Basic Information

Gene Symbol
hang
Assembly
GCA_949987645.1
Location
OX465277.1:108840484-108865742[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 18 0.21 26 7.0 0.9 3 23 453 474 452 474 0.92
2 18 0.41 53 6.1 3.4 3 22 577 596 575 596 0.90
3 18 0.0077 0.99 11.5 1.1 1 22 671 692 671 694 0.90
4 18 0.002 0.26 13.4 0.2 3 23 811 832 810 832 0.96
5 18 5.3e-05 0.0068 18.3 0.1 1 23 840 863 840 863 0.96
6 18 0.00058 0.074 15.1 0.1 2 23 952 973 952 973 0.97
7 18 0.0017 0.21 13.6 2.7 2 23 1023 1045 1022 1045 0.95
8 18 0.0067 0.87 11.7 0.2 2 23 1054 1076 1053 1076 0.95
9 18 0.0046 0.59 12.2 0.1 1 23 1089 1112 1089 1112 0.95
10 18 0.00021 0.027 16.4 1.1 1 23 1172 1194 1172 1194 0.99
11 18 0.057 7.4 8.8 1.1 1 23 1202 1225 1202 1225 0.96
12 18 0.21 27 7.0 0.2 2 20 1233 1251 1232 1251 0.95
13 18 5.3e-05 0.0068 18.3 0.1 3 23 1317 1337 1316 1337 0.98
14 18 0.00087 0.11 14.5 0.4 1 23 1372 1394 1372 1394 0.97
15 18 0.00083 0.11 14.6 2.1 2 23 1487 1509 1486 1509 0.91
16 18 0.92 1.2e+02 5.0 0.1 3 19 1530 1546 1529 1548 0.93
17 18 0.17 21 7.3 0.8 3 23 1564 1584 1564 1584 0.97
18 18 0.00096 0.12 14.4 0.7 1 23 1843 1865 1843 1865 0.98

Sequence Information

Coding Sequence
ATGTCGGATGAACGACACCAAATTCAGAAGCAGCAGCAACAAAATCAACATTCACAGCAGCTGCAGAGGAGACATAATTGCTGTCGCCTTTGTCTAGCGCCAGACAACGAATGTATATccattttaaatagttttgcTGCCGACAAGGAACCTTTAGCAAGTAAAATTAATACCTGTGTATCCGTTAAGaTTTCCAGCACTGATAACTTATCACTACGAATCTGTCATGCCTGTATAAGCTACTTAAACTCTTGGCAATCTTTTAAGAATCGTTGTCTCGCAGCGCAGGCTAAACAACGTTCTTGGCTGGAAGTATCAAACAAATCAATACAATCTGGCGAGCAACATCACCAAACAGCAGATAATAGCTATGACGATACACAATATCAACACTatcagcagcagcaacagcagccTCATCAGCAAGATGAACAGTCATTGGCTTCTTCTATATTGGAGGGAAtttcaacattaaaaaaacgCAAATCGTTAACAGTCTATGTGAGTCCTAAATCGCATcaaactaaacaacaacaagaaaaattaTTACAGAAACAGCAACTAAATTTCACTATGCCGTTAACAAAACGTCACTATACCAAACATAAATATAACAAGTCACAGCAACAGTGGCAAAATCAAATGTcacaaacaacaacagcagcgcAACATGTACAAGCAATGTCTGGCAAAACCAGACAAAAATCGGacaagaaacaaagttcagCAAACCAGCAATCACTATTAGCCACTTGCGCCCCCTTACAGCAATCATTTGTAATGCCGGCCATTCCCAGTGTGACTGCTACAGTAACTTGCACGATTACTGCATCAGCTCTTGCCACTACTGCACTGGTGACAACTGGCTTAAATACTCCTACCAACACAACATTAACTAATACGACAACGGTGGCCACTGGCAGCAGTCGTGTCGAAACCGTAACAGCATCTAAAAGCACTGCTGTTGCTACAAGTACTGATTCGGCTGTTAGGGTTGGTGCTAGTGACGAATGTTTGGGGGGTGCATCAAATACATCCTCATCGAGCATCGCTTGTACAAGTGCTGTGCAACAACTGCGCTTGTTTAGACGATACTCCTATAATCCGTTACCTGCAGTACAAATAAAAGATGAACCAATTGAGACTGAAGATGATTACAACGGAGCGAAGCATCTGCAACATGACGAATCGGATGATATGGTCGTAGATCCTACCATGTTTTTGGAGCGTACCGCCGACGAGGGTGAATTTATGGAATCTTCTTCTATTTACGATTATGATGTTATAAAGCCACCTGCTGATTTGAAGCCATTACCAGCTAGTACAACAATACGTATGAGCACAAAAGAGGCTGCTTGCCGTGCTTgcaatttgaaattttcaacgcGCGCCAATGCACGACGCCATGAGAAGAACTTGCATCCCAATCTCTTTGAGACTTTGGAAGAAAATGATCAGTCCATTAATAAACAAACCGCCGCATTAAATGCCTCCCTAGAGCTACAAAGAGCTGTGGCAGCTGCTGTAGCCGCCGATGCATGCAAACTATCCAGCGGTGCTGTTATAACACCACAAAAATATCGTCAAGAAGTTGTCAACGCTTTCAATAATAGTGAATTCGGATTTGATTATGATAATCCGGAGAAGTACCGTGAGCTGTTAACAGACGAGAAGATTATCTTCCTTCAACAAAACGATGAATTTCTGAGACAATATCAAAACATGACTTGTCGCTGTTGTAACAAATACTATTCAACCTATAAAAATTTCATGGCTCATATGCGCAAAAAGTACCTAACACTACCCAGAAATTGTTGTTTCAATTGCTTAAAACTAAATGATTCCAAAGCATTGTTTATCTCACATTTGAAGAAGCGCAATTGTATAAATTTGCATAAAGTGTTGCATAGTCTTATGGCGAGAAATGCCAACTTTGCAGCTGCTGTTACAGCAACAGTGGCTGCGGCTCCAGAAAAAGTACGCGCCAAAGAATTGTTGGTCAATAAAATGTACGAATGTAAACTGTGTCCAAAAACTTTCCGTCTAAAATTAGAATTCCGTTCACATGTTTATGATGAGCATGACGATGTCCAACGCAAAGATGTTAGCAGTACTCAATGTTGTTATTGCGCTATTGATATCGAAGATCCAGCTGATCGCAAGCGTCATTATAACAATATGGATTGTATTGTCACATTACGATGTGTTACTTGTGACACAAAACATGAAACACAACAAAAGTTTATGGAACATGTGCAGGAAAAGCATTTAGCCAATTTTGGCGAACAGTCGAAACTCTTATTAAGTGCTGATAATTCTCCGGGCAAAATGATGGGAGgTGCATCATCAGCTGATGATTCGCGAAGTGGTAATGTCTCACTCATTAATACCACACCTAAAACACAATACTTTTCACGTATGCCACAAGCTTGTCCGATTTGTGGCCAGCAATACAATAACTACAACAATGTTTTGCGGCACATGGAATCAAAACATCCGGACCAGTTGCCACAAACTTATAAATGCGTTAAATGCGGACAAGGCTATCCAAGGTTATCAAATTTGCGAGAACATATGGTTAGCGCACATGGAGCTGATAAAGCACGCCATACCGGCTTTGAGTATATCGTTAATGCAGATGCGGTTAAAAGTGCAACTGGATCAACATCTACATCCCAAAATCCCTATACAGGACGTTATGATTATGTCATGAAGGATTTAATGTCTATAACAAATGGTGGGACAATTGCTGAAGAAGATTGTGATAGTGAAAATGCAGCTAAGAAAATGCGTTTAGATGCCAGTATTTCTGCTAATAACAACAATGGGTCAGTCACCACTGTCAGCCAAAGAGAATGTTCAATTTGCAGCGCTGTGTTTGCCAACAATATTGGCCTTTCCAATCACATGCGATCACATCAAAGTGCTGCTCAAAATAGTAATTATGGTACACAAAGTGCTAGAGCAGCGGGAAGTGGAAATGCCAACCAACAATCTATAAGCGGTCAACAACAAATATTAAGAAAATCTTTGGAGCAGGCTGCTGACCGGCGCTTCCGTCGTATGCGTTGTCGCATTTGTCAGCGTCGTTTCTCCTCGAAGAAGTCCTATCGTTACCACATGCTCAATGACCATCAAATTCGTAATGTACAATTTATAAAGTGTAAATTATGTGACGCTGAATTTGCGTATGAAAAGGGTTTGAAAGTGCATAtgtttaaaatacataatacaCTTCTGAAGGATGATATGATTATAAAGCAATATGAATGTGAAATTTGTTCCATAGTGTACCGTACGGATGTAGAGCTGCAACATCATTTAGCTAATGTGCATAACAAGCAAGGAGAACCATCCAACATACAAGACGAGGATGATATTTACAATGCGGATGAATCTATTGGGGCTGGTAATCCAGATAACAGTTCAGTGAGTGCTGATGTGTCGGGCAAAGCAAAACCTGTTGGTGGAGTGGCTTCTGGAGGAGAAGCCCAGTCGGGACCATTGTATTGGTATCAATGTAAATATTGCCCCTCGAactttaatacaaataaaaaattggcaatACATATCAATTCGCACGATGAGTTCGATTCGAATGATTATTCATGCAAAGATTGTGGCAACCTGTACAGTGGACGTAAAAGCTTATGGGTTCATCGCTATAAGAAACATCCTCAAATACCAGAACCTTCCGAATGTGTTATGtgtaaaaaagtattctttgaTGTCCAAATGTTGGAACATCATATTCCCTCATGTAATCGCAAACCTGTTACGCAAATGGGAAATGAAACTGCTAccactacatacaaacataaaactGGCGATGATGAGGATGAAGATGACGATGAACACTCGCGGGACGCCGACAATACCTTAAGAACCTCCATTACAGCCACTGTGGGCAGTgcaagtaatttaaaaataaaattacctgAAGTGGCTTGTACGATCTGTGGGGCTCGTTTCACTGATCAGGATCTGTTCGCCAAACATATACAAATGCATGAAATGGAACTGTATACAGACAATCCGTTGGCGGCCATGTTTGATACAGGTCCCGCTGATCCAAATCAGTTCTATATGGATCGTATAAATGATAATGGCGAGTATGCATGCGATTTATGTGCAAAAACTTTTACACAAATGACCGCACTTAAAGTGCATAGGAAATGGCATTTCAGAGGTGATAGCAAACAGaACGAAGCCGATCAACATACGTCGAGCAACTCTCATATACAACACTCACACCAACATCAACAAATCGTCAAGtcacagcaacaacaacagcaacaacaacatcaaccacaacaacaacaacatcatcatcatcaacagGCGAAATCCAAGATGCCGATCAACCATCAACGTCTACTGGGATTACAAGCGGTGGGTCTAATGCCGCGTCAATTTGCCAATACCTCCCACAGATCTCAGAAACGTAAACGTGAACTTAAATGTCCCCACTGTACCTCCACTTTCATTAGCAACAACAATTTGCGAAGGCACTTGTTTGAATTGCACAAAAATGAAATGGGCTATTTACCTGAACCACCAAGAATAGAATGTGATCTACCAAATATGTGCAGAAAGTGTAATATTAAGTTTGAAACAAAAGGCGAGTGGATTGAGCACAAAGTTGGAGAAGCCAGAGTTATGAGACCATTCGGACCATTTCAATGGGGTTGCGAGTTGTGCGGTGCATATGTATCTCGCAAAGAAAAGTTGATCAATCATTTGCACAATCATATGAAAGATCAAGTGATAGTTCCAGTAGAACGATCAGCTGAAGTGAAGAAGCAAGAGTCGCAACCACAGTCTAATCAAGTACAAATGGAAGAACAATCGCAAACGCAATCGCCTGGAGatcaaaagcaacaacaaaccGAAGGCAATGACGTCATGCCCAAATTCAAAAAGATTATAATACCTCCATTGTCGCAGAAACGCGAAGTAGATGAAGAATCAAGGGACAGTGTTAAAGATCAATATGACGAAGATGATGATGAGGATGACGATGACGATGAGGAGGAGGAGGGTGAAGGTGAAGCTGAAGGTGATGAAGCTGAAGCTGAAGTTGATAATAATGAAAATGAAGTTGGCATAAAGGAACAGCAGCAACAGCACCAACAAAAACCACCTGTCGCAGAAGAATATGATGAAGATGATGAAGAGGAGCAAGTTGAAGGATCAGAGTTTGATGATTTGGCAGTAGGTGCTCAACAAACGGTGGgcgatgatgacgatgatgtgGATGAGGATGATGACGATGAAGATGAGGATGACAGTAGTGATGCAGATGATGAAGAAGCTTCTACCAACGAAGACACTAATGATGCCTCAATTCTTAAAGTCAAACCAGCAGCTATAGCACAACCCCGCGCTTACAATGACATTGAAAACGACGATGTCGAAGAAGACGACGATTCCGATGACTtcgatgatgatgaagatgataaTTCATCTACAGAAAATCGAAAACCATCTTCAGCAGCAGTGGGTAATGTAGTTCTGAAGTCCCGTTATTCCTGTGATCTGTGCCAGGTGTACTTTGATTCACAACAAGAACTACAAAAACACGTTAAAATGCATTTCCTTAATGGTCCTGGCTCCGTAACATTAACCGAAATCAAATCCTCGAAATCTTCATCCAACAAAAGCCGTAGCAGTAGTAGCGATGTTGTAGCCGTATAG
Protein Sequence
MSDERHQIQKQQQQNQHSQQLQRRHNCCRLCLAPDNECISILNSFAADKEPLASKINTCVSVKISSTDNLSLRICHACISYLNSWQSFKNRCLAAQAKQRSWLEVSNKSIQSGEQHHQTADNSYDDTQYQHYQQQQQQPHQQDEQSLASSILEGISTLKKRKSLTVYVSPKSHQTKQQQEKLLQKQQLNFTMPLTKRHYTKHKYNKSQQQWQNQMSQTTTAAQHVQAMSGKTRQKSDKKQSSANQQSLLATCAPLQQSFVMPAIPSVTATVTCTITASALATTALVTTGLNTPTNTTLTNTTTVATGSSRVETVTASKSTAVATSTDSAVRVGASDECLGGASNTSSSSIACTSAVQQLRLFRRYSYNPLPAVQIKDEPIETEDDYNGAKHLQHDESDDMVVDPTMFLERTADEGEFMESSSIYDYDVIKPPADLKPLPASTTIRMSTKEAACRACNLKFSTRANARRHEKNLHPNLFETLEENDQSINKQTAALNASLELQRAVAAAVAADACKLSSGAVITPQKYRQEVVNAFNNSEFGFDYDNPEKYRELLTDEKIIFLQQNDEFLRQYQNMTCRCCNKYYSTYKNFMAHMRKKYLTLPRNCCFNCLKLNDSKALFISHLKKRNCINLHKVLHSLMARNANFAAAVTATVAAAPEKVRAKELLVNKMYECKLCPKTFRLKLEFRSHVYDEHDDVQRKDVSSTQCCYCAIDIEDPADRKRHYNNMDCIVTLRCVTCDTKHETQQKFMEHVQEKHLANFGEQSKLLLSADNSPGKMMGGASSADDSRSGNVSLINTTPKTQYFSRMPQACPICGQQYNNYNNVLRHMESKHPDQLPQTYKCVKCGQGYPRLSNLREHMVSAHGADKARHTGFEYIVNADAVKSATGSTSTSQNPYTGRYDYVMKDLMSITNGGTIAEEDCDSENAAKKMRLDASISANNNNGSVTTVSQRECSICSAVFANNIGLSNHMRSHQSAAQNSNYGTQSARAAGSGNANQQSISGQQQILRKSLEQAADRRFRRMRCRICQRRFSSKKSYRYHMLNDHQIRNVQFIKCKLCDAEFAYEKGLKVHMFKIHNTLLKDDMIIKQYECEICSIVYRTDVELQHHLANVHNKQGEPSNIQDEDDIYNADESIGAGNPDNSSVSADVSGKAKPVGGVASGGEAQSGPLYWYQCKYCPSNFNTNKKLAIHINSHDEFDSNDYSCKDCGNLYSGRKSLWVHRYKKHPQIPEPSECVMCKKVFFDVQMLEHHIPSCNRKPVTQMGNETATTTYKHKTGDDEDEDDDEHSRDADNTLRTSITATVGSASNLKIKLPEVACTICGARFTDQDLFAKHIQMHEMELYTDNPLAAMFDTGPADPNQFYMDRINDNGEYACDLCAKTFTQMTALKVHRKWHFRGDSKQNEADQHTSSNSHIQHSHQHQQIVKSQQQQQQQQHQPQQQQHHHHQQAKSKMPINHQRLLGLQAVGLMPRQFANTSHRSQKRKRELKCPHCTSTFISNNNLRRHLFELHKNEMGYLPEPPRIECDLPNMCRKCNIKFETKGEWIEHKVGEARVMRPFGPFQWGCELCGAYVSRKEKLINHLHNHMKDQVIVPVERSAEVKKQESQPQSNQVQMEEQSQTQSPGDQKQQQTEGNDVMPKFKKIIIPPLSQKREVDEESRDSVKDQYDEDDDEDDDDDEEEEGEGEAEGDEAEAEVDNNENEVGIKEQQQQHQQKPPVAEEYDEDDEEEQVEGSEFDDLAVGAQQTVGDDDDDVDEDDDDEDEDDSSDADDEEASTNEDTNDASILKVKPAAIAQPRAYNDIENDDVEEDDDSDDFDDDEDDNSSTENRKPSSAAVGNVVLKSRYSCDLCQVYFDSQQELQKHVKMHFLNGPGSVTLTEIKSSKSSSNKSRSSSSDVVAV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00760325;
90% Identity
iTF_01074706;
80% Identity
-