Basic Information

Gene Symbol
cdc5l
Assembly
GCA_944452685.1
Location
CALYBZ010000726.1:162310-167476[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 1.6 3.6e+03 -0.9 0.0 10 43 157 196 155 199 0.74
2 5 4.2e-11 9.7e-08 32.9 0.1 1 44 205 249 205 251 0.92
3 5 1.3e-05 0.031 15.3 0.1 2 45 260 307 259 308 0.84
4 5 5.6e-12 1.3e-08 35.7 0.0 3 46 317 361 315 361 0.93
5 5 4.2e-06 0.0098 16.9 0.3 3 45 369 412 367 413 0.95

Sequence Information

Coding Sequence
ATGACATCCAACTATGATCCTTCGATGAAAACTCAATTGGAAAGAGCATTATCCTTTAACAGTGAAATGCAAGCCGAATTAGTGGTAATGCGAGACAAGCTCGAGACTCTACTGACAACCGTAAAATCTACTTATGAAGCTAATGATCTCTTACTGAAGGAAGGCCTTTTAAGGAAAAAGAGGACAGGAGTAGGAATGAAAGGAGCTTATTTGAAGGGATCGACTTTCTATTTGAAAGGCAATATGTTTTTTCGAGATATAAAATGTCGTACTTGTCCAAATAACAAGGATTATGAAAAAAGAAAACGGGAAAACGAAATGTTTCCAATGGATTTTAATTTGAGAGCTAGACACGTCTGGTCTACTGCAGATAAACAAGGAATTATCCTGGGTATTAAGGAACAAATAATCGATCATCTGAAATTATCCTCTAAGCGGTATGGAAAAAAAAGTAAAGTAATAGATAGTGAAAAGTTGACGAAACTTTTGAATATGGCTCCCGATGACTTCCGTATTGATTGGGATTATATATCAAGTGCGAATTTGTTACATCGCCATTCAGCTAAAAATTGTGAAGCCATTTGGAATTTATTCCTGCATCCATCTTTAAATCGGTCTTCATGGTCTAAAGAAGAAAACAACAAACTTTTGGAAGCTGCCAAAAAATATGATTTCCAAAATTGGCCAGCAATAGCAAAGGAGGTTGGACAACGCTCAGATTTTCAGTGTTTTGTACAATATAAAAATAACGTATATCAAAATTTGCCGGAACCTCACACTAAATGGTCAAAAGAAGATGACAAACGTCTTCTTGATGCCATAGCTAGAAATACTGTGAATGGAAATATCAATTGGAGCATTGTTAATACATACTTTCCACATAAGGCTAAGACTACACTTCATTCCCGCTATAACTCTACTCTCAATCCAAATATACAACGTGGCGCTCCTTTCACAACGGAAGAAGATCTACTTTTGATAGCAGCGGTGAAAGAATATGGAAAAAGGTTTGGCTGCATACCACGTAGTCTGTTTCCCAATCGATCTGTAGTTCAATTGCGCACCCATTACAATAATGTTTTAGCCAAACGGCATAAACACCATCCATGGTCGTTAGAAGATGACATTACATTAATGAACTTTGTATCTGAAAATGGCATGAAGTGGGTAGAATGCGAAAAACGATTGGAGGAAAGACACACACGACTCAGTTGCCGCACAAGATATGTAACAATTAAGAAATATCTTGAAAGACATCCAGGTAGTACCATTGAAAATTTGCCCAGGAAAAAGTCTAGCATAATTAGAAAAAATGTAAATTTTAACAATTGGAAACAAAAAGTTGAAGAAATCTCCCTAAGCTCAAATGGCGTAAAATCAAAAGCAAAGAAAAGAGTAGAGAAAAAGGTTGGAAAAGATAAACCTGAAAGGACCAAAAAAGACAAAACTAAAAAAAGGAAGAAAGAAGGAGAAGATAATAAATCTGAACATGAACCAGCTGAACAAATGGCGATTGAAACTAAAGCAAAAAATAATTATATAAGCAAGGTCAACAAACCTTATATTAGCAGATTAAGGACAAATGAGAGAAAAAATTATGACTTTTTCAAATATGCATACAGTTTTGAATTAAAACGTCATCCCTGCGACTTTATTCAAATAAAAGTAGCCGATTTTTCTATTGTTACATCTGCATTAAAACCGCAAATACCATTTTATGATTTCGATACAAGTATACCGCGGCGTATCAAGGACAACATAGAACAAATTGCTCCAGAATTATCAAGTTGCCAAACACTTGAACTTTTACCTCCAAATTGGTCTACAGCTATGGGATTTCGCGCATTGTGCATTAACACTGCATCTATTTTGCCTATTTTATCATACCGGAAACCAACAAACGATATAAACAATGAATATATTCAAAGATTCCGTGAACGCTTGCGTTTTATTTTCTTCTCCACAGCTCTTCTCAGTCGATTAAGTCCTGAGGTTGTGGGAATAAATACGGTTATAAATGATAAAACGCCAAAGACGTTTAGACGAAAACGATATCATAAGGGAAGGAAAGATAGTGGATACGATGGAAACAAAAAGAAAAGAGGCAATACACTAACGAATTTACAGGCTGCGAATGATGATAAATTACTAGCAGTTATGCAAACAATTGTGGATTCGGAACGCTGA
Protein Sequence
MTSNYDPSMKTQLERALSFNSEMQAELVVMRDKLETLLTTVKSTYEANDLLLKEGLLRKKRTGVGMKGAYLKGSTFYLKGNMFFRDIKCRTCPNNKDYEKRKRENEMFPMDFNLRARHVWSTADKQGIILGIKEQIIDHLKLSSKRYGKKSKVIDSEKLTKLLNMAPDDFRIDWDYISSANLLHRHSAKNCEAIWNLFLHPSLNRSSWSKEENNKLLEAAKKYDFQNWPAIAKEVGQRSDFQCFVQYKNNVYQNLPEPHTKWSKEDDKRLLDAIARNTVNGNINWSIVNTYFPHKAKTTLHSRYNSTLNPNIQRGAPFTTEEDLLLIAAVKEYGKRFGCIPRSLFPNRSVVQLRTHYNNVLAKRHKHHPWSLEDDITLMNFVSENGMKWVECEKRLEERHTRLSCRTRYVTIKKYLERHPGSTIENLPRKKSSIIRKNVNFNNWKQKVEEISLSSNGVKSKAKKRVEKKVGKDKPERTKKDKTKKRKKEGEDNKSEHEPAEQMAIETKAKNNYISKVNKPYISRLRTNERKNYDFFKYAYSFELKRHPCDFIQIKVADFSIVTSALKPQIPFYDFDTSIPRRIKDNIEQIAPELSSCQTLELLPPNWSTAMGFRALCINTASILPILSYRKPTNDINNEYIQRFRERLRFIFFSTALLSRLSPEVVGINTVINDKTPKTFRRKRYHKGRKDSGYDGNKKKRGNTLTNLQAANDDKLLAVMQTIVDSER

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01074406;
90% Identity
iTF_01398421;
80% Identity
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