Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465277.1:148805073-148823747[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 2.1 2.7e+02 3.9 1.4 2 23 280 302 279 302 0.95

2 16 0.015 1.9 10.6 2.6 2 23 333 354 333 354 0.95

3 16 0.0048 0.62 12.1 3.4 1 23 431 454 431 454 0.98

4 16 0.14 18 7.6 2.2 1 23 461 483 461 483 0.97

5 16 0.34 43 6.4 0.2 2 20 552 570 551 573 0.94

6 16 0.041 5.3 9.2 0.9 1 23 646 669 646 669 0.91

7 16 0.0085 1.1 11.4 0.6 1 22 676 697 676 697 0.96

8 16 0.0018 0.23 13.5 3.1 3 23 766 786 764 786 0.94

9 16 0.0016 0.2 13.7 0.1 2 20 813 831 812 833 0.94

10 16 0.00024 0.031 16.2 6.0 1 23 884 907 884 907 0.98

11 16 0.0052 0.67 12.0 1.1 1 23 944 967 944 967 0.97

12 16 0.0023 0.3 13.2 1.4 1 23 1041 1063 1041 1063 0.98

13 16 7.8e-05 0.01 17.8 3.5 1 23 1069 1091 1069 1091 0.98

14 16 6.6e-05 0.0084 18.0 0.7 1 23 1099 1121 1099 1121 0.99

15 16 1.4e-06 0.00017 23.3 1.1 1 23 1127 1149 1127 1149 0.98

16 16 0.012 1.6 10.9 2.4 1 23 1155 1177 1155 1177 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	2.1	2.7e+02	3.9	1.4	2	23	280	302	279	302	0.95
2	16	0.015	1.9	10.6	2.6	2	23	333	354	333	354	0.95
3	16	0.0048	0.62	12.1	3.4	1	23	431	454	431	454	0.98
4	16	0.14	18	7.6	2.2	1	23	461	483	461	483	0.97
5	16	0.34	43	6.4	0.2	2	20	552	570	551	573	0.94
6	16	0.041	5.3	9.2	0.9	1	23	646	669	646	669	0.91
7	16	0.0085	1.1	11.4	0.6	1	22	676	697	676	697	0.96
8	16	0.0018	0.23	13.5	3.1	3	23	766	786	764	786	0.94
9	16	0.0016	0.2	13.7	0.1	2	20	813	831	812	833	0.94
10	16	0.00024	0.031	16.2	6.0	1	23	884	907	884	907	0.98
11	16	0.0052	0.67	12.0	1.1	1	23	944	967	944	967	0.97
12	16	0.0023	0.3	13.2	1.4	1	23	1041	1063	1041	1063	0.98
13	16	7.8e-05	0.01	17.8	3.5	1	23	1069	1091	1069	1091	0.98
14	16	6.6e-05	0.0084	18.0	0.7	1	23	1099	1121	1099	1121	0.99
15	16	1.4e-06	0.00017	23.3	1.1	1	23	1127	1149	1127	1149	0.98
16	16	0.012	1.6	10.9	2.4	1	23	1155	1177	1155	1177	0.97

Sequence Information

Coding Sequence: ATGTGGAATGAATGTTTTATTAATGGAGTGAAGTATAAATGCCGAACTTGCTTTGATCCTGGGCCAACAGTATATCCTATTGCAGAGGAGTGCAGGAACTCCCAAACTTGGGGAGATTTTTTGACCGATATTGTTAAGTTAAATACAAACAATGATGAGTTACTTCCAAAGACCATTTGTTCGAAATGTTTAGAGAAACTTATCAGTTACTATGATTTTATACTTCATGTACATAATGTGAATGAAAAGTTCCACCAACTTTTGGCAAGTGCCAAACATTATTCCCAAAATGATGGTCTTGCCAACAGCTCGAAGAATATAACGCAATGTTTGCCAGAATCTGCCACTGCCTTGCCGTTGGATCAATGTGTTTCGGAAATTAAGTTAGAAGACGAACACGTTATGTCTTACGATGTTGTTTTAAATAACAACTATGATGGAAGAaccgaattaaaaaaagaagGGCTACAGCAGCACCCAGAGGCATCACTTGTGGACTTGGACTATGCCGATGATATCTGCTTACTTCATCACCGATTCGAGGATATAGAGGTCAAATTTAAAGCCCTAGAAAGTGAAGCATTAAAATGCGGCATGAAGATCAATACTGCAAAAACAAAAGTAATGCAAATCAACACCGCCAATACTCAGCAATTCCTCCTAAATAACCATCAGCTGAAAAACGTTGTCACTTTCTGCTACTTGGGCAGTATAATATCGACAACCAGTGGTTCAAAAGCAGATGTGTCGAACCTCATAAATAAGGCCAGGCCTGGCCTTCGgCTGGAATCTTGTCGTAGGCACATAATTCTTGTACACTGCCAAGACAAATCGTTATCATGCGGATTTTGCGGCATAAATTTGAGATGTAAACCAAACTTATTTTCACATCTCAAACGTATACATCCAGACGAGTCACTTGAATCCAATAAAAAGCAATTAGGTCGTTTATTTGGAGAACGTCTGTATAGCAAACCTCTTGTATTACCGCGAGCGGAATGTAAACTATGTGGTTCTACTTTTATGACTAAAAAACAACTTCTTCAGCACTTGGATCATCACAGTGAGGCCAGAACTCTTGATAGCTTAAAATTAAGCAGCGATATTACTCAACGTTGGTTTTCAAATATAAGCGATTTGCAGgacataaaaacaacaatatgcAAAGACATTCGAGAGAAAAATTTGTTCAAATattatgcaattttaaatgaattttcctATGAAATATCCATTAGTGATACGGATGCAGAAGATTTGGAAGAGGAAACAAAAGCACCTGCCAACAAATATAAATGCGAATTgtgtggaaaaaattttttgtacaaatatCATGTCTTTGGTCATATGAGAAAGGATCATATGAGCGAAATAATTCCGTTCAAATGTAGCCGTTGTAAAATGGAATTTATATCTACAAAAATGTATGAACAACATAAACAAGCTCACTGCCGAAATGAACATAAACTACTGAGTTGTTCTAATTGTCCTGGCAAGTTTGTCTGGcacaaaaatatgaaaaaacacaATTGTGCTACgaaaatattaagttttgaaAAATCTGAAAGTTACGAGTacaaaatattaagttttgaaAAATCTGAAAGTTACAATGAAGTAATTCCTTCACTGCCAAAAACTACGAATGTCATAAGATGTGGTCTTTGTGAAATTACCTTAAAAAAACTGCGCGATTTACGACAACACATGCCTTTGCATGCCGATGGCAAAACTGGAGTTGACTTTAATGGTTGCATTTATGTAAATcaatttgaaaatgtatcaagCAATCGTGAATTGTTGGAACAGAAGATTAAAAATGCCTTCACGAAACGTCAAATAAGTCAACTGTATCAAGCCATCGATAAGTATGGTAAAGAGATGGACATTTCAGATTCTGATAGCGATGAAGATGATGCTGATGGTGAAAAAAGCTATTTGTGCGAACTTTGCTATGCAACGTTTAAAAAGCGAAAACTGCTGTTAAATCATCAAGAAGATCAACACAAAGATGTTTCAATGCCTTTCACTTGCAAGGAATGTAGGATGCAGTATGTTAGTACTGATTTGTTGCGACAACATATAAAGAGGGAATGTTGGAATGATCATCGACGAGTGGCTGAACAATGCGATTGTTGTAAAGAGCGTTTTATATGGCCGGAAAACATGTTGAGACATAAAGAAATACAGcgatacataaatattaaaaattcggTGTCGGAGAACTTACGTCGTACCGAGGTAGAAAAACTAATTTCTTCATCAGACTCAAGTGATAATATCGAGATTCGTTGTTGTTTCCTATGTCCTAAAACTTTTTCTAATACTGATAATTTTAATGACCATTTGGATAGTCATGGGTTCACACCATCCACCATCAAAACTGTTGCAAGCACAATACATTCTACATGGTGGCCAAATGGCAGAAAGactataaaatgtaaaatatgcgGCCAAGAATTTTCAAGTATGGCCGAATTAAATGAACACTACTctttaaaaaatctcaaaaacgtTTGTGGCGCCATGCAACATTCTTTGGATAATTACTCGATTACTAATCAAATGGGGTTTGAATTACATTTAGAGCTGGACTCAGAAACAGAAACTGAATGCATTGAAAATGAAGAAAATAGAGAGATGTTGGCGTATAGATGTTGCATATGCAGTAAATCATTTAAGCGAAAATATCAAATATCTCAACATCAAAGATCCATGCACAATTATGAGTTGTTGCAACTTAAATGTGAACGTTGTTTTTTTAGAACTGTATCACAGAAAGTTTTAGATTGTCATAAAGTAAGCCAGTGTTTTAATGTTGAGAAAATGTACAAATGCGATCAGTgtaatttcaaatttatgtggCAAGAGAACCTCGAGAAGCATATTTCGATATTTCATACTTCAAAAGATTTCGTCAAAGCATTGGATGCGGATAGCGCAACGATTTTAAATGAAGGAAGCAATATTAATGATCAAtgtcttgaattatatcaaaaCGATTCAGATGCAAGGGATTGCATTCAATCTAAAGATGTATGTAAATGTCTTAtttgtggaaattttattaCCAAAGAGAGTTGTTCGGAACATTTAAGGAAACACAAATATGATAAATCTTACAATTGCGATTTTTGCGAAATGTCCTTTTTAACAAATGGCTCCTTAAATAGACATAAGCGCATGCATGCAGAACATCATCCTTTCAAATGCACGCTCTGCGAGAAACACTTCAGGCGGCAAGAAGATCTTCGTCTTCATAAACTTGTACACACCGGCAGAACCCATACGGGGTTCAAGTGCGATCTGTGTGATAAAAGCTTTAAGGTGGAATATAATGCAATAATACATCGACGCTCACACTTTAATGAACGTCCTTTTAAATGTACACTTTGCGAGAAATCCTTTGCCAATCCAAGCAGATTAAGAGATCACATGCGCAACCATACTGGCGAACGTCCATATCAGTGCACAATTTGCCGACAAAAATTTATGACTTCGTTCGTTTTGAAGAAACACTCAGTTACGCATGTCAAAAATACTTCacatatattaaaacaaaattaa
Protein Sequence: MWNECFINGVKYKCRTCFDPGPTVYPIAEECRNSQTWGDFLTDIVKLNTNNDELLPKTICSKCLEKLISYYDFILHVHNVNEKFHQLLASAKHYSQNDGLANSSKNITQCLPESATALPLDQCVSEIKLEDEHVMSYDVVLNNNYDGRTELKKEGLQQHPEASLVDLDYADDICLLHHRFEDIEVKFKALESEALKCGMKINTAKTKVMQINTANTQQFLLNNHQLKNVVTFCYLGSIISTTSGSKADVSNLINKARPGLRLESCRRHIILVHCQDKSLSCGFCGINLRCKPNLFSHLKRIHPDESLESNKKQLGRLFGERLYSKPLVLPRAECKLCGSTFMTKKQLLQHLDHHSEARTLDSLKLSSDITQRWFSNISDLQDIKTTICKDIREKNLFKYYAILNEFSYEISISDTDAEDLEEETKAPANKYKCELCGKNFLYKYHVFGHMRKDHMSEIIPFKCSRCKMEFISTKMYEQHKQAHCRNEHKLLSCSNCPGKFVWHKNMKKHNCATKILSFEKSESYEYKILSFEKSESYNEVIPSLPKTTNVIRCGLCEITLKKLRDLRQHMPLHADGKTGVDFNGCIYVNQFENVSSNRELLEQKIKNAFTKRQISQLYQAIDKYGKEMDISDSDSDEDDADGEKSYLCELCYATFKKRKLLLNHQEDQHKDVSMPFTCKECRMQYVSTDLLRQHIKRECWNDHRRVAEQCDCCKERFIWPENMLRHKEIQRYINIKNSVSENLRRTEVEKLISSSDSSDNIEIRCCFLCPKTFSNTDNFNDHLDSHGFTPSTIKTVASTIHSTWWPNGRKTIKCKICGQEFSSMAELNEHYSLKNLKNVCGAMQHSLDNYSITNQMGFELHLELDSETETECIENEENREMLAYRCCICSKSFKRKYQISQHQRSMHNYELLQLKCERCFFRTVSQKVLDCHKVSQCFNVEKMYKCDQCNFKFMWQENLEKHISIFHTSKDFVKALDADSATILNEGSNINDQCLELYQNDSDARDCIQSKDVCKCLICGNFITKESCSEHLRKHKYDKSYNCDFCEMSFLTNGSLNRHKRMHAEHHPFKCTLCEKHFRRQEDLRLHKLVHTGRTHTGFKCDLCDKSFKVEYNAIIHRRSHFNERPFKCTLCEKSFANPSRLRDHMRNHTGERPYQCTICRQKFMTSFVLKKHSVTHVKNTSHILKQN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -