Tgro038237.1
Basic Information
- Insect
- Tachina grossa
- Gene Symbol
- Znf711
- Assembly
- GCA_949987645.1
- Location
- OX465277.1:108407044-108408867[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 6.3 8.1e+02 2.3 6.3 2 23 268 290 267 291 0.95 2 10 0.38 49 6.2 0.1 6 23 299 316 299 316 0.99 3 10 0.00012 0.016 17.2 1.9 1 23 322 344 322 344 0.98 4 10 0.098 13 8.0 0.5 1 23 354 376 354 376 0.84 5 10 0.059 7.6 8.7 3.7 1 19 384 402 384 407 0.92 6 10 0.0026 0.33 13.0 0.2 3 23 415 435 414 435 0.96 7 10 0.0015 0.19 13.8 0.4 2 23 444 466 443 466 0.96 8 10 9.1 1.2e+03 1.8 1.5 3 23 476 497 474 497 0.72 9 10 1.5e-05 0.0019 20.1 1.8 1 23 503 525 503 525 0.96 10 10 1.5e-05 0.0019 20.0 3.9 1 23 531 554 531 554 0.97
Sequence Information
- Coding Sequence
- ATGGATATTTGTGTGGTTTGTTGTCAAGCAAATGAAAATGCATTTTCCCGCATTGTTACTTCATCGAACGAGTGGAAAGAGTGGAACATTCAGCGCATTATAGAGAAACATTTGTGGTGGTGGTATTTGAGGCCATCAGTCAACGATGGAAAAGATAGATGGATTTGCCGCCAGTGTTGGCTTGAATTATCATCTTTTCACGACTTTTATATTAAAGTTGAGAAAGAGCATcaactaaataaaatatcattagTGAAAAATGATGATAAGGATGAGGTGGCAAATATAGATATTAAATTGGAAGAACAAAGTTTTGAGAATGCGTCCATACCAGCAGATAATGTAACCCATTTGAATAAACGCAAAAGGGGGCGAAAAAAGAAAGCCGTTGTCAAACCTGAATGCGTTCAAATAGAGGAAGTACCTATTGTACAAGTCAAGTacgaaaatgaaacaaatgATTCAACTGAAGCTCCACACACCGAATTAGATGTTGATGTGTTGATTAACGAAGATATTAGTTCCATTGACGATTGGGAGAACTGCTTTTTAAGAGAGAATGAAGAAGATTCTGATgaagaatatacatataataaagaaatttctGATGAACTTAGCTTACTTAAAATATCTAGACGAAAAGTTAAAACAAAGCCCAAAGCTGTCACCAAATACCGGACAAAgtatacaaaaactaaaaaggagAAACAAATTAAAGTAATAAAGAAAAGTACGAGCTCAAATGCTTTGAATGCCATGAGAAAAAACGACCAATTTATTACTGACAACCAGTTCCAACTCTCTTGCTGTATATGCAACATATCGTTGGACAATTTTAActgtttaaaaattcattttcgcAAAGAACATCACATTTTGGGGTATGCTATGTGTTGCAATAAGAAGTTTTACAAGCGTGGAGTTTTGGTCGATCATCTAAATGTTCACAAAGATCCCGATTATTTTAGGTGCCTGCAATGCAACAAAGCGCTTTCTACTCGCCGCAGCTATGAAAAGCACATGGAAACTCATCAGCTGTATGAAACTCGCCATACTGTGTATAATTGCGAGCAATGTGATAAATCATTTTTGAAAAAACCTGTCTACGACCGCCATGTTTTAATTCATGTACCTGAAGAAGAGAGAACCTTTCAGTGTAACTTGTGTGATAAGAAATTTGCGTCAGAGTATCTTCGAAAACAACATTGCACCCTGACACACTCAAAAAAATACGCTAAAATTTGTGATATTTGCGGCAAGCTATTGAGGGATAGCTTTTCGTTTCTCCGTCATATGGCAGAACATAAAGGGGAAACAATTGCGAAAGTAGAATGCGAGATATGTGGTGCACAACTCACAAATAAATATCGCCTAAATCGCCACAAAAAAATGATGCACACAGAAGAAAATCAACAGGCGCAAATATGTCCATATTGTTCAAAAATATCACCCAACGTGAATGCTCATCGACACCACGTGAAGTATACACACACTCTGGAGCGCAAACATGCATGTAATATGTGTGATAAGAAATTCAGAAGGCCTTTGGAATTGAAGGAACATTTAAGCACACATACCGGAGAGCCCCTCTATACTTGTCCTCATTGTCCTAGAACTTTTATATCTAGTGCAAATATGCATAAACATCGTAGGCTGACGCATCGCAAAGAATGGGAAGAGGGAAAATTGAAAAAGGAAGCAAAAGCATTGGCtgggaaaaaatttttgaatgcTTTGAATGCAACACAAAACGAGTATGCGGGACTTGAGATATTGGATCCTGGAAATGAATCGGTACCAAATTTAGCAGCTTTagaattttga
- Protein Sequence
- MDICVVCCQANENAFSRIVTSSNEWKEWNIQRIIEKHLWWWYLRPSVNDGKDRWICRQCWLELSSFHDFYIKVEKEHQLNKISLVKNDDKDEVANIDIKLEEQSFENASIPADNVTHLNKRKRGRKKKAVVKPECVQIEEVPIVQVKYENETNDSTEAPHTELDVDVLINEDISSIDDWENCFLRENEEDSDEEYTYNKEISDELSLLKISRRKVKTKPKAVTKYRTKYTKTKKEKQIKVIKKSTSSNALNAMRKNDQFITDNQFQLSCCICNISLDNFNCLKIHFRKEHHILGYAMCCNKKFYKRGVLVDHLNVHKDPDYFRCLQCNKALSTRRSYEKHMETHQLYETRHTVYNCEQCDKSFLKKPVYDRHVLIHVPEEERTFQCNLCDKKFASEYLRKQHCTLTHSKKYAKICDICGKLLRDSFSFLRHMAEHKGETIAKVECEICGAQLTNKYRLNRHKKMMHTEENQQAQICPYCSKISPNVNAHRHHVKYTHTLERKHACNMCDKKFRRPLELKEHLSTHTGEPLYTCPHCPRTFISSANMHKHRRLTHRKEWEEGKLKKEAKALAGKKFLNALNATQNEYAGLEILDPGNESVPNLAALEF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01399923;
- 90% Identity
- iTF_01074890;
- 80% Identity
- -