Basic Information

Insect: Tachina grossa
Gene Symbol: ci
Assembly: GCA_949987645.1
Location: OX465279.1:3673728-3699590[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.028 3.6 9.7 0.3 3 23 413 436 411 436 0.94

2 5 0.15 19 7.5 0.2 1 23 444 471 444 471 0.84

3 5 0.029 3.7 9.7 5.0 1 23 477 501 477 501 0.97

4 5 0.00048 0.062 15.3 0.4 1 23 507 532 507 532 0.97

5 5 0.00064 0.082 14.9 0.2 1 23 538 563 538 563 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.028	3.6	9.7	0.3	3	23	413	436	411	436	0.94
2	5	0.15	19	7.5	0.2	1	23	444	471	444	471	0.84
3	5	0.029	3.7	9.7	5.0	1	23	477	501	477	501	0.97
4	5	0.00048	0.062	15.3	0.4	1	23	507	532	507	532	0.97
5	5	0.00064	0.082	14.9	0.2	1	23	538	563	538	563	0.97

Sequence Information

Coding Sequence: ATGAGATTAATGGAAGAGTTCCCGCTTCGTAACACTGACATCGAGTCTTATTATGAGTTCGTTGGGAAAGTGGAAATTGTGGTATATTATTGCGCAGCGACAAGCAGTATAGATATCAGCGCAATGTTTGCAGCCATGGTGGAGAGATTTAGTGAAATGAAAGTAAAAGATAAGGATTACAGAGGTTACATTGGCTGGgatacacctaATCCTTATTCAAATTGTGCAACAGCTTTTCATTTGACTGGACTAGGCCTAAGTTCTGGTGATTATTTGGGAGCACGTGGCGTGAGTTCATTAGGTGAATTGCATCCCGCAGCAGCTGCAGCAGCAAATTCTTTGGCGAGCACTGATTTTCATTTTAGTATTGATAATGCCAGGCTTAGTTCGTCACGCAATGGGAGCATACGAGCAAGTATTAACCGCAAAAGAGCACTCTCATCTTCTCCGTATTCAGATTCATTCGACATTAACTCCATGATACGATTTTCCCCTAATTCACTGGCAACTATAATGAATGGTTCTCGAGCCAATAGTGCAGCTAGTGGTTCATATGGTCATTTGTCAGCTGGTACCATGAGTCCAATTCACAGTGCCATGTCACCACACTTGCAGCAATTACAAGCCCATTTGCTAAGAGCTAGTGCTGGACTGTTGCATCCACTTCCCACACATCAAGCAGCGGCTGCTAACATGCTCTCTATGGGTCATGTACATACTTTACAATCAGCTGTCGCTGCTGCAGCTGCCTACAATGCGGCGGCAGCTGCCAGTGGTAGTACTGGCAACGCAACGGCTAACAGTTTGTCATTTCATCATCCGTTAAATGGTCACACAAGTGTTCATGCTGATAATGTTGTGAACAGCAATCAAAACAGCATCATAAATAGTACAACTAAGCAAATGcATTATGAAGAAATATGTACGGATCGATCTAAGGGAGAACAACCTTCGTCCACCTCGCACAATGATATTACTCAACAGGAAGCCGATAGTGCTTCTTCCAACTGTGCAGCTGCGAGAAGACAGCAGCGAACTAATAAAAATTCGAGTAATAATTCTACCGCTACCTCAACAACAAATCAGTGCCAACTCAACAAAAGCAATAGCAGCATCAATAATAACCAGCTGCAATGTGGAACACCAACAACAACTACACCACACAGTGATTATGATTGCGCCACTGTCGATACAACTGATATAAAAGATGAACCAGGAGATTTTATAGAGACTAATTGTCATTGGCAAGATTGTGGCATTGAATTCTTAACGCAGGATGAATTAGTTAAGCATATAAATAACGATCATATACAAAGCAACAAGAAGGCATTCGTTTGCCGTTGGGAAGATTGTTCCAGAGGTGAAAAGCCTTTCAAAGCTCAATATATGCTTGTCGTGCACATGCGTCGGCATACTGGAGAAAAACCACACAAATGCACTttCGAAGGATGTTGTAAGGCGTATTCTCGATTGGAAAATCTAAAAACTCATTTACGGTCTCACACTGGTGAAAAGCCATACACTTGTGAATATCCAGGATGCAGTAAGGCCTTTAGTAACGCCAGCGATAGGGCTAAGCATCAAAATCGTACTCACAGTAATGAGAAACCATACGTTTGCAAAGCACCTGGATGTATTAAGCGTTATACGGATCCTAGTTCGTTAAGAAAACATGTTAAGACTGTTCATGGTGCTGAATTTTATGCCAACAAGAAGCACAAAGGCTCAATTTATGACAACAATCAGTCGGGTGGCAGTGCTGGCAGTAATGTAGACAAAGTCGACTCACCTGATGACTATCGTTCGAACAAAGCCACAAGTTTATCAAGTCCAAGTATTAAATTTGAATCAGAAGCCAATTCACCTCCTCAGTTGTCTGTGCATAGTCCGACAATTTCGCAAAATGGTGGTAATCAAACTGCTCATAATCAACTGCAATTTAAGTCCAATAATACAATGCGAATAGGAGCAGTAAATGAAATGGGTGATGTTATAGCAGCCTATAACAATCACGGTGATTACGGAAACATGGTAACAAATGAAAATGAAGTTTGGACTTACGATGATGACGTAGATGCATCCGACTTACCTATTGTACTTAGGGCCATGGTCAGTATTAGTAACAGTCCGAACAATAGTATGGTAGACAATAGTGGAGGATCATCTTCGATATCCGCTACTACTATGCGACAGCGCTTTCGGTCACGTTTACAAGCCAAGGGATTGAACCTTAACTCACCTGTGCTATCCAATATACCAGAAATCAATCGTAATATTGGTATCGGTGAACTCAATCAAcgtataacaaatttaaaaatggaacCAGCTACAGTGGGACCACCTCATTCCAAATATAACGCTGATATGAAAAATCCACCTCCATTCTCCACAAATTTAAACGATTTACAAATTCGTTTGTGTACACACACGAGCTCGATGATGAGTAACAGCAACGGCGATTCGCTTATTCAAAGTAATATGCGCCGCGATAGTCAAAATTCAAATGCCAGTACATATTACTGTAGCATGCAAAGCCGACGTAGTAGTCAATGTTCTCAGTTGTCTTCCATTTCAACGATGCGACCTTGTTCGTACAATGCTGGATCATTGTACGATCCCATATCTCCGGGTTGTTCAAGACGTTCAAGCCAAATGTCTAGCGTAACCTGTGGTGGCTTGAGCTCTGCAAATATAAGTGGAGCCAATGTAACTGATCCTAGCTCCAATTGTCGAGTCAACAACTCCTGCTTAGTTAACACTCTTAATACATCTAATAATCCAAGTCTTCCACCGCCTCCATCTTCACATTTATTTTCAACGCACTTGCAGCGTTTACAGACATCCTCAACAGCTGTGATTAAGCAGCCTCATGAAAATGGTCGCTTTTCTATACCCAATGCCCTTAGCGCTTCTCAAACGGGAAGTCATATAGCACTGATAAAGAGTGAAGAAAGTAATGGCCAAATGATAGGACGTCGTCTTTCAGAAACAGACAAACAGTTATATGAAAGACTTGTACCTACGCCAACTAAACTAACTAGTAATTTCCAAAATGTATCTGTGACTAACTCAAAAACATCTACCAAAGCAACAGCACCAGCCACAACAAGCGGTACAACAGAAACATCAATGGATCATCATCCGAATGAAAAAGTTAATTTGGACGAAGTAGAGGAGGACGAACTTATTGAAAATAAGCTTGTACTTCCTGATGAAATGTTGCAGTATTTAAATCAAGTAGCAGATAAGACAACtactaaaaataacaacaacactgGTAAAGAAAATGTTCCTCAGGCTTCTTACCAACCACCCATGCCTTCACCGAACTTATACCCCAATAGTCCCGAAAGTCCATCCATCACTCAAGTCATGTCACCCCAATCTGGTCATACCATGTCTGGTATGGGCAGTCCCTATTCTCAGCGTAATTACGATCACCGAGCAACAAAAAATCAACGTCGACAGTATGcgttttattatgattactaCCACGAAGGCGCTGAACATTCCAGTGGCCACACAAATAATGCCGAAAATTACTTCTGTTCCAAACCTGCGCTAGAAGCGAGACCCTATGCTCAAAATATTTCTGCTCCTGCCGATAGTTCAATGACTAGCTTACCAGATATTAGCAGTAACGAATCGAAATCTAATTATTACGCCAATACAACAGCCACACGAGCACAAACGCCAAATCAAAAGAAATCTCAGCAGCGTAATAATATTGTACAAAAGGAAATACAGTGTCAGGATATAACCCAATCACAAATGTCACCAGCGTTAATGAAACCGATGTCTACATCATGTAGCAATAATATGGACATGAGCTGCCCGCAAAATTCGCTTGCATTTAGCCAACATATGCAATCATCAGCAACGTGCTATAATGCAGCCAACAATCGCAATATTAATACAAAAGGTAGCAGTAGTAATATGTGCACTGATGCCTATCAACGCACTTTGGAATATGtacaaaattgtcaaaattggcTCCAAACCAAAAAGATCCCAAATCAAAATACATCAAACAGTGAATTTGTTGTGCCTCCAGTGCCAAATTCAAATCTATTACCAAGTAGCCATCAGCGACATCATCAGCCACATGTTACCAGTTCAACACATCCTTCTCCCAATATGGTCATAAATGATATGACTACGTCATTGAACTCTCTGTTGGAAGAAAATTTTTATCTACAAATGATTCAGTAG
Protein Sequence: MRLMEEFPLRNTDIESYYEFVGKVEIVVYYCAATSSIDISAMFAAMVERFSEMKVKDKDYRGYIGWDTPNPYSNCATAFHLTGLGLSSGDYLGARGVSSLGELHPAAAAAANSLASTDFHFSIDNARLSSSRNGSIRASINRKRALSSSPYSDSFDINSMIRFSPNSLATIMNGSRANSAASGSYGHLSAGTMSPIHSAMSPHLQQLQAHLLRASAGLLHPLPTHQAAAANMLSMGHVHTLQSAVAAAAAYNAAAAASGSTGNATANSLSFHHPLNGHTSVHADNVVNSNQNSIINSTTKQMHYEEICTDRSKGEQPSSTSHNDITQQEADSASSNCAAARRQQRTNKNSSNNSTATSTTNQCQLNKSNSSINNNQLQCGTPTTTTPHSDYDCATVDTTDIKDEPGDFIETNCHWQDCGIEFLTQDELVKHINNDHIQSNKKAFVCRWEDCSRGEKPFKAQYMLVVHMRRHTGEKPHKCTFEGCCKAYSRLENLKTHLRSHTGEKPYTCEYPGCSKAFSNASDRAKHQNRTHSNEKPYVCKAPGCIKRYTDPSSLRKHVKTVHGAEFYANKKHKGSIYDNNQSGGSAGSNVDKVDSPDDYRSNKATSLSSPSIKFESEANSPPQLSVHSPTISQNGGNQTAHNQLQFKSNNTMRIGAVNEMGDVIAAYNNHGDYGNMVTNENEVWTYDDDVDASDLPIVLRAMVSISNSPNNSMVDNSGGSSSISATTMRQRFRSRLQAKGLNLNSPVLSNIPEINRNIGIGELNQRITNLKMEPATVGPPHSKYNADMKNPPPFSTNLNDLQIRLCTHTSSMMSNSNGDSLIQSNMRRDSQNSNASTYYCSMQSRRSSQCSQLSSISTMRPCSYNAGSLYDPISPGCSRRSSQMSSVTCGGLSSANISGANVTDPSSNCRVNNSCLVNTLNTSNNPSLPPPPSSHLFSTHLQRLQTSSTAVIKQPHENGRFSIPNALSASQTGSHIALIKSEESNGQMIGRRLSETDKQLYERLVPTPTKLTSNFQNVSVTNSKTSTKATAPATTSGTTETSMDHHPNEKVNLDEVEEDELIENKLVLPDEMLQYLNQVADKTTTKNNNNTGKENVPQASYQPPMPSPNLYPNSPESPSITQVMSPQSGHTMSGMGSPYSQRNYDHRATKNQRRQYAFYYDYYHEGAEHSSGHTNNAENYFCSKPALEARPYAQNISAPADSSMTSLPDISSNESKSNYYANTTATRAQTPNQKKSQQRNNIVQKEIQCQDITQSQMSPALMKPMSTSCSNNMDMSCPQNSLAFSQHMQSSATCYNAANNRNINTKGSSSNMCTDAYQRTLEYVQNCQNWLQTKKIPNQNTSNSEFVVPPVPNSNLLPSSHQRHHQPHVTSSTHPSPNMVINDMTTSLNSLLEENFYLQMIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -