Tlur024501.1
Basic Information
- Insect
- Tachina lurida
- Gene Symbol
- lola
- Assembly
- GCA_944452685.1
- Location
- CALYBZ010001581.1:634395-636617[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-11 2.2e-08 34.6 0.0 4 45 419 460 416 460 0.91 2 2 5.3 9.6e+03 -2.7 0.9 4 20 558 573 558 573 0.86
Sequence Information
- Coding Sequence
- ATGGGCGGTCCTCCGGCCCCAACGTCCTCCAATGGTCCCCCAGAGGGTCAAACATATTGCTTGCGTTGGAATAATCACAAATCCAATTTGGTAGAAATATTAGATGCTCTCATAAAAGTTGAAAGTTATGTAGACTGCACCATAGTCGTAGATGATCAAGTGCAATTCAAAGCACATCGTGTAGTTTTGGCTGCTAATTCACCATATTTCCAATCCATTTTGCAGGATTTGCCCATGGATCATTGTAGTATTATATTCCCTGGTGTGAAAGCCTTTGAGATGCGTGCATTATTGGAATACATGTACACAGGAGAGGTGAATGTTACGCAAAGTCAAATACCTAAAATAATGCGCATTGCGGAGGAATTAGAGGTGAAAGGTCTTTTCGACATGGCTGACTTGAAAGAAAAATTTAACAAATTGAGTGAAGAGCATGCTGAAAGATCCATAAGTAATCCTTATACCAGTACCGCAGCTCCCTCCAATCCCTATTCCTCTGTCACCACTACCTCCTCACCCATCACTGCCATACCGAATCACAAGCCCAGTTCAAAGGATTCGGATAACTATCGTAACAATTCCTCCTATGTGATCTCTACCTCAACGAACATTTCGCCTTCAGCTGCTCCCTCCAGCAGTTCCTCGCCCCCATATAGCAATTACAAATCGCCCTATTCTAGCTTGTATGCCAAATCGCCGGGCCCCCATTTAACTCAGTCCTCAGCGGTTCCACCTCAATCCAGTCAACAAACTCCCACTAACCTTACGCCCACCAGTGAGCGTTCCTCTCAATGGCCTTTGTCACCTTCGGCAGCTGCCGCTGCTGCTATGTTAAGTTCCGTTTATGAATCTGCTCCTGATATGAACCCTCTAAAACGCAAAAAGCTCTCCTCCATGTCAAGTATGTTAATGAACCGTGACACTCCAATATTGCGCAATGTTTTAGCACAAACCAATCCGGCTGACTCTTCACAACAATTGCCTCTGCTGTTGCCCAATGCAGTAGCCAACACTAAAATCGACAGTAAGCCTTCAAACTTGGACAAGAATGTAAGTGGTCATATTAACAATCACAGCTTTAATGGTTCAGATTACAGTGAAAAGAAATACCCAGATGAGCCACATTCCCCTTTCACTGATCGTTCCTTCGAAGACGATAGTTTTGATCAGAAAGGCAGCAATTTCGGAAGTAATTTCGGCAATAATTCCAACCAAAAACCCGAATGGAAACGTTACAAACAATATACGCGCAGTGACATCATGTCAGCAATACAGTGTGTACGTGAAGGCATGAGTGCTTTGCAAGCTTCACGTAAATTCGGTGTGCCCTCACGTACACTGTATGATAAAGTCAAGAAGCTGGGCATAACTACTGGCCGTCCCATGAATCGTACCATGAAACGAAGTCCCAGCAGTGCTGAAACATCAGCTGCCTTCCCCTATGCTCACGGTTATGGGCAAGCTACGGCTGCAGCTGCTGCTGCCATGCACGATGCTGCTGCTCGTGACGATCGTGAATTGAAAGAACATCATCGCACTAATGAACACCATCATTTACCATCCACCATTCCTCACCCAGCTGCTGCCTTATTAGATCACGCTTTCCTACAACAGGCCTTAGAAAATCGTGGTGGTGGCGACATTGCTGGTCGTGAAGCTCTTCATGCCATGGCGTTAGCAGCTGCTGCTCATGCGGCCGCCAATCGCATGTCCACTAGTCCAGGCCCCAACGGAAATGCTGTTCGATCTCCTAGCCCTACTAATTTCGCTCTGAAATATGGCACTTTACGAAATGCAGAACAAGAGCTAATGGAACGCCACGAATTTGAACGTGAGCGCGAGAGAGAGCGTGAATATGCAGAAAGGGAGATAGAGCAAGAGAGAGAACGTGACATGGAACATGAACCTGAGGAGGAAGATGATCATGTTGAGGATTTGTCAGTTGCACGCAAAGACAGCAACCATTCCCCACCGTTAGAACCAAGAGATAGACCTGCATCCCCCTACTCACCCAAAGTGCCAGCCAATGGAGATAATGAAAAGTCTGTTATAATGACAACTAAATTGCCCTCAAATCCCAGTAACGAAGCCTTTATGAATGACACAAGTATGAAACGTGAACTTGTAATAGATGACGTCAGAGCCGACTGA
- Protein Sequence
- MGGPPAPTSSNGPPEGQTYCLRWNNHKSNLVEILDALIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDLPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFNKLSEEHAERSISNPYTSTAAPSNPYSSVTTTSSPITAIPNHKPSSKDSDNYRNNSSYVISTSTNISPSAAPSSSSSPPYSNYKSPYSSLYAKSPGPHLTQSSAVPPQSSQQTPTNLTPTSERSSQWPLSPSAAAAAAMLSSVYESAPDMNPLKRKKLSSMSSMLMNRDTPILRNVLAQTNPADSSQQLPLLLPNAVANTKIDSKPSNLDKNVSGHINNHSFNGSDYSEKKYPDEPHSPFTDRSFEDDSFDQKGSNFGSNFGNNSNQKPEWKRYKQYTRSDIMSAIQCVREGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSSAETSAAFPYAHGYGQATAAAAAAMHDAAARDDRELKEHHRTNEHHHLPSTIPHPAAALLDHAFLQQALENRGGGDIAGREALHAMALAAAAHAAANRMSTSPGPNGNAVRSPSPTNFALKYGTLRNAEQELMERHEFEREREREREYAEREIEQERERDMEHEPEEEDDHVEDLSVARKDSNHSPPLEPRDRPASPYSPKVPANGDNEKSVIMTTKLPSNPSNEAFMNDTSMKRELVIDDVRAD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00258994;
- 90% Identity
- iTF_01138148;
- 80% Identity
- iTF_01399582;