Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465277.1:148861386-148867265[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.0005 0.064 15.3 2.4 1 23 85 108 85 108 0.92

2 19 2.9 3.7e+02 3.4 0.8 2 23 115 137 114 137 0.94

3 19 0.00053 0.068 15.2 0.7 2 23 168 189 167 189 0.95

4 19 0.26 33 6.7 2.5 1 23 266 289 266 289 0.97

5 19 0.04 5.2 9.3 1.9 2 23 297 318 296 318 0.97

6 19 0.026 3.4 9.8 0.2 2 20 334 352 333 355 0.94

7 19 0.037 4.8 9.4 0.9 1 23 428 451 428 451 0.91

8 19 0.0077 0.99 11.5 0.6 1 22 458 479 458 479 0.96

9 19 0.0016 0.21 13.6 3.1 3 23 548 568 546 568 0.94

10 19 0.0014 0.19 13.8 0.1 2 20 595 613 594 615 0.94

11 19 0.00022 0.028 16.4 6.0 1 23 666 689 666 689 0.98

12 19 2.2 2.8e+02 3.8 0.2 5 23 730 749 729 749 0.89

13 19 0.0018 0.23 13.5 1.6 1 23 823 845 823 845 0.98

14 19 7.1e-05 0.0091 17.9 3.5 1 23 851 873 851 873 0.98

15 19 5.9e-05 0.0076 18.2 0.7 1 23 881 903 881 903 0.99

16 19 9.4e-06 0.0012 20.7 2.0 1 23 909 931 909 931 0.98

17 19 0.037 4.8 9.4 1.4 1 19 937 955 937 957 0.97

18 19 0.0016 0.21 13.6 1.7 1 23 1035 1058 1035 1058 0.95

19 19 0.0062 0.79 11.8 0.3 1 22 1065 1086 1065 1086 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.0005	0.064	15.3	2.4	1	23	85	108	85	108	0.92
2	19	2.9	3.7e+02	3.4	0.8	2	23	115	137	114	137	0.94
3	19	0.00053	0.068	15.2	0.7	2	23	168	189	167	189	0.95
4	19	0.26	33	6.7	2.5	1	23	266	289	266	289	0.97
5	19	0.04	5.2	9.3	1.9	2	23	297	318	296	318	0.97
6	19	0.026	3.4	9.8	0.2	2	20	334	352	333	355	0.94
7	19	0.037	4.8	9.4	0.9	1	23	428	451	428	451	0.91
8	19	0.0077	0.99	11.5	0.6	1	22	458	479	458	479	0.96
9	19	0.0016	0.21	13.6	3.1	3	23	548	568	546	568	0.94
10	19	0.0014	0.19	13.8	0.1	2	20	595	613	594	615	0.94
11	19	0.00022	0.028	16.4	6.0	1	23	666	689	666	689	0.98
12	19	2.2	2.8e+02	3.8	0.2	5	23	730	749	729	749	0.89
13	19	0.0018	0.23	13.5	1.6	1	23	823	845	823	845	0.98
14	19	7.1e-05	0.0091	17.9	3.5	1	23	851	873	851	873	0.98
15	19	5.9e-05	0.0076	18.2	0.7	1	23	881	903	881	903	0.99
16	19	9.4e-06	0.0012	20.7	2.0	1	23	909	931	909	931	0.98
17	19	0.037	4.8	9.4	1.4	1	19	937	955	937	957	0.97
18	19	0.0016	0.21	13.6	1.7	1	23	1035	1058	1035	1058	0.95
19	19	0.0062	0.79	11.8	0.3	1	22	1065	1086	1065	1086	0.96

Sequence Information

Coding Sequence: ATGGAAACTTTGAATGAGGATTTTGAGCTCGCTTTAGATAAGTTGCAAAGCCAACAAACCCAAcaaagCTCTACATCTACGGACGAAATCGATTATCTGaatgaaagaagaaagaatAAAGCTAAAATGAACAAGAGcagGTCCTCACCCTCCAGTGCAAGCGAAACTGACCTATGTGATAGTCAGACATTCGGAAGGAAAACTGAAGAACAATTTTCCAAATACTTTCAAATCGAAAAAGTAAACGTTGATTTCATATGTGGGATTTGTAATAAATCATTTACTAGGCAGGATTCTTGCCGGAGGCATATATTTCTAGTACACTGCCAAAACAGATCGTTATCATGCGTATTTTGCGGCATAAATGTGAGATGTAAGGCATACTTAATTTCACATCTTAAACGTGTACATCCAGGCGAGTCACTTGAATCCAATCAAAAGCAATTAGGTCGTTTATTTGGAAAACGTCTGTATAGCAAACCTCATCTATTACCACGAGTGGAGTGTAAACTGTGTGATCCAACTTTCAAGACTAAAAAACAACTTCTTCAGCACTTGGATAATCATAGTGAGGCCAGAACTCTTGATAGCTTAAAATTAAGCAGTGATATAATTCAACGTTGGTTTCCAAATATCACGGATTTGGAGATCATAAAACTAATAATATGTAAAGATATTCGGGAAAACaatttatacaaatattatagaattttaaatgaattttcttATGAAATATCCATTAGTGATACGGATGCAGAAGATTTGAAAGAAGCAACAGAAGTGCCTGCCAGCAAATATAAATGCGTATTGTGTGCAAAAGACTTTTTGCACAAATATCAAGTgtttgctcatatgaaaaataatCATTTGAACGAAAAACTTCCTTTGAAATGTAACCGTTGCAATTTGGAATTTATATCTACAAAAATGTATGAACAACATAAACAAACTCACTGTCAAAATGATCATAAACTACTGATTTGTTCTAATTGTCCTGGCAAGTGTGGTCTTTGTGAAATGACCTTTGAAAAACTGCGTGATTTACGACAACACATGCCTTTGCATGCCGATGGCAAAACTGGAGTTGATTTTAATGGTTGCATTTATGTAAATcaatttgaaaatgtatcaagCAATCGTGAATTGTTGGAACAGAAGATTAAAAATGCCTTCACGAAACGTCAAATAAGTCAACTGTATCAAGCCATCGATAAGTATGGTAAAGACATGGACATTTCAGATTCTGATAGCGATGAAGATGATGCTGATGGTGAAAAAAGCTATTTGTGCGAACTTTGCTATGCAACGTTTAAAAAGCGAAAACTGCTGTTAAATCATCAAGAAGATCAACACAAAGATGTTTCAATGCCTTTCACTTGCAAGGAATGTAGGATGCAGTATGTTAGTACTGATTTGTTGCGACAACATATAAAGAGGGAATGTTGGAATGATCATCGACGAGTGGCTGAACAATGCGATTGTTGTAAAGAGCGTTTTATATGGCCGGAAAACATGTTGAGACATAAAGAAATACAGcgatacataaatattaaaaattcggTGTCGGAGAACTTACGTCGTACCGAGGTAGAAAAACTAATTTCTTCATCAGACTCAAGTGATAATATCGAGATTCGTTGTTGTTTCCTATGTCCTAAAACTTTTTCTAATACTGATAATTTTAATGACCATTTGGATAGTCATGGGTTCACACCATCCACCATCAAAACTGTTGCAAGCACAATACATTCTACATGGTGGCCAAATGGCAGAAAGactataaaatgtaaaatatgtgGCCAAGAATTTTCAAGTATGGCCGAATTAAATGAACACTACTctttaaaaaatctcaaaaacgtTTGTGGCGCCATGCAACATTCCTTGGATAATTACTCGATTACTAATCAAATGGGGTTTGAATTACATTTAGAGCTGGACACAGAAACAGAAACTGAATGCATTGAAAATGAAGAAAATAGAGAGATGTTGGCGTATAGATGTTGCATATGCAGTAAATCATTTAAGCGAAAATATCAAATATCTCAACATCAAAGATCCATGCACAATTATGAGTTGTGGCAACTTAAATGTGAACGTTGTTTTTTTAGAACTGTATCACAGAAAGTTTTAGATTGTCATAAAGTAAGCCAGTGTTTTAATGTTGAGAAAATGTACAAATACGATCAGTgtaatttcaaatttatgtggCAAGAGAACCTCGAGAAGCATATTTCGATATTTCATACTTCAAAAGATTTCGTCAAAGCATTGGATGCGGATAGCGCAACGATTTTAAATGAAGGAAGCAATATTAATGATCAAtgtcttgaattatatcaaaaCGATTCAGATGCAAGGGATTGCATTCAATCTAAAGATGTATGTAAATGTCTTAtttgtggaaattttattaCCAAAGAGAGTTGTTCGGAACATTTAAGGAAACACAAATATGATAAATCTTACAATTGCGATTTTTGCGAAATGTCCTTTTTAAGAAATGGCTCCTTAAATAGACATAAGCGCATGCATGCAGAACATCATCCTTTCAAATGCACGCTCTGCGAGAAACACTTCAGGCGGCAAGAAGATCTTCGTCTTCATAAACTTGTACACACCGGCAGAACCCATACGGGGTTCAAGTGCGATCTGTGTGATAAAAGCTTTAAGGTGGAATATAATGCAATAATACATCGACGCTCACACTTTAATGAACGTCCTTTTAAATGTACACTTTGCGAGAAATCCTTTGCCAATACAAGCAGATTAAGAGATCACATGCGCAACCATACTGGCGAACGTCCATATCAGTGCACAATTTGCCGACAAAAATTTATGACTTCGTTCGTTTTGAAGAAACACTCATATTATAACAAGGCACTAAGGAAGACATTGCCTGGAGTTGACTTTGATGGCTGTATTTATGTAAATCAATTTGAAACTTCATCCGGAAATCGCGAATTGTTGCAACAGAAGATTAGAAATGCCTTCACGAAACGTCAAATAAGTAAACTGTATCAAGCCATCGATAAGAAAGGCAAAGAAATTGATATTTCAGATTCGGATACGGATGATGATGAATCTGAAGGTGAAAAAAGCTATGCGTGCGAACTCTGCTATGAAACGTTTAAAAAGCGAAAAATGCTGTTTAATCATCAAAAAGAAGAACACAAGGATGTTTCAATGCCTTTCACTTGCAAGGAATGTAAGATGCAGTATGTTAGTATTGACTTGTTGCAACAACATATAAAAAGGGAATAA
Protein Sequence: METLNEDFELALDKLQSQQTQQSSTSTDEIDYLNERRKNKAKMNKSRSSPSSASETDLCDSQTFGRKTEEQFSKYFQIEKVNVDFICGICNKSFTRQDSCRRHIFLVHCQNRSLSCVFCGINVRCKAYLISHLKRVHPGESLESNQKQLGRLFGKRLYSKPHLLPRVECKLCDPTFKTKKQLLQHLDNHSEARTLDSLKLSSDIIQRWFPNITDLEIIKLIICKDIRENNLYKYYRILNEFSYEISISDTDAEDLKEATEVPASKYKCVLCAKDFLHKYQVFAHMKNNHLNEKLPLKCNRCNLEFISTKMYEQHKQTHCQNDHKLLICSNCPGKCGLCEMTFEKLRDLRQHMPLHADGKTGVDFNGCIYVNQFENVSSNRELLEQKIKNAFTKRQISQLYQAIDKYGKDMDISDSDSDEDDADGEKSYLCELCYATFKKRKLLLNHQEDQHKDVSMPFTCKECRMQYVSTDLLRQHIKRECWNDHRRVAEQCDCCKERFIWPENMLRHKEIQRYINIKNSVSENLRRTEVEKLISSSDSSDNIEIRCCFLCPKTFSNTDNFNDHLDSHGFTPSTIKTVASTIHSTWWPNGRKTIKCKICGQEFSSMAELNEHYSLKNLKNVCGAMQHSLDNYSITNQMGFELHLELDTETETECIENEENREMLAYRCCICSKSFKRKYQISQHQRSMHNYELWQLKCERCFFRTVSQKVLDCHKVSQCFNVEKMYKYDQCNFKFMWQENLEKHISIFHTSKDFVKALDADSATILNEGSNINDQCLELYQNDSDARDCIQSKDVCKCLICGNFITKESCSEHLRKHKYDKSYNCDFCEMSFLRNGSLNRHKRMHAEHHPFKCTLCEKHFRRQEDLRLHKLVHTGRTHTGFKCDLCDKSFKVEYNAIIHRRSHFNERPFKCTLCEKSFANTSRLRDHMRNHTGERPYQCTICRQKFMTSFVLKKHSYYNKALRKTLPGVDFDGCIYVNQFETSSGNRELLQQKIRNAFTKRQISKLYQAIDKKGKEIDISDSDTDDDESEGEKSYACELCYETFKKRKMLFNHQKEEHKDVSMPFTCKECKMQYVSIDLLQQHIKRE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -