Tlur016622.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tachina lurida
Gene Symbol
-
Assembly
GCA_944452685.1
Location
CALYBZ010000864.1:389273-426798[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.011 1.1 10.8 1.3 2 23 274 295 274 295 0.95
2 15 0.59 58 5.4 0.7 1 23 372 395 372 395 0.96
3 15 0.037 3.6 9.1 3.0 1 23 402 424 402 424 0.99
4 15 0.029 2.8 9.5 0.3 2 20 480 498 479 501 0.94
5 15 0.023 2.2 9.8 2.0 1 23 574 597 574 597 0.94
6 15 0.0073 0.71 11.4 0.4 1 22 604 625 604 625 0.96
7 15 0.00057 0.055 14.8 2.6 3 23 694 714 692 714 0.94
8 15 0.0011 0.11 13.9 0.1 2 20 741 759 740 761 0.94
9 15 3.1e-05 0.003 18.8 2.8 1 23 812 835 812 835 0.98
10 15 0.029 2.9 9.5 2.3 1 23 872 895 872 895 0.96
11 15 0.0032 0.31 12.5 1.4 1 23 969 991 969 991 0.98
12 15 0.00021 0.02 16.2 4.5 1 23 997 1019 997 1019 0.98
13 15 0.00024 0.023 16.0 0.7 1 23 1027 1049 1027 1049 0.99
14 15 1e-06 0.0001 23.5 1.8 1 23 1055 1077 1055 1077 0.98
15 15 2.3 2.3e+02 3.5 0.4 1 12 1083 1094 1083 1096 0.89

Sequence Information

Coding Sequence
ATGTCTTTTCTGAGAACCCCACCGAACGAAGCATCTGCTTCTACAGCCTCTACAGCGGGTGAGAATTGTTGTACGGTTTGTAGCACTGCAATATCGGAAACGGATAGTTGTCTGATTATTCAAAATTGTAACCACTCTTTCCATCGGTCTTGTATCGAGAACTATTTAACTAATACAGCCGAATGCCCAAGTTGCAAAAGACCTTGTGAACTAGCTGATTTAAAACGATTTTGTTTTCCTAGTCAGAATGATAAACAATCTAAACCAAATACTAGAGGGCGAGGCCGCCCTAATTCAAAGGTTGCGTACAATACACGCAGCCACAGTAGAACATTGACCCATGATACTCAACGTCGTTTAGCAGAAACAGACAATGAACAGCCAGAAGACGATGGTTCAGACATTGCACAAGCTTCTCTTTCTGTGCGGGAGAATGTAAGTAATCAAACTTCTGCTAACCAAAATAGTTCCCCATCGGCACAAATTAGCCGCAGTGACCCCACTAATATGGATTATAGTCAAGTCAATCAAATGATTGAAACCACTATGGCCAGACTTTTATCCAATTTTAATTTTGTTCCCATGCCCCAGCCTCAACCTACTTCCACTGGTAATGAGCCTATTAGCAATATTCCCAATCGAAATAACACCAATACTTCACCCAATCTACGCCCTCAGGCCAATATCTCGTCTAATGAACCGAATCTTAATTATCATCCACCATTTTCTAACCACGAGTCACTTGAATCCAATCAAAAGCAATTAGGTCGTTTATTTGGAGAACGTCTGTATAGCAAACCTCTTATATTACCACGAGCGGAATGTAAGCTGTGTAGTTATACTTTTATGACTAAAAAACAACTTCTTCTGCACTTGGATAACCATAGTGAGGCCAGAACTCTTGATAACTTAAAATTAACCAGCGATATTATTCAGCGTTGGTTTTCAAATATAAGCGATTTACAAGACATAAAAACAACAATATGCAAAGAAATTCGAGAGAAAAATTTTTTCAAATATTATACAATTTTAAATGAATTTTGCTATGAAATATCCATTAGTGATACGGATGCAGAAGATTTGGAAGAAGAAACAGAAACACCTGCCAACAAATATAAATGCGAATTGTGTGCAAAACTGTTTTTGTACAAATATCAAGTGTTTGCACATTTGAGAGAGGATCATATGAGCGAAAAAATTCCATTCAAATGTAGCCGTTGCAAGTTGGAATTTATATCTACAAAAATGTATGAACAACACAGACAAACTCACTGTCGAAATGAACATAAACTACTGAGCTGTTCTAATTGTCCTGGCAAGTTCGTCTGGCACAAAAATATGAAGAAACACAGTTGTGCTACGAAAATATTAAGTTTTGAAAGATCTGAAAGGTACAATGAAGTAATGCCTTTACTTCCAAAAACTACGAGTGTCATAAGATGTGGTCTTTGTGAAATTAAATTTAAAAAACTGCGCGATTTACGACAACACATGCCTTTGCACGCCGATGGCAAAACTGGAATTGACTTTAATGGTTGTATTTATGTAAATCAATTTGAAAATGTATCCAGCAATCGCGAATTTTTGGAACAGAAGATTAAAAATGCTTTTACGAAACGCCAAATAAGTCAGCTGTATCAAGCCATCGATAAGTATGGTAAAGAAATTGACATTTCAGATTCGGATAGCGATGAAGATAATGCTGATGGTGAAAAAAGCTATTTGTGCGAACTTTGCTATGCAACGTTTAAAAAGCGAAAACTGCTGTTTAATCATCAAAAAGAACAACACAAGAATGTTTCAATGCCTTTCACTTGCAAGGAATGTAAGATGCAGTATGTCAGTACTGATTTGTTAGAACAACATATAAAGAGGGAATGTTGGAATGAACATCGACGAGTTGCTGAACAATGCGATTGTTGTAAAGAGCGTTTTATATGGCCGGAAAACATGTTGAGACATAGAGAAATACAGCGATACATAAATATTAACAATTCGGTGTCGGAGAACTTGCGTCGTAGCCAGGTAGAAAAATTAATTGCTTCATCAAACTCAAGTGATAATATCGAAATTCGTTGTTGTTTCCTCTGTCCTAAAACTTTTTCTAATACTGATAATTTAAATGATCATTTGGATAGTCATCGGTTCACACCATCCACTATCAAAACTGTTGCAAGCACAATACATTCTACATGGTGGCCAAATGGCAGAAAGGCAATAAAATGCAAAATATGTGGCCAAGAATTTTCAACTATGGCCGAATTAAAGGAACACTACTCTTTAAAAAATCTCAAAAACGTGTGTGGTGCCATGCAACATTCTTTGGATAATTACTCGATTACTAATCAAATGGGGTTTGAATTACATTTACAGCTGGATTCAGAAACAGAAACTGAATGCTTCGAAAATGATGAAAATAAAGAGATGTTGGTATATAGTTGTGGCATGTGTAATAAATCGTTTAAGCGAAAATATCAAATATCTCAACATCAAAGATCCATGCACAATTATGAACTGTTGGAACTCAAATGTGAACGCTGTTTTTTTAGAACTGTATCACAGaaagttttagattatcataaagtaagccagtgctttaatgttgaaaaaatgcaccaatgcaatcagtgtaatttcaaatttatgtggcaagagaaccttgagaagcatatttccatatttcatacttcaaaagatttcgtcaaagcattgaatccgtttaacgcaacgattttaaatgaaggaagcaatattaatgatcaatgccttgaactgcatcaaaacgatacagatgcaagggattgcatgcaatctaaagatgtatgtaaatgtcctatttgtggaaattttattaccaaaaagaattgttcagaacatttaaggaaacacaaatatgacaaatcttacaattgcgatttttgcgaaatgtcctttttaacaaatggctccttaaatagacataagcgcatgcatgcggaacatcatcctttcaaatgcacgctttgcgagagacacttcaggcggcaaGAAGATCTTCGTCTTCATAAACGTTTACACAACGGCCGAACCCATACGGGAttcaagtgcgatctttgcgataaaagctttaaggcggaatataatgcaataatacatcgacgttcacactttaatgaacgtccttttaaatgtacactttgcgagaaatccttttccaatccaagcagattaagagatcacatgcgcaaccatactggcgaacgtccatatcagtgcactatttgtCGTCAAAAATTTATGACTTCACCTAGAGCATTCACAATATGTCGTAAGGGAGGAAATTTTCTATTTTTCCCCAGAACTATCAACACCAGACGCTCAACATTAACACACGGTAATCAGAATATGCTGCTGGTATCAGTGCATCTACCCTCAGATACCCCGACATTACCACAAACATCGGACTTAAGGTGCATCATTTCATCCGTCAGGAATAAAGGTATTAATGATTTAATAGGCTGTGACGCCAAATCACACCATCTCTCTTGGGGCAGGCCCGCTGAAGAAGAGAACGCACAAAAAAAATTTAAATATGAGAATTTAGATTCCGCATTAAAAATCATCAAGAGTATGACAAATAAATGTTTTATTAATGGAGTTCAGTATAAATGTCGTACTTGCTTCGATCCTGCAACAACAGTATATACACTTGCAGAGGAGTGCACCAACTCCAGAACTTGTCAAGATTTATTGAATGATATTGCTAAGTTAAAGACAAACGAGGACGAGTTACTTCCGAATACCATTTGTTCTAAATGTTTGGGCAAACTTATAAATTGTTACGATTTTATACTTCATATTCAAAATGTGAATGAAAAATACCACAAACTTTTGTCAAGTGGTAAACATTCATCACAAAATGATGGTCTTCCCAGTAGCTCAAAGAATATTGCAGGATATTTGGCAGAATATGCTACTGCCCTGCCCTTGGATCGGTGTGTTTCGGAAATTAAGATGGAAGACGAGGAACTTATGCCTTATGATATTGTTTTAAATAGCGATGAAAGAAGAAACGATTCGGCTAAAGGAGTTTACAATATACGAGACGAGCTGGATGAGCTATTACAGAGCCTTAATTTGATTGAAGTTAAGCCTTATTTAAAGAAATCTCAAATAACACTCGAAAGTTTAAAATATTTATCGAGAGAAGATATTAAAGAAGCTATACCACCAATTGGACTACGTGCTTGCTTTAGAGAAAAGTTATTTATTTGGAGAAAGAGCCAGTACGGAATTGATGATGACAACTTACCTGCAACAGTTGCCAACAAAGTAGTCTCATGGCTACAAAATAGTAGGAATCTTGGATTAACATCAGCAGCGACATCATCAATTTTTTCAACATCTAATGGAAACTCTAAGCTATCAAAGGGTCTTGAACTAATTTTGAAAGACAGCCTTAAAGGGAAAGCTATAACTAAGTATTATGAAAAAAGCAATCGCTTGACAGATTTACTTCGTACAGATTTAATTAACATAATTTTAGAAGATATTTTATATCACGAAGTAAAACTATCACCAAAAGATTTTCCACCTATTGTAGACGAAATTATAGGCAACTTCCCTTGTGAAATAAAAGAATATTATTTTATACCGCGAGGTAGAAAGGCAAATCCGGGTGGTAAGCTTTGGGATAGATACGTCAATCAAAAATCAAAACGAGGACGCTTGTTGCGTAAGTTTGAAGATGGTTTGGACGTGTCGAATGAAAGTCCGGCGCATTCCGAAGTGGACGAATTACTATTAGAGGCATTAAAAACTTCACTTTCAAAAGATTTTTCAAATTGGGATGTCGTTAAAGACAAATGGCAACGCACATTTCCTCTGAGGCAAAGAGAATTGAAATCTTCTAAAAGCAATTTTGAATTTTTAAATGACTGGCCACTTTACTCTAATCCAAGATCTCTCGAACTAATTAATATTGATTTTGAACTACTTTATCCAAATAAAGCACATCTACTTTTTAGCAAATGGAGAGAGTTTACACAGAAAATTGATAATTATTACCATCTTAATATTAAAGACAAAAAATCGAAAGAACTTTTAGCACTTGTAAAAGAAACCTCTAACCAAAATTCAGTCGACTACATATATACGATTCTATTAAATTCAGTTATTATACCAACGGCTCGATTTTCAGACGATATTGGAAAGAACTTGAAAAAGATTTCTATAACGGATGCTAACGAAAGCTTTGTTCTGCATCTGACAACGATAAGTGATTGTGAGAAGGTAATAACTGAACTAAAGGACAAATTTTTTAGTAAAGACCTCACTGTGCAACCTCTAATAATAGTAGTAGGTGATAGTATAAATAATCTAGAGCAGTTTTATGTCTACTTCGATAAGACACTTTTACAATTTGACTCCTTTTTACAAAGTTTAGATATTTGTTTTAAAATAACAAATGCATTAAATTTGGAATATCCAAAAGGCTGTCAAGGACCATGGCTTTTTATCCAGGAATATTTTTATGAAATTAAAGATGTCAATGAAAGAAAGTTGTGTAGTATTTATTCTTTATTTAACTTTTTAAAACCATAA
Protein Sequence
MSFLRTPPNEASASTASTAGENCCTVCSTAISETDSCLIIQNCNHSFHRSCIENYLTNTAECPSCKRPCELADLKRFCFPSQNDKQSKPNTRGRGRPNSKVAYNTRSHSRTLTHDTQRRLAETDNEQPEDDGSDIAQASLSVRENVSNQTSANQNSSPSAQISRSDPTNMDYSQVNQMIETTMARLLSNFNFVPMPQPQPTSTGNEPISNIPNRNNTNTSPNLRPQANISSNEPNLNYHPPFSNHESLESNQKQLGRLFGERLYSKPLILPRAECKLCSYTFMTKKQLLLHLDNHSEARTLDNLKLTSDIIQRWFSNISDLQDIKTTICKEIREKNFFKYYTILNEFCYEISISDTDAEDLEEETETPANKYKCELCAKLFLYKYQVFAHLREDHMSEKIPFKCSRCKLEFISTKMYEQHRQTHCRNEHKLLSCSNCPGKFVWHKNMKKHSCATKILSFERSERYNEVMPLLPKTTSVIRCGLCEIKFKKLRDLRQHMPLHADGKTGIDFNGCIYVNQFENVSSNREFLEQKIKNAFTKRQISQLYQAIDKYGKEIDISDSDSDEDNADGEKSYLCELCYATFKKRKLLFNHQKEQHKNVSMPFTCKECKMQYVSTDLLEQHIKRECWNEHRRVAEQCDCCKERFIWPENMLRHREIQRYININNSVSENLRRSQVEKLIASSNSSDNIEIRCCFLCPKTFSNTDNLNDHLDSHRFTPSTIKTVASTIHSTWWPNGRKAIKCKICGQEFSTMAELKEHYSLKNLKNVCGAMQHSLDNYSITNQMGFELHLQLDSETETECFENDENKEMLVYSCGMCNKSFKRKYQISQHQRSMHNYELLELKCERCFFRTVSQKVLDYHKVSQCFNVEKMHQCNQCNFKFMWQENLEKHISIFHTSKDFVKALNPFNATILNEGSNINDQCLELHQNDTDARDCMQSKDVCKCPICGNFITKKNCSEHLRKHKYDKSYNCDFCEMSFLTNGSLNRHKRMHAEHHPFKCTLCERHFRRQEDLRLHKRLHNGRTHTGFKCDLCDKSFKAEYNAIIHRRSHFNERPFKCTLCEKSFSNPSRLRDHMRNHTGERPYQCTICRQKFMTSPRAFTICRKGGNFLFFPRTINTRRSTLTHGNQNMLLVSVHLPSDTPTLPQTSDLRCIISSVRNKGINDLIGCDAKSHHLSWGRPAEEENAQKKFKYENLDSALKIIKSMTNKCFINGVQYKCRTCFDPATTVYTLAEECTNSRTCQDLLNDIAKLKTNEDELLPNTICSKCLGKLINCYDFILHIQNVNEKYHKLLSSGKHSSQNDGLPSSSKNIAGYLAEYATALPLDRCVSEIKMEDEELMPYDIVLNSDERRNDSAKGVYNIRDELDELLQSLNLIEVKPYLKKSQITLESLKYLSREDIKEAIPPIGLRACFREKLFIWRKSQYGIDDDNLPATVANKVVSWLQNSRNLGLTSAATSSIFSTSNGNSKLSKGLELILKDSLKGKAITKYYEKSNRLTDLLRTDLINIILEDILYHEVKLSPKDFPPIVDEIIGNFPCEIKEYYFIPRGRKANPGGKLWDRYVNQKSKRGRLLRKFEDGLDVSNESPAHSEVDELLLEALKTSLSKDFSNWDVVKDKWQRTFPLRQRELKSSKSNFEFLNDWPLYSNPRSLELINIDFELLYPNKAHLLFSKWREFTQKIDNYYHLNIKDKKSKELLALVKETSNQNSVDYIYTILLNSVIIPTARFSDDIGKNLKKISITDANESFVLHLTTISDCEKVITELKDKFFSKDLTVQPLIIVVGDSINNLEQFYVYFDKTLLQFDSFLQSLDICFKITNALNLEYPKGCQGPWLFIQEYFYEIKDVNERKLCSIYSLFNFLKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-