTTGTAGCATTATACGCACAGGCCTGAGACTTTTGCCAAATGCTGCGCCCTCTCCTGAGCTCCTGGGAAAACATCATGTCAGTGAAAACTCAACCTTAGAAAAAAAGCTTAATGTTGCCGCACCCGAAGATGAAGTAATTTTTGAAAGCGAAAACATTAGCCCAAATTCATCAAGTACAAATAACTTTATGCCTCCACAACTAGAAGAAGAACCGTTAATTGAAATTATGCCTCCACAACTAGAAGAAGAACCGTTAATTGAAATTATTCCCCCACAACTTCAAGAAGAAAAGTTAATTAAAATGCCAAAGGAAGAACTTATGCAAGTACCTATTATAAAATCAATTTCCTGTGCGGGGACCACTCAGACCAACACACGCCTTTGTGGTTTAGTAGAAGCCTCAGACTTTGCAGATGAATTCCGCCTAAATTGTTTTTATTGTTCAGACGTATTTCCATTGGAAAAATGGAAAAGCTTCGTACAGCATTTAAACAACAAGCACGTTAAAGAGGAAGCAGCATTTAAAGTTTGCGAATATGTGTCCGAAGAACACGATTATACGCCCATAAGCTTAGTGACTAGTCCTGCAGAGTCTGCCTTAGAAACGGTTGCTGTCATCAAGACTGAATTACGGCGATCCTCTTTAGTAGATCCCCTGGAAACTAAAGATAACATATTTGAAACTGTTTTACTAAATTCTAACTTTTCTTATACACCACATGAGAACAAGGCGCTTTCCAACCATGTTAATATCTTAAACAATATTGACAAAACGAAAACTAACTTAAAGAATGAATCCTTGCAGCCAACAGTTTTAAGTCGCTGTCTTAAAAGAACAAATGTAGAAGAAATGGAGATAGAAGAGAAGAAAGAATATATACCAACTAGCATTGAAATGCTGCAACTTAAACATACCACAGAGATTACTTTTGAATATACACCACGGGAAGTAGTAGATTTGTTGCTGGAAAATATGAAAAAGTATCCAGTCTTATGGAGGTTTGATGACAAGCCATTCAATGAAGACATCTACGAAGCTGCCGAGGCTTTGTGTAAACTAGTTAATGACAAATTTTCATTGAACATTGATAATTTGAAAATGCGACGCAGCATAAATCGTATACTCAGATTTTACTGTTATTTCTTCCCAAATGAAGACAATGAAATGAATGAGGAATTTACTTCTTATTATAACAAGTGTTCCCTTTTCCTGCCTACTTCTCGCAATGAAATTGCATACGCGCGTTGTTCACACTGTTATATATGTTACAGACATGATTTTGATTTGCAACTTCACCTTTTCGAAGAACAAAAATATTTAAAATGGCCTTTCAAGTGTCTTCAATGTAAAGAAGTTTTCAGACAACATGATGAATACGAGTTTCACAAGCATATACCACACTATGATGAAATATTTAAATGTGAACCATGCAATCAAACATTTTTCCGTCGTGCTGTATATCGCAAACATATTTTGGACTGTCACCCTAATGTCCGTGATGAACCAGGCAGATACAAGTGTGATATATGTGGCAAAACCTATCATTCAACTAGTAATTTAAGTGCTCATAAAAAGACCCACGGAGAAAGGAAATATAAGTGTCGAGTGTGCCCAAAATCGTTTTACACGAATGGAAAACTAATGCTTCACTCGAAGATTCATCGAAACGAATTTGATTATGTGTGTGAAGTATGCGGATTGGGTTGTTTTTCCAGAGCAAAGCTCACTATGCACTTAAAGAAACATACTGGTGAAAAGGTCACTTGTAATATATGTAATCTAAAATTAAGAAAGTCGAGCTTAAGCCGGCACCTTCGAATAGTTCATGTACCATATATAGGTGTTGTCAATCCGAAACCAACACGGAGGCATCGTTATGATAGATTATTTAAATCAAGTCTACTACGGTCTGGTCCAAGAAAGCGCGGAGAAAAATTAAATTACCAGTGCAAAATATGTAACATTAGCTTTGAAAATCGTAAATTGAGAGCAGATCATAACAAAGAGTTACATTCAGATATTTCGAAATGGACGTGCAAAATGTGCAACACCCAGTTTAGTCAGAGAAGAGACCTGCAGCGTCACTATCGTAGAAAGCATAAGTTACACGTGATTCAAGCTTATAAATTGGTAGATGAAAATGAGGACTTAAACGTTGTGTTAGCTCTTGAAAATGAAGATTTGGATAGATTAGTAAAAATTCCCACCGTTTCTAGGAAGAAATCAGACAATGAAACAAAATCAAATGATAAAACTCCAACAAAATCACATTTGTTGCCAGATGAGGTTTTGTTTGAAGTAGAAAAAATTCACAGTTCTATAATACAAGATGAAATAATGCAAGATGCTGACAATATTGAAACACAAGAAATGAAAGTTAATAACTTTAATGACTTTTTTACAGATCTATTAAACGAATAA
Protein Sequence: MRCCTLCKKTVLTGSGILFGVPKDLDRRQRWAEICGKHLKQSHLICEAHFPPCSIIRTGLRLLPNAAPSPELLGKHHVSENSTLEKKLNVAAPEDEVIFESENISPNSSSTNNFMPPQLEEEPLIEIMPPQLEEEPLIEIIPPQLQEEKLIKMPKEELMQVPIIKSISCAGTTQTNTRLCGLVEASDFADEFRLNCFYCSDVFPLEKWKSFVQHLNNKHVKEEAAFKVCEYVSEEHDYTPISLVTSPAESALETVAVIKTELRRSSLVDPLETKDNIFETVLLNSNFSYTPHENKALSNHVNILNNIDKTKTNLKNESLQPTVLSRCLKRTNVEEMEIEEKKEYIPTSIEMLQLKHTTEITFEYTPREVVDLLLENMKKYPVLWRFDDKPFNEDIYEAAEALCKLVNDKFSLNIDNLKMRRSINRILRFYCYFFPNEDNEMNEEFTSYYNKCSLFLPTSRNEIAYARCSHCYICYRHDFDLQLHLFEEQKYLKWPFKCLQCKEVFRQHDEYEFHKHIPHYDEIFKCEPCNQTFFRRAVYRKHILDCHPNVRDEPGRYKCDICGKTYHSTSNLSAHKKTHGERKYKCRVCPKSFYTNGKLMLHSKIHRNEFDYVCEVCGLGCFSRAKLTMHLKKHTGEKVTCNICNLKLRKSSLSRHLRIVHVPYIGVVNPKPTRRHRYDRLFKSSLLRSGPRKRGEKLNYQCKICNISFENRKLRADHNKELHSDISKWTCKMCNTQFSQRRDLQRHYRRKHKLHVIQAYKLVDENEDLNVVLALENEDLDRLVKIPTVSRKKSDNETKSNDKTPTKSHLLPDEVLFEVEKIHSSIIQDEIMQDADNIETQEMKVNNFNDFFTDLLNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01398547;
90% Identity: iTF_01399531;
80% Identity: iTF_01399531;