Tgro023239.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tachina grossa
Gene Symbol
-
Assembly
GCA_949987645.1
Location
OX465275.1:163791811-163816008[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.0037 0.48 12.5 4.1 2 23 87 109 87 109 0.96
2 13 0.0042 0.54 12.3 0.1 2 23 115 136 114 136 0.97
3 13 0.19 24 7.1 0.1 2 23 819 841 818 841 0.95
4 13 0.00023 0.03 16.3 0.4 1 21 918 938 918 939 0.95
5 13 0.21 27 7.0 4.4 3 23 949 969 947 969 0.96
6 13 7.8e-05 0.01 17.8 7.2 1 23 975 997 975 997 0.98
7 13 0.0015 0.19 13.7 2.8 1 23 1003 1025 1003 1025 0.97
8 13 0.098 13 8.0 2.5 1 20 1031 1050 1031 1052 0.93
9 13 0.00023 0.03 16.3 0.4 1 21 1178 1198 1178 1199 0.95
10 13 0.21 27 7.0 4.4 3 23 1209 1229 1207 1229 0.96
11 13 7.8e-05 0.01 17.8 7.2 1 23 1235 1257 1235 1257 0.98
12 13 0.0015 0.19 13.7 2.8 1 23 1263 1285 1263 1285 0.97
13 13 0.098 13 8.0 2.5 1 20 1291 1310 1291 1312 0.93

Sequence Information

Coding Sequence
ATGTTGTCTGCGATAAAAATCAAGGAAGAGCCTCTCGATGAAATTGAAGATTCGAAGGAAACATTTAAACAAGTAGAAGCTTTTATAAAGCAACAAACTAATGCTGAAGTTGGGGAGCAGCAATCAGTGCCATCTAATTTTCGCATCGTGGAGGAACAAGACAGCATAATTACCGTTAGTGCCGCCGACATGAGGTCTGATGATGAAATGCGTTTTATCGATTCCATAAACAACTGTGATCCAAACAAATTCAAGGGTGTGTGTTCGAAATGTCTGAAGTTTTTCACAAATCGTTCTCAATTTTTAAAGCACACTAAACGCAATCATTGTGTAACGAAACAGAAGTGTCCCGTATGCCCGGTTACATTCATTGATGCCACCTCTATgttaaatcatttaaatttacatcgggaaaactttttcttttgttcCCTTCACTGCGGCGCAAATTTCGCTACATTACCTTTGTGTGAAGACCATGAGTTAAAGGAACATAAAATTcaagCCACACCAAAAATTCggtataaacatttttgttcattttgCCGTGAAGGTTTTAAAACCGAACTCCAAATGCATGTTCACTGGCTGCAGCAAACCCAGGGCTGCGGAAAATTAATGCAAGATATTGTACTACATTCCACTAATGTTGCAAACAATTATGATGACCACATCAATAAGtcgaaaaatctttttttagacAAACAATTAAAATCACCCACAACAAATTCCGTGTCAACCATACCCATCACTAAACTTAGATTGAAATATGATACGACTCCAACAAATGGAAcaaataaaagacaaaataACAATGACTATGAAGATACATCCAAAAAACGTTTGAAAacgtttgagaaaataaaatacgaaattgAATCTAATCAACTGCCTTTAAATATTCAGTcagatattaaaataaaagaagaacCTGCAGATGATTATGAAAGTACCATAACTTCACCTTTAATACCTGAAGTCATCATAAAGACAGAGGAAGAAGATAAAACAGAGGAAAAAGAAAAGAATTGCGAGAAACGCTCCATGACAAACTTAATAATAAACAATATGATTGGCCCAGAATCAAACGGTAAATTTATACCAATTGAAGAGCTTGTGACTTcggaaaatatgaaaattgaGCCTCATTCTCAAATGAAAACCTTTTCTATCAATACTTTGGTTAATTCAAATACAAATGGTAAAATAATTAATCTGAACAACAGCCAGAACTCTCCTGTCTTACAAACATTTAGCAATAACATGAGCAACATAAATGGTAAAATAGTTAATATGAACAACAGCCAGAACTCTCCTGTCTTACAAACAGTTAACAATATCATGAGCAACATAAAtggtaaaataattaatatgaaCAACAGCCAGAACTCTCCTGTCTTACAAACAATTAACAGTAACATGAGCAACATAAAtggtaaaataattaatatgaaCAATAGCCAGGGCTCTCCTGTCTTACAAACAATTAACAATAACATGAGCAACATAAAtggtaaaataattaatatgaaCAACAGCCAGGGCTCTCCTGTCTTACAAACAATTAACAATAACACGGGCAACATAAATGGTAATAGTTCcataaacaaaacaataaagATTAATGAAGGCAACTTGCGATTAATTAAGATAGCACCAGCGCCTTTGCCTGTAACAAATAAATCTTTTGGTAATTTGAACttcacaaatattaaaaaatgtaacaCAACTACTATAATGCCTTTTAAATTGGCCAACAGCGATATTAAGCCCCTGCCGAGAAGTGGTttacaaattataaaatttttgccaAACACTCAATTCATAAGCATGAAAgttaacaataacaacaataatttaTTAGGCAATAAACAGCCTTTggtgctaaaattaaaaaataccaCAGTAGAAACTTGTAACAACAATAACGCATTAGGAGGCAAACCTCCTGTAGTCTTAAAATTACACTCTTCACAAACTGCAGCTGCCCAAACAACAAGCTTAGTTTCGACCTCAACACTCCCTATCATATCAAACTCAACACCTAAAACAGTAGCATGCAATACATCAAGTGCTAACAGCAATGCAGTTTCCATTAAATTGAATTCCCTTGAACAGAACACCACCATTGATGCAGAAGACTTTAAGAAACTCCAAGCTGAGGCCCTTATTAAGGCTGAAGAACATCgcaaaaacttttatatatccAAAACGCGTTTAATGATGATCGAAAATATTCCAGAGAAAAAACAATTGATTGATAATATGAAACAACAAATAGCTGAGGTTGAAACTAAAACAACTGAACAGATCCAAAGCAAACCCGGgggaaatttcattttaaataccAAACAGACTGATGAACCGGTTTCATTGTATTTGCCCATATTAACCACTATGGATGTAACGCTGGTACAGGCTCGCTATAAGAATCCTAATTACAATTATAAATGGATTTGCCCATACTGTTTAAAGGATTATGAAATTAAAACTGCTCTCAAAATGCACTTGATCAAGGCGCATAATTTAAATTCTCGTGATATGGAAAAGATTAATGTACAGGCGAAGCCCTATTTAATTGATGTTATAGACGAAGTCGTTGAAGATATAAAACCCGAAATTAAGGAGGAACCACTTTCGCAGGATTCTCAGGATTCTCAGTCATTGGAAACATATAAAATTGTGGATACGATATCACCCTCGTCACCAAAACTTCTTAAACTAACAAACATAAAACAGCAAAGAGCACGTTATGTTTGTGATAAATGCGGTCGTACGTGCTCTTCCAAAACAATGCTTAACGATCATATCTTGGCCAATTGCAGTCGTGAGCCACAGTATGGATGCACAGAATGtgataagaaatttttttctcacGGAACTCTACAATGTCACATGACCATACATACGGGTGAATTGCCTCACAAATGCAATTATTGCGATAAACGTTTTCGTACCAGGGGACAAGTAAAGGTACACCATCGAACACATACAGGAGAGAGGCCATTCTTCTGTCAGGTCTGCAGTCAACGCTTTACGCACCGTGAAACTTTGATAGCCCATTTGTCACGTCACATAGGCATGAAACGTTACAAATGTTATGGTTGTGATAAACATTTTTCCTGCATAAGTGCTTTAAAAACACATCGCGAGATACGTGCTGACACCTGTGGCCGAGTTAAGTTTAATCCTCGTGCCATTGGCCCTCGTGTTCGTGTCATACGTGGCAATGTTATATTTGAACCTCAGCCAGAAATTAATCCCTACCTAAAGTCTGAGGATCCCAAAATTGTATTGTCTGAGTTACAAAATCACTCGGAGGATtcgaaaattgaattgaaaaacCAATTCCAGGATAGCAAAATTATAGACGAAGTCGTTGAAGATATAAAACCCGAAATTAAGGAGGAACCACTTTCGCAGGATTCTCAGGATTCTCAGTCATTGGAAACATATAAAATTGTGGATACGATATCACCCTCGTCACCAAAACTTCTTAAACTAACAAACATAAAACAGCAAAGAGCACGTTATGTTTGTGATAAATGCGGTCGTACGTGCTCTTCCAAAACAATGCTTAACGATCATATCTTGGCCAATTGCAGTCGTGAGCCACAGTATGGATGCACAGAATGtgataagaaatttttttctcacGGAACTCTACAATGTCACATGACCATACATACGGGTGAATTGCCTCACAAATGCAATTATTGCGATAAACGTTTTCGTACCAGGGGACAAGTAAAGGTACACCATCGAACACATACAGGAGAGAGGCCATTCTTCTGTCAGGTCTGCAGTCAACGCTTTACGCACCGTGAAACTTTGATAGCCCATTTGTCACGTCACATAGGCATGAAACGTTACAAATGTTATGGTTGTGATAAACATTTTTCCTGCATAAGTGCTTTAAAAACACATCGCGAGATACGTGCTGACACCTGTGGCCGAGTTAAGTTTAATCCTCGTGCCATTGGCCCTCGTGTTCGTGTCATACGTGGCAATGTTATATTTGAACCTCAGCCAGAAATTAATCCCTACCTAAAGTCTGAGGATCCCAAAATTGTATTGTCTGAGTTACAAAATCACTCGGAGGATtcgaaaattgaattgaaaaacCAATTCCAGGATAGCAAAAaagaaGCGAATACCTATCCTTATCCTGCGAAGTATAAAGGAGCGTCTAAGGGTCACGAATCGAAAAAAACCCATGCTTCCTCTAAGGGGAAGGAAAAACATAAAGAGTCAACCAGACATCCCCCACATGTTGTTAGCTCCACTAAAAAACCAGGAgataataaatcaaacaaacaTTTGGACAATGCTTCATCCAATGCAAAAAAGGAACGTAATAGTTCAAACAAGCCTCTAATGAGCCAACATGAAGCTAATACTGCTGGAGGAGATAATAGATTAAACAAACATTTGGACAATGACCCTTCCCATTTGAAAAGGTTAGATGATGGATCCACCAAGCTTTTAACGAGCGAACGGGAAGCTGCAGACACTACAAAACCAGGAGATAGTAGATCAAACAAACATTTGAACAATGACCTTTCCCATTCGAAAAGGTTAGATGATGGATCCACCAAGCTTTTAAAGGGCGAACGGGAAGCTAACGGTGCTGCAGGAGATAATAGATCAAATAAAAATTCCGACCATAACCCTTCCATTGCGAAAAATGAAGATAACGGACCAAACAAGCCTATAATTAGCCAGTATGAATCTAATGCTGCTGCAGGAGATGATATATCAAATAAACATTCCGACCATAAGCCTTCCATTGCGAAAAATGAAGATAACGGACCAAACAAGCCTATAACTAGCCAGTATGAATCTAATGCTGCTGCAGGAGATAATGGACCAAATAAACATTCCGACCATAACCCTTCTATTTCGAAAAATGAGGATAACGGATCAAACAAGCCTATAACTGGCCAGTATGAATCTAATACTGCTGCAGGAGATAATAAATCAAATCAGCATTCAGACAATACACCTTCTATTGCGAAAAAGGAAGATAATGGACTCATCAAGGCTTTTATCAACCAACAGGAAGCTAATTTTGCTGCAGAACCAGAAGATACTAAATCAAACAAACAATTAGACAATAACCCTACTATTGCAAAAAATGAAGAGGATGGAGCAACAAACCCTGTGATCAGTCAACCAGAAACTAGTTATGCTGCAGATAACGAACGTTCCGAACCACAAAATGATGGTTTGTCAATTGTTGAAAAACATCCAAATCTCAATTTGCTTCATACTAGTTTAATGGAGTTAGCTTCTACCGGAATAACCCATGGATTAACTGAGGTAATAAATCATCAGCTTAATAAACAGCCTGCACAGTATGATGAACAACCTCCAGAGTATGATGAACAGCCTTCAGAGTATGATGAACAACCGCCAGAAAATGATGAACAACCTCCAGAGTATGATGAACAACCTCCAGAGTATGATGAACAGCCTTCACAAAATATCAAACAGCCTTCACAGAAACGCAAACAACCTCCAGAGTATGATGAACAACCTCCAGAGTTTGATGAACAGTCTTCACGGAATGGCAAAGATCCTTCACATAATAGCAAACAACCTCCAGAGTATGATGAAAAACTTTCAGAACATGATGAAAAACCTCCAGAGTATGATGGCCACCCCTCAAAGAATGGCAATCAACCTTCACAGAATAGTAAAAAACCTTCCGAAGATGGTGTACAGCCTTCTGAGAGTGATGAACAACCTCCAGAGTATAATGAAAAGCCTTCAGAGAATGATGAACAACCTTCACAGGATGCTAATTAG
Protein Sequence
MLSAIKIKEEPLDEIEDSKETFKQVEAFIKQQTNAEVGEQQSVPSNFRIVEEQDSIITVSAADMRSDDEMRFIDSINNCDPNKFKGVCSKCLKFFTNRSQFLKHTKRNHCVTKQKCPVCPVTFIDATSMLNHLNLHRENFFFCSLHCGANFATLPLCEDHELKEHKIQATPKIRYKHFCSFCREGFKTELQMHVHWLQQTQGCGKLMQDIVLHSTNVANNYDDHINKSKNLFLDKQLKSPTTNSVSTIPITKLRLKYDTTPTNGTNKRQNNNDYEDTSKKRLKTFEKIKYEIESNQLPLNIQSDIKIKEEPADDYESTITSPLIPEVIIKTEEEDKTEEKEKNCEKRSMTNLIINNMIGPESNGKFIPIEELVTSENMKIEPHSQMKTFSINTLVNSNTNGKIINLNNSQNSPVLQTFSNNMSNINGKIVNMNNSQNSPVLQTVNNIMSNINGKIINMNNSQNSPVLQTINSNMSNINGKIINMNNSQGSPVLQTINNNMSNINGKIINMNNSQGSPVLQTINNNTGNINGNSSINKTIKINEGNLRLIKIAPAPLPVTNKSFGNLNFTNIKKCNTTTIMPFKLANSDIKPLPRSGLQIIKFLPNTQFISMKVNNNNNNLLGNKQPLVLKLKNTTVETCNNNNALGGKPPVVLKLHSSQTAAAQTTSLVSTSTLPIISNSTPKTVACNTSSANSNAVSIKLNSLEQNTTIDAEDFKKLQAEALIKAEEHRKNFYISKTRLMMIENIPEKKQLIDNMKQQIAEVETKTTEQIQSKPGGNFILNTKQTDEPVSLYLPILTTMDVTLVQARYKNPNYNYKWICPYCLKDYEIKTALKMHLIKAHNLNSRDMEKINVQAKPYLIDVIDEVVEDIKPEIKEEPLSQDSQDSQSLETYKIVDTISPSSPKLLKLTNIKQQRARYVCDKCGRTCSSKTMLNDHILANCSREPQYGCTECDKKFFSHGTLQCHMTIHTGELPHKCNYCDKRFRTRGQVKVHHRTHTGERPFFCQVCSQRFTHRETLIAHLSRHIGMKRYKCYGCDKHFSCISALKTHREIRADTCGRVKFNPRAIGPRVRVIRGNVIFEPQPEINPYLKSEDPKIVLSELQNHSEDSKIELKNQFQDSKIIDEVVEDIKPEIKEEPLSQDSQDSQSLETYKIVDTISPSSPKLLKLTNIKQQRARYVCDKCGRTCSSKTMLNDHILANCSREPQYGCTECDKKFFSHGTLQCHMTIHTGELPHKCNYCDKRFRTRGQVKVHHRTHTGERPFFCQVCSQRFTHRETLIAHLSRHIGMKRYKCYGCDKHFSCISALKTHREIRADTCGRVKFNPRAIGPRVRVIRGNVIFEPQPEINPYLKSEDPKIVLSELQNHSEDSKIELKNQFQDSKKEANTYPYPAKYKGASKGHESKKTHASSKGKEKHKESTRHPPHVVSSTKKPGDNKSNKHLDNASSNAKKERNSSNKPLMSQHEANTAGGDNRLNKHLDNDPSHLKRLDDGSTKLLTSEREAADTTKPGDSRSNKHLNNDLSHSKRLDDGSTKLLKGEREANGAAGDNRSNKNSDHNPSIAKNEDNGPNKPIISQYESNAAAGDDISNKHSDHKPSIAKNEDNGPNKPITSQYESNAAAGDNGPNKHSDHNPSISKNEDNGSNKPITGQYESNTAAGDNKSNQHSDNTPSIAKKEDNGLIKAFINQQEANFAAEPEDTKSNKQLDNNPTIAKNEEDGATNPVISQPETSYAADNERSEPQNDGLSIVEKHPNLNLLHTSLMELASTGITHGLTEVINHQLNKQPAQYDEQPPEYDEQPSEYDEQPPENDEQPPEYDEQPPEYDEQPSQNIKQPSQKRKQPPEYDEQPPEFDEQSSRNGKDPSHNSKQPPEYDEKLSEHDEKPPEYDGHPSKNGNQPSQNSKKPSEDGVQPSESDEQPPEYNEKPSENDEQPSQDAN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-