Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465277.1:148978420-148982058[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.063 8.1 8.6 7.0 1 23 121 144 121 144 0.96

2 16 0.086 11 8.2 0.6 1 23 150 173 150 173 0.97

3 16 0.0012 0.15 14.1 1.3 2 23 204 225 204 225 0.95

4 16 0.09 12 8.1 0.9 1 23 302 325 302 325 0.97

5 16 0.027 3.5 9.8 0.2 2 20 414 432 413 435 0.94

6 16 0.0052 0.67 12.0 2.3 1 23 508 531 508 531 0.94

7 16 0.0099 1.3 11.2 0.4 1 22 538 559 538 559 0.95

8 16 0.00018 0.024 16.6 1.6 2 23 614 635 613 635 0.96

9 16 0.34 43 6.3 0.0 2 20 662 680 661 682 0.88

10 16 0.00028 0.036 16.0 5.5 1 23 733 756 733 756 0.98

11 16 0.0091 1.2 11.3 2.3 1 23 793 816 793 816 0.97

12 16 0.035 4.4 9.5 3.8 1 23 879 902 879 902 0.97

13 16 1.6e-05 0.0021 19.9 5.0 1 23 912 934 912 934 0.99

14 16 2e-05 0.0025 19.7 0.6 1 23 978 1000 978 1000 0.99

15 16 0.00011 0.014 17.3 4.0 1 23 1006 1028 1006 1028 0.99

16 16 1.2e-05 0.0015 20.3 3.2 1 23 1034 1056 1034 1056 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.063	8.1	8.6	7.0	1	23	121	144	121	144	0.96
2	16	0.086	11	8.2	0.6	1	23	150	173	150	173	0.97
3	16	0.0012	0.15	14.1	1.3	2	23	204	225	204	225	0.95
4	16	0.09	12	8.1	0.9	1	23	302	325	302	325	0.97
5	16	0.027	3.5	9.8	0.2	2	20	414	432	413	435	0.94
6	16	0.0052	0.67	12.0	2.3	1	23	508	531	508	531	0.94
7	16	0.0099	1.3	11.2	0.4	1	22	538	559	538	559	0.95
8	16	0.00018	0.024	16.6	1.6	2	23	614	635	613	635	0.96
9	16	0.34	43	6.3	0.0	2	20	662	680	661	682	0.88
10	16	0.00028	0.036	16.0	5.5	1	23	733	756	733	756	0.98
11	16	0.0091	1.2	11.3	2.3	1	23	793	816	793	816	0.97
12	16	0.035	4.4	9.5	3.8	1	23	879	902	879	902	0.97
13	16	1.6e-05	0.0021	19.9	5.0	1	23	912	934	912	934	0.99
14	16	2e-05	0.0025	19.7	0.6	1	23	978	1000	978	1000	0.99
15	16	0.00011	0.014	17.3	4.0	1	23	1006	1028	1006	1028	0.99
16	16	1.2e-05	0.0015	20.3	3.2	1	23	1034	1056	1034	1056	0.98

Sequence Information

Coding Sequence: ATGCAAGTTgcaaagtctgtacctaccataatgttcagaaataaaaattgctcgtctattcgtactgtaagctgggggaaataccgatatttttctgtgcagcaacgcacttcatcagcaccctactATCTACGTTTCACTCTACCATATAtatcacCAAATGAAGAAATAAATCAACTTCGTGGAGATGATAACGATTATGATTCCGAAAACAGTTCTACATCTACGGCGGACGAAAGCGATCATATGtttgaaaaaagaaagaagGAAGATGAAATGAATAAGAGCGGTCAGCGATTCGATAAAAAGAAGAATGACAGAGATGCAATTGATGAACAAATTGAAAAAGTCCACGGTAATTTTGTATGTGCGATGTGCAAAAAATCATTTACTAGGCATAAATTATGTCGCAGGCATATACAATATACGCACAGACCAAAACAATTGTTCCAATGCCAATTTTGCGACAGCATTTCTAAATTTAAATCCAATATAATTACACATATTGAACGAGCACATCCTGGCGAGTCATTTGAATCCAATACAAAACAATTAGCTCGTTTGTTTGGAGAACGTCTGTATAGCAAACCTCTTCTATTACCACGGGCGGAATGTAAACTGTGTGGTTCTACTTTTACGAGTAAAAAAACACTTCTTCAGCACTTAGATAACCATAGGGAAGCCAGTACTCTTGATAGCTTAAAGTTAAGCAGTGATGTTATTCAGCGTTGGTTTTCAAATATGAGCGATTTGCCAGCCATAAAAACAATGATATGTAAAGATATTCGAGAAAAAAACTTGGTCAAatattacacaattttaaatgaCTTTTCCTATGAAATATCCATTAGTGATACGGATGCAGAAGATTTGGAAGAAGAAACAGAAGCACCTGCCAACAAATATAAATGCGAATTGTGTTTAAAagagtttttgtacaaatatcAAGTGTTTGCTCATTTGAGAGAGGATCATTTGAACGAAGAAACTTCTTTGAAATGTAGGCATTGTAAGTTGGAAtttatatcaataaaaatatatgaacagCACAATCAAACTCACTGTCAAAATGAACATAAACTATTGTTGTGCCCCAATTGCAATGGCAAGTTTGTCTGGctcgaaaatatgaaaaaacacaATTGTGTTACGAAAATATTAGATGTTGAAAAATTTCTGAAAGATGAAATTAGTATAAAGTGTAATGAAGTAATCCGTTCATCGCCCAAATCTATCATAAGATGTGGTCTTTGTGAAATGACCTTTGAAAAATTGCGCGATTTACGACAACACATGCCTTTGCACGCCGATGGCAAAACTGGAGTTGACTTTGATGGTTGTTTTTATGTAAATCAGTTTGAAAATTGTAACAGCAATCGCGAATTGTTACAACAGAAGATTAAAAATGCCTTTACGAAACGTCAAATAAGTCAGCTGTATCAAGCCATCGATAAGGACGGCAAAGAAATGGATATTTCAGATTCGGATAGCGATGAAGGTGATGCTGATGGtgaaaaaagttatttgtgTGAACTTTGCtatgaaacatttaaaaaacgaAAACTTCTATTTAATCATCAAAAGGAACAACACCAGGATGTTTCAATGCCTTTCACTTGCAAGGAATGTAAGATGCAATACGTTAGTATTGACTTGTTACAACAACATTTAAAGAGGGAATGTTGGAATGAAGATCGACGAGAAGCTGAACAATGCGATTGTTGTAAAGAACGTTTTATATGGCCGGAAAACATGTTGAGGCATAAAGAAATACAGCGATACATACGTATCAAAAATTCACTGCCTACGAACTTGTGTCATGACAATATCCAGATTTGCTATTGTTTCTTATGTCCTAAAAATTTCTCTAATGCTGATCTTTTAAATGATCATTTGATGCGCCATCGCTTAACACAATCCACCATCAAAACTGTTGCAAGCACTATACATTCTACATGGTGGCCAAATGGTAAAAAGAtcataaaatgcaaaatatgtgACCGAGAATTTTTAAGTATGGCCGCATTAAATGAACACTACGctataaaaaatctgaaaaatgtGTGTGGTGCAATACAACATTCTCTGGCAAATTACTCGATTACTAATCAAATGGGGTTTGAATTACATTTAGAACTGGATTCGGAAACAGAAACTGAATATATcgaaaatgaagaaaataaaaatttaatgccatATAGTTGTTGCATGTGTAATAAATCGTTTAAGCGAAAATATGAAATATCTCAACATCAAAGATCCATGCACAGTTATGAACTATTGGAACTCAAATGTGAACGTTGTGTTTTTAGAACTGTATCAGAGAAAGTTTTAGATTATCATAGAATCAGTCAGTGTTTTgatgttgagaaaaaatatcaaTGCCATCAGTgtaatttcaaatttatgtggCAAGAGAACCTTGAAAATcatatatcgatatttcataATTCAAACGTTTTCTTCAAAACATTGGACGAAGCTTCGTCGATTGATTTGTCATTACAACAAAACCATGTAGATGAACGGGATCGCGTTCAATCTATagataaatttcaatgtatagTTTGTGGAATGTACGTAATCAAAAATCATTATTCAGAACATATTAGGAGACACAAATATGACAAATCTTACAATTGCACTCTTTGCGAAATGGTTTTTTTAACGAGTTTCAGTTTATGTAAGCATAGGAGAATGAACCATAAGAATTTATATACCGACGAACGACCATACAGATGCAACATTTGTTcgaaattctttaaaaaatcggGACATCTGTCCAGTCATATGCAACGTCATGCAGATGGAAaggtaaaaacaaaaaaaaatttatcaacgccaGACAAGAGATACAAAGTATGTCCAATTTGTGGTGTCCTTAGAGCAAATATTGAAACACATATTAGAAGCCACACGGAGGAGACGAAATTCAAGTGCGATCTATGTGCTAAAATCTTTAGCACCGAAGTTAGTTTAACTGTGCATCGGCGCACTCACTTTAATAAACGTTCTTTTAAATGTACACTTTGCGAGAAAGCATATTTCCAAAAATGTCTATTAAAAGCTCACATGCGTTCTCACACTGGCGAGCGTCCATTTCAGTGCAATGTTTGCAAGAAAAGATTTATCCATTCGAGCAATATGAGTCGACATTTGCTTATCCATACTGATAATAATTAA
Protein Sequence: MQVAKSVPTIMFRNKNCSSIRTVSWGKYRYFSVQQRTSSAPYYLRFTLPYISPNEEINQLRGDDNDYDSENSSTSTADESDHMFEKRKKEDEMNKSGQRFDKKKNDRDAIDEQIEKVHGNFVCAMCKKSFTRHKLCRRHIQYTHRPKQLFQCQFCDSISKFKSNIITHIERAHPGESFESNTKQLARLFGERLYSKPLLLPRAECKLCGSTFTSKKTLLQHLDNHREASTLDSLKLSSDVIQRWFSNMSDLPAIKTMICKDIREKNLVKYYTILNDFSYEISISDTDAEDLEEETEAPANKYKCELCLKEFLYKYQVFAHLREDHLNEETSLKCRHCKLEFISIKIYEQHNQTHCQNEHKLLLCPNCNGKFVWLENMKKHNCVTKILDVEKFLKDEISIKCNEVIRSSPKSIIRCGLCEMTFEKLRDLRQHMPLHADGKTGVDFDGCFYVNQFENCNSNRELLQQKIKNAFTKRQISQLYQAIDKDGKEMDISDSDSDEGDADGEKSYLCELCYETFKKRKLLFNHQKEQHQDVSMPFTCKECKMQYVSIDLLQQHLKRECWNEDRREAEQCDCCKERFIWPENMLRHKEIQRYIRIKNSLPTNLCHDNIQICYCFLCPKNFSNADLLNDHLMRHRLTQSTIKTVASTIHSTWWPNGKKIIKCKICDREFLSMAALNEHYAIKNLKNVCGAIQHSLANYSITNQMGFELHLELDSETETEYIENEENKNLMPYSCCMCNKSFKRKYEISQHQRSMHSYELLELKCERCVFRTVSEKVLDYHRISQCFDVEKKYQCHQCNFKFMWQENLENHISIFHNSNVFFKTLDEASSIDLSLQQNHVDERDRVQSIDKFQCIVCGMYVIKNHYSEHIRRHKYDKSYNCTLCEMVFLTSFSLCKHRRMNHKNLYTDERPYRCNICSKFFKKSGHLSSHMQRHADGKVKTKKNLSTPDKRYKVCPICGVLRANIETHIRSHTEETKFKCDLCAKIFSTEVSLTVHRRTHFNKRSFKCTLCEKAYFQKCLLKAHMRSHTGERPFQCNVCKKRFIHSSNMSRHLLIHTDNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -