Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465277.1:148461005-148463512[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0056 0.72 11.9 3.2 1 23 393 416 393 416 0.97

2 8 2.5e-05 0.0032 19.3 1.2 2 23 425 447 424 447 0.94

3 8 0.036 4.6 9.4 3.2 1 23 453 475 453 475 0.94

4 8 1.1e-07 1.4e-05 26.8 0.2 1 23 481 503 481 503 0.98

5 8 0.0095 1.2 11.2 1.5 3 23 511 531 510 531 0.98

6 8 0.00073 0.094 14.7 3.4 2 23 537 559 536 559 0.94

7 8 0.078 10 8.4 2.3 1 23 565 587 565 587 0.99

8 8 0.0014 0.17 13.9 0.7 2 20 594 612 593 614 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0056	0.72	11.9	3.2	1	23	393	416	393	416	0.97
2	8	2.5e-05	0.0032	19.3	1.2	2	23	425	447	424	447	0.94
3	8	0.036	4.6	9.4	3.2	1	23	453	475	453	475	0.94
4	8	1.1e-07	1.4e-05	26.8	0.2	1	23	481	503	481	503	0.98
5	8	0.0095	1.2	11.2	1.5	3	23	511	531	510	531	0.98
6	8	0.00073	0.094	14.7	3.4	2	23	537	559	536	559	0.94
7	8	0.078	10	8.4	2.3	1	23	565	587	565	587	0.99
8	8	0.0014	0.17	13.9	0.7	2	20	594	612	593	614	0.94

Sequence Information

Coding Sequence: aTGCTGCCTGTTGCTCGAGCCAATCTAGACCATATATGCTGCATATGTTTCTTGGATCTAAAGTCATTAAAACCTACTCAAAAAGTGTACGACGTTAAAAACGAAAATAACATGTCCAAGATACTGAAACTTACATCGCACATAACGATTTTAAAAAACccaataaaccaaaaatatattgatgactATTGTCGGAAAGTATGTGAGACATGTTTCGTCAAGATACAGTATTCTTATACTTTTCGGGAAAAAATTATAGCGTCTACCACAACGCTTAAGGAGCTTCTGGAAAGTGATGAACTAAATGAACAGGATATTGAAAGATTGAGTAATTTTTGCCGTATTTGCTTAAACCGACAAAAGGATattaaaaacactaaatgtctaaGCATGAATCATTTATATTGGTTGAAAGACTGCAGTGGTATAAGGTTCACTTCATTGGTTGACAGAGAAACATTTCGAATAAAAGAGGGAACCAATATTAATGAAATATCAGTAATAAACGATACCCACTTTCCTAAGCAATTGTGTTTGAGTTGTTTTAAGAAACTGCAAAATGTGGAAGAGTTTAGACAATCGGTAACACAATCATTTGAGTACATGATCTCTATTATGAATGATGAGATTGGACCAGAAGACTGTTTAGTAGAACAATGCGTTaagcatttaaaagaaaatattatccTGCAAAAGGAGGAACCAGCGGAAACAATGTTTATTGACTGTGGGAATTTCGAAATGGATAATACTAATCTTAAACTAGAAAATGGAAGTTCAAGCAAAGAAATAAAAGGCGCTTTTAATGATATGGAAACAATCCTAGATACAACAGAATATTCAAACTTGCAACACTTGGAGTATGAGACTTTTAAAGATGAATTGGACTTTGAGGATGATAAAGGCTATTCAGATAGCAATCACGAAGACaatgctttaaatttaaataataatgagCTAACCAGTTGCAGCGACAATGAGGATAAAAATTACTCTTTAAGAAAAACACGATCTAAAAAATCGTTACAAtgctatgTAGATGAAAAGAATTTAAGgactaaagaagaaaatatgaaaaCTGAAAACACAATTAATCCGAAATTGAAAACCTCTAAAAGTAGCAAACAATTAGATGAAAGGAAAGCAAAACAACGCAAAGAAGATAATGCGACGACGTTTGTCTGTGAAGAAtgttcgaaaatattttcaacaagAAATGCATACAGATGCCACAAACGAACAGTACACAATTTTGATTCATCCCAAATGCTCGAGTGCCTAATATGTTCGAAACAATTTAAACGTCAAAGTCATTTAAGTGATCATATTAAAGCAGTGCACGAAAAACAAAAGCCATATAAATGTTCCCATTGTGCAAAGACGTTTTCTGCTAAAAATACTAGGAGAGTGCATGAACTTCAGCACACTGGGGAATATCCGTTCGTTTGTAATTGGTGCGGAAAAATGTTTCGACGACCCTATCAGTTAAAAATTCATATAGAAATACATACTTCTAATCCCGAATTGCTATGTACTATTTGCAAAAGAAGTCAAAAATCTCAAACTGATTTAGAAAATCACCTTAAAAGCCACAGTGATAAACGTTTGCAGTGTCCTCTGTGTGGAAAATTATTCACGAGAGGCCATCATCTGAAAGATCATCATAATGCAGTGCATTTAAAATTGCGCCCttttaaatgtcaattttgTCAATCAGCTTTTGGCGATCGAAAAACTCGGCGTATTCATGAAAGAACCCACACGGAGGATCGTCCAATAAAATGTAGCCTTTGTAGTAGTGGTTTCACTACGAAGTCTGCTTTAACTAAACACATTCATCAATTTTGTCGGAATATAGAGAATAATGAAAGTAATTAA
Protein Sequence: MLPVARANLDHICCICFLDLKSLKPTQKVYDVKNENNMSKILKLTSHITILKNPINQKYIDDYCRKVCETCFVKIQYSYTFREKIIASTTTLKELLESDELNEQDIERLSNFCRICLNRQKDIKNTKCLSMNHLYWLKDCSGIRFTSLVDRETFRIKEGTNINEISVINDTHFPKQLCLSCFKKLQNVEEFRQSVTQSFEYMISIMNDEIGPEDCLVEQCVKHLKENIILQKEEPAETMFIDCGNFEMDNTNLKLENGSSSKEIKGAFNDMETILDTTEYSNLQHLEYETFKDELDFEDDKGYSDSNHEDNALNLNNNELTSCSDNEDKNYSLRKTRSKKSLQCYVDEKNLRTKEENMKTENTINPKLKTSKSSKQLDERKAKQRKEDNATTFVCEECSKIFSTRNAYRCHKRTVHNFDSSQMLECLICSKQFKRQSHLSDHIKAVHEKQKPYKCSHCAKTFSAKNTRRVHELQHTGEYPFVCNWCGKMFRRPYQLKIHIEIHTSNPELLCTICKRSQKSQTDLENHLKSHSDKRLQCPLCGKLFTRGHHLKDHHNAVHLKLRPFKCQFCQSAFGDRKTRRIHERTHTEDRPIKCSLCSSGFTTKSALTKHIHQFCRNIENNESN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01397914;
90% Identity: iTF_01399857; iTF_01074845; iTF_01397914;
80% Identity: -