Basic Information

Insect: Tachina grossa
Gene Symbol: salm
Assembly: GCA_949987645.1
Location: OX465275.1:68256618-68291329[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 8e-06 0.001 20.9 0.9 1 23 563 585 563 585 0.98

2 7 1.6e-05 0.002 20.0 2.1 1 23 591 613 591 613 0.98

3 7 0.027 3.4 9.8 1.5 2 23 977 998 976 998 0.98

4 7 1.1e-07 1.5e-05 26.7 0.5 1 23 1004 1026 1004 1026 0.98

5 7 0.00035 0.045 15.8 2.3 1 23 1036 1058 1036 1058 0.98

6 7 0.058 7.4 8.8 3.1 2 23 1426 1447 1425 1447 0.97

7 7 4.4e-08 5.7e-06 28.0 1.3 1 23 1453 1475 1453 1475 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	8e-06	0.001	20.9	0.9	1	23	563	585	563	585	0.98
2	7	1.6e-05	0.002	20.0	2.1	1	23	591	613	591	613	0.98
3	7	0.027	3.4	9.8	1.5	2	23	977	998	976	998	0.98
4	7	1.1e-07	1.5e-05	26.7	0.5	1	23	1004	1026	1004	1026	0.98
5	7	0.00035	0.045	15.8	2.3	1	23	1036	1058	1036	1058	0.98
6	7	0.058	7.4	8.8	3.1	2	23	1426	1447	1425	1447	0.97
7	7	4.4e-08	5.7e-06	28.0	1.3	1	23	1453	1475	1453	1475	0.99

Sequence Information

Coding Sequence: ATGTCAACTAATAGCGGTAACATAGCGCGTGTAGCTTCGGGTTTTCCCTATAAATCACGTTACGTATCTTctctaatgaaaaatattttaacaactGTTTTGTGTGAAATGAGAAGTGATTTTAAGGAAACACATCAAGAAACCATTAATAAAATGATACAATTTGGTACCGTCAAATATGGAATTGTCAAACAATTAAAAGATCGCGCTAAAAGCACCGATAAAGATTCAGCCAATGATCATGAGGAGAATGGTACATGTTCACCTTTGGCTGCCACAACCGCCAATGAAGATAGTGATTGCGATAGAGCAGAATTAACTCATATGGCCGCAAGTAATGAAcatgttaataaaattaatacaacaCCCGCTGACGCCGCCGATAAAGAACAGACTTGTGCGCCCGGGCCAGTAACAGGAGAAGAAGATCTTAATCATAACAACAACATTGGAATGCCTTTGGAAGAGCAACACCAATCCCtgccacaacaacaacaacagcagcagcagcaacagcagcaggaGCTAAAGATACAATCTCCAACACTAAAAGAAGATTCAAATGCGGCTTTAGCACCCTCCAAAACATATCCAAAAGATGAAGAGTTTCCCTCACCCACTCCACCCGATCTCAACGAGAGTCAAGAACCTTTGAGAAAAGCCCAAGAAACCAGCGAAGAGGCTAGCGAAGCTGAGCCGTCCACACAAGACGatgaaaaagaaaacttaaagACAACCGACAATATGTGTTTGCCTTCAAGTAAATCGGAAACAGACAACAATAAGGATCAGTTAAGCCCACAAGGTAAACaagaagaaaatgaaaaaatggaattGGAGGAAAGTCCAGCATCAGAAAATGCTGAAAAAGCACTCAGTAAAGACTTGGAAACAGATGGCACACAGCCAGAATCTGCAACTCCCTCATTGCCTGCCTCTTTAGCCCAACAATTTGGTGCTGCACCTGTCAATATAGAAGCtattaaaaatatgcaattagCTATTGCCCAAGTGGCTGCCAAAACTATAGCCAATGGTGCATCCGGACAAGATAATGAAGCTGCCGTGAAACAGCTGGCCTTCTTACAACAAACCTTATTCAATCTTCAACAACAGCAACTATTCCAAATTCAACTTATACAACAACTGCAGTCGCAGTTGGCCATGAGTCAAACCAAGTCTAAAGAGGAGGCCAGTGAAATGGATGAAGAGGAAGAAGAAGAGGGCGAGAATGGCGAAGAAGATACTTATGAAGAAGAAGAGCGTATAGCTCAAATGGAATTAAGACAGAAGGCAGAGGCTCGCATGGCCGAAGATAAAGCCCGCCAGCATTTAATCAATGCTGGTGTACCTCTGGATTCTCTCAAAAGAAAACGTGAAGTAGACAGCGCTGAGGAAATGGATGCTTCTGCTTCTCACCGCATAAGTATTGACAAAAGCTCCGATTATACTTTAGATAAACTAAAAGACATGGAAAACAGACCCTTACCTTTTGGCTCAAACTTAGCCTCTTCGATTATAACTCACCATGATGATATGCCCGAACCAAATTCCTTAGACTTGTTGCAAAAGAGAGCTCAAGAAGTGTTGGATTCCGCCTCTCAGGGTATACTGGCCAATAATATGGCTGATGAGTTTGCATTCAAAGAGAAGAATGGCAAAGCTGGCAATGAGCCCTTCTTTAAGCACAGATGTCGCTACTGTGGCAAAGTCTTTGGTTCCGACTCTGCTTTACAGATTCATATCAGATCTCATACAGGCGAAAGACCTTTTAAGTGCAATGTTTGTGGTAGCAGATTTACGACCAAAGGAAATTTGAAAGTCCATTTTCAAAGACATGCCCACAAATTTCCCCATGTACCTATGAATGCCACGCCCATACCGGAACATTTGGACAAATTTCATCCTCCACTATTAGATCAAATGTCACCAGACAGTTCGCCCAGCCATACACCTGCTGCCATGCCACAACAAATGCCAAGTCAAATGCCATCCATGAATTTCCCAGGACCATCTAACAATTTTCCTGGACTAGCGAATCTTTACAGACCTCCCATGGATATTTTACAGTCACTGTCTGCTTCTTCTGGAAGCGGCTTTAGTAATCCTTTCTTTTCCCAGATTCCTGGTAATTTGGGAGAAGCGGCCGTGCAGGCTCAAGCAGCGGCCCAAGcagttttaagtaaaaatcaagaaattgcCACAGACTTGAGCAAAATCTCAGAGCCCAACTCTCCTGCAGACACACAAATAAAGTCAGAGATCTGCGAGGAAAAGAAAGGCGAACAAGAGAAAATAGCAACCAAAACAACCTCTGAAACGGAAGCACCTAAAACGTTATCACCCTTACCTGTGGAAACTAAAATCAAAGAAGAAAAGGATGATTACGAAATTGTGGAGGACAGAATACGCACTCACTTGCCAGTTCTATCCTCAAACAGTCCCATCATTCCTGTGCACTCACCTCTAACGAATTCCCTACCCCAAGTACCTAAAAGCCCGCCTGTAACCACCTCTAAACCACCCACCATTCAACAATTACCGCCGGTAGTACAACCCATACAGCCCATACAACCACCCGCCATTATGCACCAACACCCCTCACCAGGCTCTCACCATCATCTGGATCATCTGCCAACTCCTGGACAGCTGCCACCCTTAATGCATCATCGTGAAGACTTCTTTGCCGAGCGGTTTCCTCTGAACTTTACGAAAACGTTGTCACCTGAAAGACACTCGCCTATAAGATCGCCCGCGCACATACCGCGTGCTCCCTTCTTTAATCCGATGAAACCACATGATATGGCTCTGTTGCCGCGTCCCCACAGCAACGATAATTCTTGGGAGAATTTCATAGAGATTTCTAATTCTTCGGAGACCATGAAGTTGAAGGAATTAATGAAGAATAAGAAAATAACCGATCCCAATCAATGCGTCGTATGCGATCGTGTTTTATCTTGCAAAAGTGCTTTGCAAATGCATTATCGCACTCACACGGGTGAGAGGCCATTCAAATGTCGCATTTGTGGTCGTGCCTTCACCACCAAAGGCAATTTGAAGACTCACATGGCTGTGCACAAAATAAGACCTCCCATGCGTAATTTCCATCAGTGTCCAGTGTGTCATAAAAAATACTCAAACGCTTTAGTGCTGCAACAGCACATACGCCTGCATACCGGAGAGCCCACAGATTTGACTCCCGAACAAATCCAAGCAGCCGAAATACGCGATCCTCCACCATCCATGATGCCCGGAGCATTCATGAATCCCTTTGCCGCAGCGGCTTTTCACTTCGGCATGCCTGGAGGTCCCGGCATGCATCCTTTAAGTGGTCTACACAATGGTTTGGGCTCTGAGTCGTCACAGGGAGACTTTGATGACCAAATGGATTGCGGAGACGATTTCGATGACGACATGTCCTCCGACCATATGTCAAATAGTAATGATTTGGAACCTGGCAGTGAGAGACCAAAATCTACAGACGAATTCAAAGGTTTGTTGTTCGAACAAAAGCTAAGAATAGATCCCATTGGAGTGGTCAATACAAACCCTCGACCTCAATCGGCCACTTCAAACCCGAATTCAGTAAATTCTCCATCCACCAGCCCAACATCAGCCACAAAACCCTTAAGTTCGACTCGAGCCACATCGCCGGCGAAATCGGAAATGTCTCAAGGAGCGCTAGACTTAACGCCTCGTGCAGGACCTTCATCCGCCAATAGCAGCATCAGCGCCAGATCTCCATTACCTATCAACATCACTAAACGGTCACCCTCGCCCATTACCAAATCGCCGAAATTACCGCAAATTAGTCCCTCTACCGCCATGCCACCCACTTCTGCTGTAGATTGTCTGCCACCCAGTTTGCACCATCACTTGCAGCAGCAACATCAACAATTAATGCAACAACAGGCTGCCTTAGCCGCCGCTCAACATCACCAGCAAATGCAGCACAATGCCGTCGTTGCTATGCATCAGGAACAACTGAGACGCGAAGCTGTTGCACATGCGCAACTATCGCCAAATGCTCCACAATCATCTTCACAGCAGCCACCAGCAGGACAGTCGGTCACCTCACCACAAATACCACATCCCCAAGCACCGAATCCACTGGTAGCAGCTGCCAGACCTCCATTTGGCATGTTTCCAAATCTCCCGCTGTTTCCACCGGCTTCAACACAAAACATGTGCACAGCAATGAATTCAATTGCACAGTCTGTTATGCCGGCGGCACCATTTAATCCTTTAGCTCTATCGGGAGTCAGAGGCAGCACTACTTGCGGCATTTGTTTCAAAACATTCCCCTGCCATTCGGCTTTGGAGATTCACTATAGAAGTCACACTAAAGAGAGACCATTTAAGTGTAATATTTGTGATCGCGGTTTTACAACAAAGGGAAATTTGAAACAACATATGCTTACACACAAAATACGTGATATGGAACAGGAAACTTTCCGGAATAGAGCAGTCAAGTATtGTCAGGCTGAAGAGGTATTGTCGAAATATTATTCCTTGAAGGTTGAACTTTTAAAGCAGAAATAA
Protein Sequence: MSTNSGNIARVASGFPYKSRYVSSLMKNILTTVLCEMRSDFKETHQETINKMIQFGTVKYGIVKQLKDRAKSTDKDSANDHEENGTCSPLAATTANEDSDCDRAELTHMAASNEHVNKINTTPADAADKEQTCAPGPVTGEEDLNHNNNIGMPLEEQHQSLPQQQQQQQQQQQQELKIQSPTLKEDSNAALAPSKTYPKDEEFPSPTPPDLNESQEPLRKAQETSEEASEAEPSTQDDEKENLKTTDNMCLPSSKSETDNNKDQLSPQGKQEENEKMELEESPASENAEKALSKDLETDGTQPESATPSLPASLAQQFGAAPVNIEAIKNMQLAIAQVAAKTIANGASGQDNEAAVKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQLAMSQTKSKEEASEMDEEEEEEGENGEEDTYEEEERIAQMELRQKAEARMAEDKARQHLINAGVPLDSLKRKREVDSAEEMDASASHRISIDKSSDYTLDKLKDMENRPLPFGSNLASSIITHHDDMPEPNSLDLLQKRAQEVLDSASQGILANNMADEFAFKEKNGKAGNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNLKVHFQRHAHKFPHVPMNATPIPEHLDKFHPPLLDQMSPDSSPSHTPAAMPQQMPSQMPSMNFPGPSNNFPGLANLYRPPMDILQSLSASSGSGFSNPFFSQIPGNLGEAAVQAQAAAQAVLSKNQEIATDLSKISEPNSPADTQIKSEICEEKKGEQEKIATKTTSETEAPKTLSPLPVETKIKEEKDDYEIVEDRIRTHLPVLSSNSPIIPVHSPLTNSLPQVPKSPPVTTSKPPTIQQLPPVVQPIQPIQPPAIMHQHPSPGSHHHLDHLPTPGQLPPLMHHREDFFAERFPLNFTKTLSPERHSPIRSPAHIPRAPFFNPMKPHDMALLPRPHSNDNSWENFIEISNSSETMKLKELMKNKKITDPNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTKGNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPSMMPGAFMNPFAAAAFHFGMPGGPGMHPLSGLHNGLGSESSQGDFDDQMDCGDDFDDDMSSDHMSNSNDLEPGSERPKSTDEFKGLLFEQKLRIDPIGVVNTNPRPQSATSNPNSVNSPSTSPTSATKPLSSTRATSPAKSEMSQGALDLTPRAGPSSANSSISARSPLPINITKRSPSPITKSPKLPQISPSTAMPPTSAVDCLPPSLHHHLQQQHQQLMQQQAALAAAQHHQQMQHNAVVAMHQEQLRREAVAHAQLSPNAPQSSSQQPPAGQSVTSPQIPHPQAPNPLVAAARPPFGMFPNLPLFPPASTQNMCTAMNSIAQSVMPAAPFNPLALSGVRGSTTCGICFKTFPCHSALEIHYRSHTKERPFKCNICDRGFTTKGNLKQHMLTHKIRDMEQETFRNRAVKYCQAEEVLSKYYSLKVELLKQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00045570;
90% Identity: iTF_01399775;
80% Identity: -