Tlur023723.2
Basic Information
- Insect
- Tachina lurida
- Gene Symbol
- hang
- Assembly
- GCA_944452685.1
- Location
- CALYBZ010001507.1:155412-185882[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.17 17 7.0 0.9 3 23 455 476 454 476 0.92 2 19 0.35 34 6.1 3.4 3 22 579 598 577 598 0.90 3 19 0.0065 0.64 11.5 1.1 1 22 673 694 673 696 0.90 4 19 0.32 31 6.2 0.9 2 23 736 758 735 758 0.93 5 19 0.0017 0.16 13.4 0.2 3 23 813 834 812 834 0.96 6 19 4.5e-05 0.0044 18.3 0.1 1 23 842 865 842 865 0.96 7 19 0.00076 0.074 14.4 0.1 2 23 954 975 954 975 0.97 8 19 0.0014 0.14 13.6 2.7 2 23 1025 1047 1024 1047 0.95 9 19 0.0057 0.56 11.7 0.2 2 23 1056 1078 1055 1078 0.95 10 19 0.0039 0.38 12.2 0.1 1 23 1091 1114 1091 1114 0.95 11 19 0.00018 0.017 16.4 1.1 1 23 1174 1196 1174 1196 0.99 12 19 0.049 4.7 8.8 1.1 1 23 1204 1227 1204 1227 0.96 13 19 0.18 18 7.0 0.2 2 20 1235 1253 1234 1253 0.95 14 19 4.5e-05 0.0044 18.3 0.1 3 23 1319 1339 1318 1339 0.98 15 19 0.00073 0.071 14.5 0.4 1 23 1374 1396 1374 1396 0.97 16 19 0.0007 0.068 14.6 2.1 2 23 1490 1512 1489 1512 0.91 17 19 0.65 64 5.2 0.1 3 19 1533 1549 1532 1551 0.93 18 19 0.14 14 7.3 0.8 3 23 1567 1587 1567 1587 0.97 19 19 0.00082 0.08 14.3 0.7 1 23 1852 1874 1852 1874 0.98
Sequence Information
- Coding Sequence
- ATGTCGGATGAACGACACCAAATTCAGCAGCAGCAACAACAAAATCAACATTCACAGCAGCTGCAGAGGAGACATAATTGCTGTCGCCTTTGTCTAGCGCCAGACAACGAATGTATATCCATTTTAAATAGTTTTGCTGCCGACAAGGAACCATTAGCAAGTAAAATTAATACCTGTGTATCCGTTAAGATTTCCAGCACTGATAACTTATCACTACGAATCTGTCATGCCTGCATAAGCTACTTAAACTCTTGGCAATCTTTTAAGAATCGTTGTCTCGCAGCGCAGGCTAAACAACGTTCTTGGCAGGAAGTATCACACAAATCAATACAATCTGCCGAACAACATCACCAAACAGCAGATAATAGCTATGATGATACACAATATCAACACTATCAGCAGCAGCAGCAGCAGCAGCCTCATCAGCAAGATGAACAGTCATTGGCTTCTTCAATTTTGGAGGGAATTTCAACATTAAAAAAACGCAAATCGTTAACAGTCTATGTGAGTCCTAAATCGCAACAAACTAAACAACAACAAGAAAAATTATTACAAAAACAGCAACTAAATGTCACTATGCCGTTAACAAAACGTCACTATACCAAACATAAATATAACAAGTCACAGCAACAGTGGCAAAATCAAATGTCACAAAAAACAACAGCAACGCAATATGTACAAGCAATGTCTGGCAAAACCAAACAAAAATCGGACAAGAAACAAAGTTCAGCAAACCAGCAATCACTATTAGCCACTTGCGCTCCCTTACAACAATCATTTGTAATGCCAGCACTTCCCAGTGTGACTGCTACAGTAACTTCTTGCACGATAACTGCATCAGCTCTTGCCAGTAATGCAGCGCCGACAACTGGCTTAAATACTCCGACCAACACAACATTAACTAATACGACAATTGTGGCTACTGGCAGCAGTCGCGTCGAAACCGTAACAGCATCTACAAGCACTGCTGTTGCTAAAAGTACTGGTTCGGCTGTAAGAGTTGGTTCTAGTGACGAATGTTTGGGGGGTGCATCAAATACATCCTCATCGAGCATCGCTTGTACAAGTGCTGTGCAACAACTGCGTTTGTTTAGACGATACTCCTATAATCCGTTACCTGCAGTACAAATAAAAGACGAACCGGTGGAGGCTGAAGATGATTACAACGGAGCGAAGCATCTTCAACATGACGAATCGGATGATATGGTTGTAGATCCTACCATGTTTTTGGAGCGCACCGCCGACGAGGGTGAATTTATGGAATCTTCTTCCATTTACGATTATGATTTAATAAAACCACCTGCTGATATAAAGCCATTACCAGCTAGTACAACAATACGTATGAGCACTAAAGAGGCTGCTTGCCGTGCTTGCAATTTGAAATTTTCAACGCGCGCCAATGCACGACGCCATGAGAAGAACTTACATCCCAATCTCTTTGAGACTTTGGAAGAAAATGATCAGTCGATTAATAAACAAACCGCCGCGTTAAATGCCTCCTTAGAGCTACAAAGAGCTGTAGCAGCTGCTGTAGCCGCCGATGCTTGCAAACTATCCAGCGGTGCTGTTATAACACCACAAAAATATCGTCAAGAAGTTGTCAACGCTTTCAACAATAGTGAATTCGGATTTGATTATGATAATCCGGAGAAATACCGTGAGCTGTTAACAGACGAGAAGATCATCTTCCTTCAACAAAACGATGAATTCCTGAGACAATATCAAAACATGACTTGTCGCTGCTGTAACAAATACTATTCAACTTATAAAAATTTCATGGCTCATATGCGTAAAAAGTACCTAACACTACCCAGAAATTGTTGTTTCAATTGCTTAAAACTAAATGATTCCAAAGCATTGTTTATCTCACATTTGAAGAAGCGCAATTGCATAAATTTGCACAAAGTGTTGCATAATCTTATGGCAAGAAATGCTAACTTTGCAGCTGCTGTTACAGCAACAGTGGCGGCAGCTCCAGAAAAAGTACGTGCCAAAGAATTGTTGGTCAATAAAATGTACGAATGTAAACTGTGTCCAAAAACGTTCCGTCTAAAATTAGAATTCCGTTCACATGTCTACGATGAACATGACGATGTCCAACGCAAAGATGTTAGCAGTACTCAATGTTGTTATTGCGCTATAGATATCGAAGATCCAGCTGATCGTAAGCGTCATTATAACAATATGGATTGCATTGTCACATTACGATGTGTTACTTGTGACACAAAATATGAAACACAACAAAAGTTTATGGAACATGTGCAGGAAAAGCATTTAGCCAATTTTGGCGAACAGTCGAAACTTTCATTAAGTGCGGATAATTCTCCGGGTAAAATGATGGGAGGTGCATCATCAGCTGATGATTCACGAAGTGGTAATGTGTCACTCATTAATACCACACCTAAAACACAATACTTTTCACGTATGCCACAAGCTTGTCCGATTTGTGGCCAGCAATACAATAACTACAATAATGTTTTGCGACACATGGAATCAAAACATCCGGACCAGTTGCCACAAACTTATAAATGTGTTAAATGTGGACAAGGCTATCCAAGGTTATCAAATTTGCGAGAACATATGGTTAGCGCTCATGGAGCTGATAAAGCACGCCATACCGGCTTTGAGTATATAGTTAATGCAGATGCAGTTAAAAGTGCAACTGGATCTACATCTACATCCCAAAATCCCTACACAGGACGTTATGATTATGTCATGAAGGATTTAATGTCTATAACAAATGGTGGGACAATTGCCGAAGAAGATTGTGATAGTGAAAATGCAGCTAAGAAAATTCGTTTAGATGCCGGTATTTCTGTTAATAATAACAATGGGTCAGTCACCACTGTCAGCCAAAGAGAATGTTCTATTTGCAGCGCTATGTTTGCCAACAATATTGGCCTTTCCAATCACATGCGATCACATCAAAGTGCTGCTCAAAATAGTAATTATGGTACACAAAGTGCTAGAGCAGCGGCAAGTGGAAATGCCAACCAACAATCTATAACCGGTCAACAACAAATATTAAGAAAATCTTTGGAGCAGGCTGCTGACCGGCGCTTCCGTCGTATGCGTTGCCGTATTTGTCAGCGCCGTTTCTCTTCGAAGAAGTCCTATCGTTACCACATGCTCAATGACCATCAAATTCGTAATGTACAATTTATAAAGTGTAAATTATGTGACGCTGAATTTGCGTATGAAAAGGGTTTGAAAGTGCACATGTTTAAAATACATAATACACTTCTGAAGGATGATATGATTATAAAGCAATATGAATGTGAAATTTGTTCCATAGTGTACCGTACGGATGTAGAGCTGCAACATCATTTAGCTAATGTGCATAACAAGCAAGGAGATCCATCCAACATAGAAGATGAGGATGATATTTACAATGCGGATGAATCTATTGGCGGTGGTAATCGAGATAACAGTTCAGTGAGTGCTGATGTCTCGGGCAAAGCAACACCCGTTGGTGGAGGGGCTTCAGGAGCAGAAGCTCAGTTGGGACCCTTGTATTGGTATCAGTGTAAATATTGTCCCTCCAACTTTAATACAAATAAAAAATTGGCAATACATATCAATTCGCACGATGAGTTTGATTCGAATGATTATTCTTGCAAAGATTGTGGCAACCTGTACAGTGGACGTAAAAGCTTATGGGTTCATCGCTATAAGAAACATCCTCAAATACCAGAACCTTCCGAATGTGTTATGTGCAAAAAAGTATTCTTTGATGTTCAAATGTTGGAACATCATATCCCCTCATGTAATCGCAAACCTGTTACGCAAATGGGAAATGAATCTGCTACCACTACATACAAACATAAAACTGGCGATGATGAGGATGAAGATGATGATGAACACTCGCGGGACGCCGACAATACCTTAAGAACCTCCATTACAGCCACTGTGGGCAGTTCAAGTAATTTAAAAATAAAATTACCTGAAGTGGCTTGTACGATCTGTGGGGCTCGTTTCACTGACCAGGATCTATTCGCCAAACATATACAAATGCATGAAATGGAATTGTATACAGACAATCCGTTAGCGGCCATGTTTGATACAGGTCCCGCTGATCCAAATCAGTTCTATATGGATCGTATAAATGATAATGGCGAGTATGCATGCGATTTATGTGCAAAAACTTTTACACAAATGACAGCACTTAAAGTGCATAGGAAATGGCATTTCAGAGGTGATAGCAAACAGAACGAAGCCGATCAACATACGTCGAGCAACTCTCATATACAACACTCACACCACCATCAACAAATCGTCAAGTCACAGCAACAACAACAGCAACAACAACATCAACCACAACAACAACAGCAACATCATCATCAACAAGCGAAATCCAAGATGCCGATCAACCATCAACGTCTACTGGGATTACAAGCGGTGGGTCTAATGCCGCGTCAATTTGCCAATACCTCCTCCCACAGATCTCAGAAACGTAAACGTGAACTTAAATGTCCCCACTGTACCTCCACTTTCATTAGCAACAACAATTTGCGACGGCACTTGTTCGAATTGCACAAAAATGAAATGGGCTATTTACCTGAACCACCAAGAATAGAATGTGATCTACCAAATATGTGCAGAAAGTGTAATATGAAGTTTGAAACAAAAGGCGAGTGGATTGAACACAAAGTTGCAGAAGCTAGAGTTATGAGACCATTCGGACCATTTCAATGGGGTTGCGAGTTGTGCGGTGCATATGTATCTCGCAAAGAAAAGTTGATTAATCATTTGCACAATCATATGAAAGATCAAGTGATAGTCCCAGTGGAACGATCAGCTGAAGTGAAGAAACAAGAGTCGCAATCACAGTCCAAGCAAGAACAAATGCAAGAACAATCACAAACGCAATCACCTGGTGATCAAAAGCAACAACAACAAACCGAAGGCAATGACGTCATGCCGAAATTCAAAAAGATTATAATACCTCCATTGTCTCAGAAACACgaagtagatgaagaatcaagggatagtgttaaagatcaatatgacgaggatgatgatgaggatgacgatgacgatgacgatgaggaggagggtgaaggtgaaggtgaaggcgaaggtgaaggtgatgttgaagctgaagttgaagttgataataatgaaaatgaagTTGGCATAAAGGAACAGCAGCAACAGCACCTACAAAAACCACCTGTCGCAGAAGAATATGATGAAGATGATGAAGAGGAACAAGTTGAAGGAGCAGAGTTTGATGATTTGGCAGTAGGTGCTCAACagacggtgggtgatgatgacgatgtggacgaggatgacgacgatgaagatgaggatgacagtagtgatgcagatgatgaagaagCTTCTACCAACGAAGACACTAATGATGCCTCAATTCTTAAAGTCAAACCAGCAGCTTTAGCACAACCCCGCGCTTACAATAATATTGAAAACGACGATGTCGAAGAAGACGATAATTCCGATGACTTCGATGATGATGAAGATGATAATTCCTCTACTGAAAATCGAAAACCATCTTCAGCAGCAGTGGGTAATGTAGTTCTGAAGTCCCGTTATTCCTGTGATCTGTGCCAGGTGTACTTTGATTCACAACAAGAATTGCAAAAACACGTTAAAATGCATTTCCTTAATGGTCCTGGCTCCGTAACATTAACCGAAATCAAATCCTCTAAATCTTCATCTAACAAAAGCCGCAGCAGTAGTAGCGATGTTGTAGCCGTATAG
- Protein Sequence
- MSDERHQIQQQQQQNQHSQQLQRRHNCCRLCLAPDNECISILNSFAADKEPLASKINTCVSVKISSTDNLSLRICHACISYLNSWQSFKNRCLAAQAKQRSWQEVSHKSIQSAEQHHQTADNSYDDTQYQHYQQQQQQQPHQQDEQSLASSILEGISTLKKRKSLTVYVSPKSQQTKQQQEKLLQKQQLNVTMPLTKRHYTKHKYNKSQQQWQNQMSQKTTATQYVQAMSGKTKQKSDKKQSSANQQSLLATCAPLQQSFVMPALPSVTATVTSCTITASALASNAAPTTGLNTPTNTTLTNTTIVATGSSRVETVTASTSTAVAKSTGSAVRVGSSDECLGGASNTSSSSIACTSAVQQLRLFRRYSYNPLPAVQIKDEPVEAEDDYNGAKHLQHDESDDMVVDPTMFLERTADEGEFMESSSIYDYDLIKPPADIKPLPASTTIRMSTKEAACRACNLKFSTRANARRHEKNLHPNLFETLEENDQSINKQTAALNASLELQRAVAAAVAADACKLSSGAVITPQKYRQEVVNAFNNSEFGFDYDNPEKYRELLTDEKIIFLQQNDEFLRQYQNMTCRCCNKYYSTYKNFMAHMRKKYLTLPRNCCFNCLKLNDSKALFISHLKKRNCINLHKVLHNLMARNANFAAAVTATVAAAPEKVRAKELLVNKMYECKLCPKTFRLKLEFRSHVYDEHDDVQRKDVSSTQCCYCAIDIEDPADRKRHYNNMDCIVTLRCVTCDTKYETQQKFMEHVQEKHLANFGEQSKLSLSADNSPGKMMGGASSADDSRSGNVSLINTTPKTQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGQGYPRLSNLREHMVSAHGADKARHTGFEYIVNADAVKSATGSTSTSQNPYTGRYDYVMKDLMSITNGGTIAEEDCDSENAAKKIRLDAGISVNNNNGSVTTVSQRECSICSAMFANNIGLSNHMRSHQSAAQNSNYGTQSARAAASGNANQQSITGQQQILRKSLEQAADRRFRRMRCRICQRRFSSKKSYRYHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDDMIIKQYECEICSIVYRTDVELQHHLANVHNKQGDPSNIEDEDDIYNADESIGGGNRDNSSVSADVSGKATPVGGGASGAEAQLGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNLYSGRKSLWVHRYKKHPQIPEPSECVMCKKVFFDVQMLEHHIPSCNRKPVTQMGNESATTTYKHKTGDDEDEDDDEHSRDADNTLRTSITATVGSSSNLKIKLPEVACTICGARFTDQDLFAKHIQMHEMELYTDNPLAAMFDTGPADPNQFYMDRINDNGEYACDLCAKTFTQMTALKVHRKWHFRGDSKQNEADQHTSSNSHIQHSHHHQQIVKSQQQQQQQQHQPQQQQQHHHQQAKSKMPINHQRLLGLQAVGLMPRQFANTSSHRSQKRKRELKCPHCTSTFISNNNLRRHLFELHKNEMGYLPEPPRIECDLPNMCRKCNMKFETKGEWIEHKVAEARVMRPFGPFQWGCELCGAYVSRKEKLINHLHNHMKDQVIVPVERSAEVKKQESQSQSKQEQMQEQSQTQSPGDQKQQQQTEGNDVMPKFKKIIIPPLSQKHEVDEESRDSVKDQYDEDDDEDDDDDDDEEEGEGEGEGEGEGDVEAEVEVDNNENEVGIKEQQQQHLQKPPVAEEYDEDDEEEQVEGAEFDDLAVGAQQTVGDDDDVDEDDDDEDEDDSSDADDEEASTNEDTNDASILKVKPAALAQPRAYNNIENDDVEEDDNSDDFDDDEDDNSSTENRKPSSAAVGNVVLKSRYSCDLCQVYFDSQQELQKHVKMHFLNGPGSVTLTEIKSSKSSSNKSRSSSSDVVAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00760325;
- 90% Identity
- iTF_01074706;
- 80% Identity
- -