Tgro032534.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tachina grossa
Gene Symbol
Zbtb3
Assembly
GCA_949987645.1
Location
OX465277.1:5385816-5389743[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 15 0.36 47 6.2 2.4 5 23 190 208 189 208 0.95
2 15 0.0063 0.81 11.8 2.2 1 23 214 236 214 236 0.99
3 15 0.00061 0.079 15.0 5.2 1 23 292 314 292 314 0.98
4 15 1e-05 0.0013 20.5 0.3 1 23 417 439 417 439 0.96
5 15 0.15 20 7.4 1.0 1 23 445 467 445 467 0.92
6 15 8.2e-06 0.0011 20.9 0.3 1 23 484 506 484 506 0.98
7 15 0.0066 0.85 11.7 1.8 1 23 515 538 515 538 0.95
8 15 0.0058 0.75 11.9 3.5 1 23 544 566 544 566 0.98
9 15 0.00091 0.12 14.4 0.7 2 23 573 594 572 594 0.97
10 15 1.9e-07 2.5e-05 26.0 1.5 3 23 602 622 600 622 0.95
11 15 0.065 8.3 8.6 3.2 1 23 628 650 628 650 0.98
12 15 8.8e-05 0.011 17.6 1.3 1 23 656 678 656 678 0.94
13 15 9.2e-07 0.00012 23.9 2.6 1 23 684 706 684 706 0.99
14 15 2.7e-06 0.00034 22.4 0.7 1 23 712 734 712 734 0.99
15 15 5.9e-05 0.0076 18.2 0.5 1 23 740 762 740 762 0.97

Sequence Information

Coding Sequence
ATGCCTAATGACTTCAACTCTAAATGCCGCACTTGTCTAAGTGAATCAAATGTTTACCATCAACTGTTTGATTATGTGgaagaaaactataaaatattgGAGATGTTGGATAGTATAGTGCCCCAAATTGATATCAAGACTTCATCTCAATTTTCCACTTTAGTGTGTAAAATTTGTGTGGATAAATTGTTAACTGGTTATAAGTTTCAACAATTGTGCATAGAAACTAATAATCGGCTGCATGATTTGTTGGGGATTGCCGTCTTTGAGGCGGAGTCGAAATTGGAAAGGATACTGGATCCATTAACCGGCGAGACAAACCTTAAGATGAAACAGGAAATTGAGGAAGGTCCGTGTTTTGAATGCGAAGTTCCTCCCGATGACTTAATGGAAGGAATGGGGTCGGACAACAATAGCTCGGTTCTGGGTGCGGGTACTGATACAGATTCAAGCAATGAAAAACTATCAGTTTTAATGAAAAAGACCGTCAAAAAAGCTCCCGTTAagattgaaaattttgaaaaATTCCATAAACTAAATCGGCGTAAAGGTCACTTTTCTGATACTGAATGTCGTAAACATTTTAGCAGCTTAAATCGGTTAAAACAACATACATCTATACATGATAAAAAGCGGTGTTACACATGCCAAATTTGTAATACTAGAATAATGtttaagaaaacttttaaagCTCATATGTTAACGCATACAAATGGAGAGAGTGATTCCAAAAATATACCACAACTGATTGATGGTGTGTTAAATAACGACTCCAGGAAGAATTTTGAAACACAAGAGTTGTTAGATGAGGACCAAGTGAGTGATAAGGATGGAAAAGAAGATGTGTGCAAAGACTCAAAAGAAATGCTTACTTTTCAATGTCCAGATTGCTCGAAATGTTTTCAGAAAAAGACTTCATTCTCTGATCACTATAAAGTCCACAAGAAGAAAGAACTACTTAAAACTAAAAGCCAAACTTTTGAATCaggcttaaaaaatattgagGAGTTTAGTACGTCGAGCGAATTTCAGGATGAAAAAGCAATagccaaaatttcaaaaatcattgTCAAAAAAGAAATGGAAAACCCATCCCAATTATATGAAGGCGGCTTAGATTATGACGATAACTTGGGCAATGAATTGTTTGTCAAAACCGAAGCTAAAGAATGTAAAAATGTTGATTTCGGTGATACCGGCATAGGTGAAGTGGAAAAACCCAACAGCAGTAACAAAAGAAATGGTAATTTTCCCTGCGAAGTGTGCGGCAAAATATTCGATCGTCTTTATAGCTTAAAGCGACACAGTTCGGTGCATTCTCTTGAAAGACCACACGAATGCGAAATTTGTAAATATCGTTTTACCGCTGTCAGTATATTAAAAGCTCATTTGTTTCAACATACAAGTGAAACAGGAGGGAATTTACATTCTCAATCTCGACCCGAAGGTTTTAAGTGTCCCGATTGCCCTAGACGTTTTGAAAAACAAGTCTCACTCTTGGCTCATCGTCAAATTCACACACGCAATTCTTCAGAATCAAATTATCAATGTATGGTATGCCAGCGAAATTACACTTCAACAAGGTATTTAACGGAACACATCACAAATAAACATCCTGAAGTGGAAAAACACAAATGTGATCTGTGcgagaaaatttttgttttacatgccCATTTAGTTGAACATTTAAATCGTCATAAAAGTAACAGAAACGTTGTGTGTTTAATATGTGAAAAAGAATTTGGATATAACAACACGCTGAAAGAACATATCTGCACACATAGTGGCGAGAGTCCTCACCTTTGCCCCCAGTGCGGTAAAACATTTCGGAGTGCGAGTAATTTACGGCAACATATAGAAAGGCATACAGGTTTAAAAAAGTACCAGTGTACAGAGTGTCCCAGTCGTTTTAACTGTAGATCAGATATGACAAAACACGCATCAACACATTCGAATTTAAAGCCTCATATCTGCGACATTTGCGGATCTCGCTTCACCAGAGCATATTCCTTGCAAAAGCACAAGATTCTACATTCGGGAGAAAGACCATTTAAGTGTGATCAATGTAATATGACttTTGCGAGAATTTACTATTTACGGCGTCACATGCGAACCCACACAGGAGAGAAACCCTACAAATGCAAATATTGTGAACGTGCTTATGCTGAAAGCGGAGATTTAACTAAACATTTAAGAACCCATGTTGGcgaaaatacatatatgtgcGATCAATGTCCAATGGCATTTAAATATCAAGCTGAGTTAAAACAACATCAATCGCAGCATTACAAAATGGCACAAAAACTTTTACTGCAAACACAAAAGCTGTCCGATGAAGCGCGACATGAAATAAACGAACAAACACAACAAGATCAACATAATATGGAACATCAATTACAATTTCCAGTACGAGAACAGCAACAACATAATCAACAACCATCGAATCCTGAACAAATGCAACATTTGCCTGTAGGGATTCCGGGGTATCAATTATCGGCAATAGTGGAACAAACTGATAATCAAGCGAAAATTGAAGATATTGTTATAACCCGTCAACAAGACAGTTAA
Protein Sequence
MPNDFNSKCRTCLSESNVYHQLFDYVEENYKILEMLDSIVPQIDIKTSSQFSTLVCKICVDKLLTGYKFQQLCIETNNRLHDLLGIAVFEAESKLERILDPLTGETNLKMKQEIEEGPCFECEVPPDDLMEGMGSDNNSSVLGAGTDTDSSNEKLSVLMKKTVKKAPVKIENFEKFHKLNRRKGHFSDTECRKHFSSLNRLKQHTSIHDKKRCYTCQICNTRIMFKKTFKAHMLTHTNGESDSKNIPQLIDGVLNNDSRKNFETQELLDEDQVSDKDGKEDVCKDSKEMLTFQCPDCSKCFQKKTSFSDHYKVHKKKELLKTKSQTFESGLKNIEEFSTSSEFQDEKAIAKISKIIVKKEMENPSQLYEGGLDYDDNLGNELFVKTEAKECKNVDFGDTGIGEVEKPNSSNKRNGNFPCEVCGKIFDRLYSLKRHSSVHSLERPHECEICKYRFTAVSILKAHLFQHTSETGGNLHSQSRPEGFKCPDCPRRFEKQVSLLAHRQIHTRNSSESNYQCMVCQRNYTSTRYLTEHITNKHPEVEKHKCDLCEKIFVLHAHLVEHLNRHKSNRNVVCLICEKEFGYNNTLKEHICTHSGESPHLCPQCGKTFRSASNLRQHIERHTGLKKYQCTECPSRFNCRSDMTKHASTHSNLKPHICDICGSRFTRAYSLQKHKILHSGERPFKCDQCNMTFARIYYLRRHMRTHTGEKPYKCKYCERAYAESGDLTKHLRTHVGENTYMCDQCPMAFKYQAELKQHQSQHYKMAQKLLLQTQKLSDEARHEINEQTQQDQHNMEHQLQFPVREQQQHNQQPSNPEQMQHLPVGIPGYQLSAIVEQTDNQAKIEDIVITRQQDS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01397720;
90% Identity
-
80% Identity
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