Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465276.1:77949859-77983024[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.00034 0.043 15.8 0.3 3 23 183 204 181 204 0.96

2 9 0.0059 0.76 11.9 4.7 1 21 210 230 210 232 0.95

3 9 0.00014 0.018 17.0 2.7 1 23 238 260 238 260 0.99

4 9 0.00033 0.042 15.8 4.7 1 23 266 288 266 288 0.98

5 9 0.00071 0.091 14.8 2.1 1 23 296 319 296 319 0.97

6 9 0.00037 0.048 15.7 0.5 2 23 326 347 325 347 0.97

7 9 0.00063 0.08 14.9 1.4 1 23 353 375 353 375 0.97

8 9 9e-06 0.0012 20.7 1.1 1 23 381 404 381 404 0.97

9 9 2.6e-06 0.00034 22.4 1.9 1 23 418 440 418 440 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.00034	0.043	15.8	0.3	3	23	183	204	181	204	0.96
2	9	0.0059	0.76	11.9	4.7	1	21	210	230	210	232	0.95
3	9	0.00014	0.018	17.0	2.7	1	23	238	260	238	260	0.99
4	9	0.00033	0.042	15.8	4.7	1	23	266	288	266	288	0.98
5	9	0.00071	0.091	14.8	2.1	1	23	296	319	296	319	0.97
6	9	0.00037	0.048	15.7	0.5	2	23	326	347	325	347	0.97
7	9	0.00063	0.08	14.9	1.4	1	23	353	375	353	375	0.97
8	9	9e-06	0.0012	20.7	1.1	1	23	381	404	381	404	0.97
9	9	2.6e-06	0.00034	22.4	1.9	1	23	418	440	418	440	0.98

Sequence Information

Coding Sequence: ATGACTTCCCCCAAAGACCAGGGTGATTATAAACCTTTAGTAGAGAAGATAGATACCGAACTTGACTATGTTGGTGAGTCTCGCGAGTTAACTTCTAATCCAAATCATGGTCCGGAGAGCGAAACTACTGGTGGAGATGTTAAAACTATATTTATGGATGCTGACGgtaattattattatcaatCTTCTGGAAAAATGGTTAGAGTTGAGGCTTTAGCGAAGGAGCCAGAGACGAAGATGGAAAGGAGGTCCGTCAATAAGCGAAGAGctAGTGCAACTCCCGCATCTGTAAAAAAGCCTAAAGTGGAAGTAAGCAATagtaaaaaatcaaaagatgaAAAAGATGATCTTAAGAACACCGACACAACAATTACCTCAGATATCGGTAATCAAGAAGAAGTGTACGAGTTCGATGAAAATGAACAAAGTCCAGATGACGCTCCAGATGCAGATGATCCCGATTATGAATGTAAAGCCATAATAAAAGATTCACTAAATGCTAAAGCCAAAGAGACAGCATTGTTTACATGGCATAAACCGTTCGGATGTTCGAGCTGTGATATGGCCTTTACTACATCTGGAGAGTTAGTACGGCATGTGCGATATCGTCATACGCACATAAAACCTCACAAGTGTACTGAGTGTGATTACAGCAGTGTGGAGTTGAGCAAATTACGGCGGCATATGAGATGCCACACTGGCGAACGTCCATATCAATGCCCACACTGCACTTATGCGTCACCAGATACTTTTAAACTGAAACGTCATTTGCGTACACACACGGGCGAGAAGCCATATGAATGCGATATTTGTCATTCTCGTTTTACACAATCAAATTCTTTGAAACATCATCGTCTCATACACTCAGTTAATGATAAGCCGGTTTTCCAATGTCAACTATGTCCCACAACTTGCGGACGGAAAACAGATTTACGTCTCCATATAAAGAACTTACACAGTTCGGATCAACCGTTACCGTGTAAACGATGTGGCAAAGAATTACCCGATCGTTATTCATACAAAATGCATATAAAGACACACGAAGGTGAAAAGTGCTATCGTTGCGAATATTGCCCATATTCTTCGATTTCACAGCGTCATCTTGAATCGCATGTCTTTATACATTTAGATGCCAAACCATTTGTTTGTGAAATTTGTCAAAATACATTTCGACAAAAGCAACTTCTTAACcgtcatataaaaatttaccaTTCCGATAATTTTGAGCCACCAAAAGTTCGTACAAAGGATCACAAATGTCCACATTGCGACAAATTGTTTGCATTTAATGGAAATCTTATACGACATATGGAAATTCATGATCCAACATCTAGGCAATTTGAAGAGAAAATTCAGTTAAAAATTGGACGTATGAAACGTGTTAAACCGGATGGCACAGTTGTAATGAAACCGTCTACAGGCGCGTTTTCAGATATACTAAATTATAATGAGGAAATTTTTCATGAAGAAACTGAagaacagcaacagcagcaacaacaatatcaaCAACAAGCCGATGTTATAGAATTGGAAGACGAATATGAAGACGGAGAAGAAGAATACAACGAGGAAAATATACAATATGTATATGATGAATATGAAGCTGATGAGTATGAAGAACAACAAGGAGACGAACAATACGAACAGGTAGAGCAAGAAACCGATGAAAAAACCCTTATAATAGATGtaaaaccggaaaaaatcgcTGAATTCGATCTACCACaaacttcatataaaaaattcacaACCTTAAAAGCTGAAGACAAAAATGAATCCGAAATAATGGTTTTAGAAGGAAACGATGATCAAGATTTTATGGTTATCGAAGTGTtggagaatgatgatgacgatttCCAGGAACAAGAACAAATGCAGCAAATACAAACACAAGATGTTAAGcccaaaataattaataaaaatgctcATAAATCTACTGTTACAAaatcGCAGAAAATTTCACAAGAGCGAATTGCCGACTATTTTGGCTTTGAAGTTAACAGTGATGAAGAAGAGGAAGAAAAAGACGACGATACCAAAGGAGTTATAAAAATACTCGAGATGATCGAGGAAGACTAA
Protein Sequence: MTSPKDQGDYKPLVEKIDTELDYVGESRELTSNPNHGPESETTGGDVKTIFMDADGNYYYQSSGKMVRVEALAKEPETKMERRSVNKRRASATPASVKKPKVEVSNSKKSKDEKDDLKNTDTTITSDIGNQEEVYEFDENEQSPDDAPDADDPDYECKAIIKDSLNAKAKETALFTWHKPFGCSSCDMAFTTSGELVRHVRYRHTHIKPHKCTECDYSSVELSKLRRHMRCHTGERPYQCPHCTYASPDTFKLKRHLRTHTGEKPYECDICHSRFTQSNSLKHHRLIHSVNDKPVFQCQLCPTTCGRKTDLRLHIKNLHSSDQPLPCKRCGKELPDRYSYKMHIKTHEGEKCYRCEYCPYSSISQRHLESHVFIHLDAKPFVCEICQNTFRQKQLLNRHIKIYHSDNFEPPKVRTKDHKCPHCDKLFAFNGNLIRHMEIHDPTSRQFEEKIQLKIGRMKRVKPDGTVVMKPSTGAFSDILNYNEEIFHEETEEQQQQQQQYQQQADVIELEDEYEDGEEEYNEENIQYVYDEYEADEYEEQQGDEQYEQVEQETDEKTLIIDVKPEKIAEFDLPQTSYKKFTTLKAEDKNESEIMVLEGNDDQDFMVIEVLENDDDDFQEQEQMQQIQTQDVKPKIINKNAHKSTVTKSQKISQERIADYFGFEVNSDEEEEEKDDDTKGVIKILEMIEED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01074711; iTF_01397740; iTF_01399697;
90% Identity: -
80% Identity: -