Tgro039514.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tachina grossa
Gene Symbol
ZNF296
Assembly
GCA_949987645.1
Location
OX465277.1:148870476-148875539[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 3.8 4.9e+02 3.0 3.3 1 23 249 272 249 272 0.87
2 20 0.0031 0.4 12.7 1.8 1 23 321 344 321 344 0.97
3 20 0.27 35 6.6 1.3 1 23 350 373 350 373 0.97
4 20 0.0008 0.1 14.6 0.6 2 23 404 425 404 425 0.97
5 20 0.13 17 7.6 0.8 1 23 502 525 502 525 0.96
6 20 0.064 8.2 8.6 2.6 2 23 533 554 532 554 0.97
7 20 0.0032 0.41 12.7 0.3 2 23 614 635 613 635 0.96
8 20 0.0022 0.28 13.3 1.4 1 23 708 731 708 731 0.95
9 20 1.6 2.1e+02 4.2 0.1 1 21 738 758 738 759 0.94
10 20 0.00023 0.03 16.3 1.6 2 23 814 835 813 835 0.96
11 20 0.19 24 7.1 0.2 2 19 862 879 861 882 0.90
12 20 0.00045 0.058 15.4 4.4 1 23 933 956 933 956 0.97
13 20 0.026 3.4 9.8 1.9 1 23 993 1016 993 1016 0.96
14 20 1.4 1.8e+02 4.4 0.4 1 23 1072 1093 1072 1093 0.93
15 20 0.0011 0.14 14.1 4.4 1 23 1099 1122 1099 1122 0.98
16 20 3.5e-05 0.0046 18.9 3.4 1 23 1132 1154 1132 1154 0.98
17 20 8.1e-06 0.001 20.9 0.2 3 23 1191 1211 1190 1211 0.99
18 20 4e-05 0.0051 18.7 5.4 1 23 1217 1239 1217 1239 0.99
19 20 8.4e-05 0.011 17.7 0.5 2 23 1245 1266 1245 1266 0.98
20 20 0.45 58 5.9 3.8 2 22 1273 1293 1272 1296 0.89

Sequence Information

Coding Sequence
atggtCAAGAGTATAATTAACGAATGTTTTATTAATGGGGTGATGTATAAATGTCGTACTTGCTTTGATCCTGCAAAAACAGTATATTCTCTTTCAGAGGAGTGCAGTAACTCCAGAACTTGTCAAGACCTATTGAATGATATTGTTAAGTTAAAGACAAACGATGATAAGTTACTTCCGAAGACGATTTGTTCAAAATGTTTGGACAAACTTATCAATTGCTACGATTTTATACTTCATATTCAAAATGTGAATGAAGAGTACCACCAACTTTTGGCAAGTGGGAAACATTCTTCAGAAAATGATAGTCTTGCAAGCAGCTCTAAGAATATTGCAAAATGCTTGGTAGAATCTGCCACTGCCTTGACTTTGGACCGGTGTGTTACGGAAATTAAGTGTGAAGACGAACATCTTATGTCTTAcgatattgttttaaataactACGATAGAAGAAACGATTCAGGCAAAGAagATATTTGTGATCCTTATATGGAAACTTTGAATGAGGATGTTAAGCTCTTTTCAGATAAGTTGGAGAGCCAACAAAGATCTCCAAATGAAGAAATATATCAAGTTCTTGAAGATGATCTCAACTATTGTGATTCGGAAAACAGCTCTACATCTACGGACGAAAATGATTTTCTGATTGCaaaaagaaagaagaaagaaaaaataaacaagatcAGTCACCGATTCGAAAAACAAAAGAATGATAGAGACAAAATTGATGAACCCAAGAAAAGTTTTCTGTGCTACATATGCAAAAGATCGTTTCATAAACTAAGCAGACTTCGTTTTCACATACAAGATATGCACGAAAACAAAACTAATCCAAGAACTAAATTTGGGTCCTCATCCTCCAGTGATAGTGAACGTGACCTGCCCAATAGTCAGACATTCGGAAAGAAATCTGAAACACAATTCTCCAAATATTTTCAAATCGAAAAAGTCAACGGTCATTACGTATGTGGGGTATGCAAAAAATCATTTACTATGCAGAATTCGTGTCGCAGGCATATAATTATGATCCACAGCCAAGAAAAGTCGTTCCCATGCGGATTTTGCGACAGAAGTGTGAGATGTAAGCCATACTTAATTTCACATCTAAAACGTATACATCCAGACGAGTCATTTGAAtccaataaaaaacaattaggTCGTTTGTTTGGAGAACGTCTGTATAACAAACCTCTTCTATTACCACGAGCGGAATGTAAGCTGTGTGGTTCAACTTTTACGACTAAAATAAAACTTCTTCAGCATATTGAGAGCCATAGTGAGTTTAGCACTCTAGACAGTTTACAATTAAGCAGTGATATTATTCAGCGTTGGTTTCCAAATATGAAGGATTTGGAAGTCGCAAAAAAAATGATATGTAAAGATATTCGAGAAAAACACTGGGTCAAATATTATACAATCTTAAATGACTTTTCCTATGAAATATCCATTAGTGATACGGATGCAGAAGACTTGGAAGAAAAAACAGAACCACCGGCCAACAAATATAATTGCGAATTGTGTTCAAAAGATTTTCTGTACAAATATCAAGTGTTTGCACATTTGAGAGAGGATCATTTGAACGAAAATATTCCTTTGAAATGTAGCCGTTGCAAGTTAGAATTTATAtctacaaaaatgtatcagCAACACAGACAAACTCACTGTCGAAATGAACATAAACTACAGATTTGCTCTAATTGTCCTGGCAAGTTTCTCTGGctcgaaaatatgaaaaaacacaATTGTGTTacgaaaacattaaattttgaaaaatctctaAATTATGATATTAGTGAAAGTTACAATGAAGTAGTGCGTTCATCGCCAAAGACTATCATAAGATGTGGTCTTTGTGAAATGACCTTTGAAAAGCTGCGAGACTTACGACAACACATGATTTTGCACGCGGATGGTGATACTGGCATTGACTTTAATGGCTGCATTTATGTAAATCAATTTGAAACTTCATCCAGCAATCGCGAATTGTTGCAACAGAAGATTAGAAATGCCTTCAAGAAACGTCAAATAAGTCAACTGTATCAAGCCATCGATAAGTACGGCAAAGAAATGGACATTTCAGATTCGGAAACCGATGAAGATAATGTTGATTGTGAAAAAAGCTATGCGTGCGAACTTTGCTATGAAACGTTTAAAAAGCGAAAACTGCTGTTAAATCATCAAAAAGAACAACACAAGGATGTTTCAATGCCTTTTACTTGCAAGGAATGTATTATGCAATACGTTAGTATTGACTTGTTAGAACAACATCTAAAGAGGGAATGTTGGAATGAAAATCGAAGAGTAGCTGACCAATGCGATTGTTGCAAAGAACATTTTATATGGCCGGAAAACATGTTGAGGCATAAAGAAATACagCGATACATACGTATCAAAAATTCACTGTCAGAGAACTTGTGTCGTGACAATATCCAAATTTGCTATTGTTTCTTATGTCCTAAAAATTTCTCTAATGCTGATCTTTTAAATGATCATTTGATGCGCCATCGCTTAACACCATCCATCATCAAAACCGTTGCAAGCACAATACATTCTACATGGTGGCCAAATGGCAAAAAGAtcataaaatgcaaaatatgtgATGAAGTATTTTTAAGTATGGCCAaactaaataaacatttttcttcTAAAGATCCCAAAAACCTCTGTGGTCTTAGGCAGCACTCCCTGGCAAATTACTCGATTACTAATCACATGGGGTTTGAATTACATTTAGAGCTAGACTCGGAAACAGAAACTGAATGCATTGAAaatgaagaaaacaaaaacaagtttccATATTGTTGTGCCATGTGTAATAAATCATTTAAGCGAAGATATGAAATATCTCAACATCAAAGATCCATGCACAATTATGAGTTGTTGCAACTGAAATGTGAACGTTGTGTTTTTAGAACTGTATCACAGAAAGTTTTAGATTATCACAGAATGAGCCAGTGCTTTAATGTTGAGAAAAAACACCAATGCGATCAGTgtaatttcaaatttatgtggCAAGAGAACCTTGAAAAGCATATTTCGATATTTCATACTTCGAACGTTTTCGTCAAAGTATTGAATGCTGATAGTGCAACGAATTTGAATGACGGAAGCAATATTAATTATCAATGCCTTGAATCAGAAGAAGTTTTGCAGAATGATTTGTCATCAGCATTAAATCAAGATGCCGGGAAATGCATTCAATCTAAATATAAATTCCAATGTCTCATTTGTGGAATATACATTGCCAAAAAGAATTATTCAGAACATATAAGGAAACACAAATGTGACAAATCTTACAAATGCAATTTTTGCGAAATGGCTTTTATATCATTCTCCTCTTTAAAGAATCATAAACGGATGTGCCATAAGGTTTTACACACCGACGAAACACCATACAGATGCACACTTTGTTCGAAATTGTTTAGACAAGCGTCACATCTGGCTTCTCATATGAGATTTCATTCCGGGGAAAACccaaaaatacaaaagaatTTATTGCCGACGACAGACAAGAAATTGGACTCGAAAGGTTCTATTCAGCATACACAAGGAGaaggaaagaaaaaattatgtccAATATGTGgtgtctatttttcatacaaaacaaaTCTTAAAATACATATTAGAAGCCATAAGGGTGAGAGGACATTCAAGTGCGATCTTTGTGATAAAGCCTGTAATACTCGAGCCCATTTAAATCAGCATCGACGCACTCACTTTACTGAAATTCCTAAATGTTCAATTTGCGAGAAAACTTTTCCCATAAGATCCAAACTGGAAACTCACATGCTCGTTCACATGAAGGAGAAACCATCTACATGCAAGATTTGCAATCGAGCTTTTAAATGTGACTCATATCTCAAACAGCATCGTACCAAAACTGGGCATCATACAGAAAATAATTGA
Protein Sequence
MVKSIINECFINGVMYKCRTCFDPAKTVYSLSEECSNSRTCQDLLNDIVKLKTNDDKLLPKTICSKCLDKLINCYDFILHIQNVNEEYHQLLASGKHSSENDSLASSSKNIAKCLVESATALTLDRCVTEIKCEDEHLMSYDIVLNNYDRRNDSGKEDICDPYMETLNEDVKLFSDKLESQQRSPNEEIYQVLEDDLNYCDSENSSTSTDENDFLIAKRKKKEKINKISHRFEKQKNDRDKIDEPKKSFLCYICKRSFHKLSRLRFHIQDMHENKTNPRTKFGSSSSSDSERDLPNSQTFGKKSETQFSKYFQIEKVNGHYVCGVCKKSFTMQNSCRRHIIMIHSQEKSFPCGFCDRSVRCKPYLISHLKRIHPDESFESNKKQLGRLFGERLYNKPLLLPRAECKLCGSTFTTKIKLLQHIESHSEFSTLDSLQLSSDIIQRWFPNMKDLEVAKKMICKDIREKHWVKYYTILNDFSYEISISDTDAEDLEEKTEPPANKYNCELCSKDFLYKYQVFAHLREDHLNENIPLKCSRCKLEFISTKMYQQHRQTHCRNEHKLQICSNCPGKFLWLENMKKHNCVTKTLNFEKSLNYDISESYNEVVRSSPKTIIRCGLCEMTFEKLRDLRQHMILHADGDTGIDFNGCIYVNQFETSSSNRELLQQKIRNAFKKRQISQLYQAIDKYGKEMDISDSETDEDNVDCEKSYACELCYETFKKRKLLLNHQKEQHKDVSMPFTCKECIMQYVSIDLLEQHLKRECWNENRRVADQCDCCKEHFIWPENMLRHKEIQRYIRIKNSLSENLCRDNIQICYCFLCPKNFSNADLLNDHLMRHRLTPSIIKTVASTIHSTWWPNGKKIIKCKICDEVFLSMAKLNKHFSSKDPKNLCGLRQHSLANYSITNHMGFELHLELDSETETECIENEENKNKFPYCCAMCNKSFKRRYEISQHQRSMHNYELLQLKCERCVFRTVSQKVLDYHRMSQCFNVEKKHQCDQCNFKFMWQENLEKHISIFHTSNVFVKVLNADSATNLNDGSNINYQCLESEEVLQNDLSSALNQDAGKCIQSKYKFQCLICGIYIAKKNYSEHIRKHKCDKSYKCNFCEMAFISFSSLKNHKRMCHKVLHTDETPYRCTLCSKLFRQASHLASHMRFHSGENPKIQKNLLPTTDKKLDSKGSIQHTQGEGKKKLCPICGVYFSYKTNLKIHIRSHKGERTFKCDLCDKACNTRAHLNQHRRTHFTEIPKCSICEKTFPIRSKLETHMLVHMKEKPSTCKICNRAFKCDSYLKQHRTKTGHHTENN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01399801;
90% Identity
-
80% Identity
-