Basic Information

Insect: Tachina lurida
Gene Symbol: -
Assembly: GCA_944452685.1
Location: CALYBZ010001789.1:109425-117501[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.025 2.4 9.7 0.0 6 23 396 413 396 413 0.99

2 9 3e-06 0.00029 22.0 3.0 2 23 420 442 419 442 0.95

3 9 4.5e-06 0.00044 21.4 0.1 2 23 448 469 447 469 0.97

4 9 0.00075 0.074 14.5 1.0 2 23 477 499 476 499 0.96

5 9 0.36 35 6.0 0.3 3 23 505 524 503 524 0.90

6 9 2.3e-05 0.0022 19.2 1.7 2 23 533 554 532 555 0.94

7 9 1.1e-05 0.001 20.3 1.8 1 23 564 587 564 587 0.98

8 9 2.4e-05 0.0023 19.2 0.7 2 23 593 614 592 614 0.97

9 9 0.004 0.39 12.2 1.3 1 21 620 640 620 641 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.025	2.4	9.7	0.0	6	23	396	413	396	413	0.99
2	9	3e-06	0.00029	22.0	3.0	2	23	420	442	419	442	0.95
3	9	4.5e-06	0.00044	21.4	0.1	2	23	448	469	447	469	0.97
4	9	0.00075	0.074	14.5	1.0	2	23	477	499	476	499	0.96
5	9	0.36	35	6.0	0.3	3	23	505	524	503	524	0.90
6	9	2.3e-05	0.0022	19.2	1.7	2	23	533	554	532	555	0.94
7	9	1.1e-05	0.001	20.3	1.8	1	23	564	587	564	587	0.98
8	9	2.4e-05	0.0023	19.2	0.7	2	23	593	614	592	614	0.97
9	9	0.004	0.39	12.2	1.3	1	21	620	640	620	641	0.95

Sequence Information

Coding Sequence: ATGAGTTGCCTTTTGTGCTTAGAAGTAACTGAAAGTTATAAGGATTTGATAGTTTTTAACTGCAGCGAATGGCAGGAACTAAACATGCAGTATATTATTGAAAAGTATCTTTGGAAATTGGAAGTTTTAAATATTCGATCCTATATATGCCAAGAGTGTTGGCAAGAATTATACAATTTCCATAAGTTTTACTTAAAACTTGAAAAAGCCCGCTCAAATTTAATTGATTTAGTGACCACTGAAGAAGTTACCAAAGAAGCTGTTGAAACAGGAAACGAAGAAGAAGCTGAGAAAATTTCTAATATAGCAAAAGTATCACAACCTGAACCTGAAATTTTATTTTTTAGAGAGGAATATCCTATAGATATCTTTGAAAAGGAAGATGAGGAAGCAAGTTATTTTAAAACAAATAGCAAGCGTAAATGCTCTGAAAAGAAAAGTTTACATGACAAAAATATTGTAAAAAATAGTTCGGGGAAAATATCCAACAAAGAACAAAGTAATACTGAAATAAGCGAACTAAAATCCAATGAAAATCCGTATGAAGTTGGTATAAAATTTGAAGTAGAAATAATAGAAAACTACAAGTCCAATGAAAATGAATCTGAAGTGCATTCAGAATTAAAAAAAATAGAAAATGAATCTGCAGACAACAAAATGGAAAATGAGGAAGAATCTATTTGCCTTAAAAGACGAACTAAACGTCAATGCTCTAGAAAGAAAAGTACAAATGATAACAAAATTATTGCAAGAAAAAGTTCGAGGCAAAGATCCAGCAAAGACAAAAGTAAAATTGAAACTGATATAAAAAAACTGAAATCCAATAAAAGTCCAGATGAAATTGACAAAAAGATAGATGTTGAAAGAATAGAAAATAACGACAAAGAAAACAGTATGCAATTCGATGAAAATATAGATGAATTGAAAACAAAATTAGAATTAAAAACAGAAAATAACGCTAAACAAAATGAAATGGAAGAAGACGATCAGGATGATAGTTCCAGAAACGACGATGATACTTCCTCTGATGATTCAGGTCAATTAAATAAATTATCGGATGAAGACAAATTTATAGCAGAAAATTTTCAAATCTGTTGTGACATTTGTAAGATCCCACAGGATACATATTCCGCAGTGGTGAAACATTACAAAGATGTACACAATCAGCGTGGATATGTTAAGTGCTGCGGTACTAAGTTTGCGACTCGTGTAGAATTAGTGGACCATCTTAATGTCCACCAAAATCCCGAATATTTGAAATGCAAATACTGTACTAGAACATTTTCTAAACGTGTAAACCTGAAGAAACACATAAGATTTGCTCATGAGGAAAACAGGGTGGAATGCGACATTTGTGGCAGAAGTTTAGCAACTCAACCAGCTTTAAAAAGGCACATGCTTACACATAATACGGAAGATAAAAGGGTATATTGCACACATTGTGATAAATCCTATTTATCTATATACTCCCTACGCACTCACATCCGAGTGGTTCACTTTACAAATATAATATGCCATTTATGTGGCAAATCCATTATAATATACGACTTCACACGTCATATGGCAGAGCATGAAGGAAAACCTTTACCAAAGGTAAGCTGTAAAATGTGCGATCGCCAGTTTGCAGATAATAGAGGTTTAAATCGTCACGTGCGATCGCATCATCCACCGGAAGGAGCTTTAACTGAATTTAAATGTTCTGAGTGCCCAAAAGTGTTTTCAGCTGATTGCAATCTTAAGAATCACATTAGAAAGGTGCACAATATCACATATGTAAAGTGTACGCTGTGTGATAAAACATTTAAAGGAAAAATGGCCCTAATGGAACATATGTCTAGGCATAGGGGCGAACCCTTATACGTATGCGACTTTTGTTCTAGACCATTTTATTCCAATGGAAACTATCATTCACATCGCAAAATATGTTCTGCAAATCGAAAAGAAAAATCTGTAACGAAAAAAAAAGAAGATTAA
Protein Sequence: MSCLLCLEVTESYKDLIVFNCSEWQELNMQYIIEKYLWKLEVLNIRSYICQECWQELYNFHKFYLKLEKARSNLIDLVTTEEVTKEAVETGNEEEAEKISNIAKVSQPEPEILFFREEYPIDIFEKEDEEASYFKTNSKRKCSEKKSLHDKNIVKNSSGKISNKEQSNTEISELKSNENPYEVGIKFEVEIIENYKSNENESEVHSELKKIENESADNKMENEEESICLKRRTKRQCSRKKSTNDNKIIARKSSRQRSSKDKSKIETDIKKLKSNKSPDEIDKKIDVERIENNDKENSMQFDENIDELKTKLELKTENNAKQNEMEEDDQDDSSRNDDDTSSDDSGQLNKLSDEDKFIAENFQICCDICKIPQDTYSAVVKHYKDVHNQRGYVKCCGTKFATRVELVDHLNVHQNPEYLKCKYCTRTFSKRVNLKKHIRFAHEENRVECDICGRSLATQPALKRHMLTHNTEDKRVYCTHCDKSYLSIYSLRTHIRVVHFTNIICHLCGKSIIIYDFTRHMAEHEGKPLPKVSCKMCDRQFADNRGLNRHVRSHHPPEGALTEFKCSECPKVFSADCNLKNHIRKVHNITYVKCTLCDKTFKGKMALMEHMSRHRGEPLYVCDFCSRPFYSNGNYHSHRKICSANRKEKSVTKKKED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01399755;
90% Identity: -
80% Identity: -