Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465277.1:99604883-99618993[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 0.57 73 5.6 0.3 2 23 255 277 254 277 0.93

2 21 0.18 23 7.2 0.3 6 23 286 303 286 303 0.98

3 21 0.00026 0.034 16.1 6.6 2 23 310 332 309 332 0.96

4 21 2e-06 0.00026 22.8 1.4 2 23 339 360 338 360 0.97

5 21 0.00023 0.03 16.3 0.1 1 23 367 390 367 390 0.96

6 21 0.0014 0.18 13.8 0.8 2 23 395 416 395 416 0.96

7 21 0.053 6.8 8.9 0.3 1 22 424 445 424 447 0.90

8 21 0.036 4.6 9.4 0.3 1 23 459 482 459 482 0.96

9 21 8.7e-05 0.011 17.6 0.0 1 23 489 512 489 512 0.97

10 21 9.9e-06 0.0013 20.6 1.2 1 23 518 540 518 540 0.96

11 21 0.94 1.2e+02 5.0 3.8 1 13 546 558 546 560 0.89

12 21 0.29 38 6.5 0.5 2 23 759 781 758 781 0.93

13 21 0.12 15 7.8 0.3 6 23 790 807 790 807 0.98

14 21 2.2e-06 0.00028 22.7 0.7 2 23 814 836 813 836 0.97

15 21 5.3e-05 0.0067 18.3 4.0 2 23 843 864 842 864 0.97

16 21 0.0071 0.91 11.6 0.0 1 23 871 894 871 894 0.96

17 21 0.024 3 10.0 0.5 2 23 899 920 899 920 0.96

18 21 0.12 15 7.8 0.2 1 23 928 951 928 951 0.94

19 21 0.00024 0.031 16.2 0.1 1 23 958 981 958 981 0.97

20 21 7.9e-06 0.001 20.9 2.1 1 23 987 1009 987 1009 0.97

21 21 0.00018 0.023 16.7 2.7 1 23 1015 1038 1015 1038 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	0.57	73	5.6	0.3	2	23	255	277	254	277	0.93
2	21	0.18	23	7.2	0.3	6	23	286	303	286	303	0.98
3	21	0.00026	0.034	16.1	6.6	2	23	310	332	309	332	0.96
4	21	2e-06	0.00026	22.8	1.4	2	23	339	360	338	360	0.97
5	21	0.00023	0.03	16.3	0.1	1	23	367	390	367	390	0.96
6	21	0.0014	0.18	13.8	0.8	2	23	395	416	395	416	0.96
7	21	0.053	6.8	8.9	0.3	1	22	424	445	424	447	0.90
8	21	0.036	4.6	9.4	0.3	1	23	459	482	459	482	0.96
9	21	8.7e-05	0.011	17.6	0.0	1	23	489	512	489	512	0.97
10	21	9.9e-06	0.0013	20.6	1.2	1	23	518	540	518	540	0.96
11	21	0.94	1.2e+02	5.0	3.8	1	13	546	558	546	560	0.89
12	21	0.29	38	6.5	0.5	2	23	759	781	758	781	0.93
13	21	0.12	15	7.8	0.3	6	23	790	807	790	807	0.98
14	21	2.2e-06	0.00028	22.7	0.7	2	23	814	836	813	836	0.97
15	21	5.3e-05	0.0067	18.3	4.0	2	23	843	864	842	864	0.97
16	21	0.0071	0.91	11.6	0.0	1	23	871	894	871	894	0.96
17	21	0.024	3	10.0	0.5	2	23	899	920	899	920	0.96
18	21	0.12	15	7.8	0.2	1	23	928	951	928	951	0.94
19	21	0.00024	0.031	16.2	0.1	1	23	958	981	958	981	0.97
20	21	7.9e-06	0.001	20.9	2.1	1	23	987	1009	987	1009	0.97
21	21	0.00018	0.023	16.7	2.7	1	23	1015	1038	1015	1038	0.98

Sequence Information

Coding Sequence: ATGTTAGTAAAACAATGTTGTAGTTTGTGCTGCAGCAAATGCGATGAttataaattactaaaaaatgaATCGGGAGAAAACAATAAATACTACGAAACTACAGTTAAATATTTTGATCCCATGTTGCTTACAGATGAAGCAAACTCGAATATTCACCATATTCAGGTTCTTTGTCAAGAATGTTGGTATCACATAAACGAATTTCATGAATTTCAAGAAACGGTGTTGAAAACTCGAATTTTGGAACATAACGAGCATATAGAAACTTTGCCTATTGAAATAGAAGATTGTGAAAATGTGGATACAAATACCCACAGTAATACAAGTTTTGATGTAAGTTATGATGAAGATGATCGACTTGATTATTTCGAAAACCAATGTTTGCAAACAGAATCAATGACAATGTTAGAAGATACTACAGAATCGATACATAACCAAGCCAATGGAAAGGAAAAAGAACCAAAAAAGACCACTCTATCACAAGAGATTGACAAAACCAAGGATGAAGACGATCGACTTGATTATTTCGAAAACCAATGTTTGCAAACAGAACCAATGACAATGTTAGAAGATACTACAGAATCGATAGATAACCAAGCCAATGGCAAGGAAAAAGAACCGAACAAGAGCAAACTATCACAAGAGATTGACAAAACCAAGGATCAAAATGAATTACCATATACATTTAGAAGTGATAGaaagccaaaagaaaaaaagactAGAGTTTCGGATGCATTTATAGCTGAATGGAAACCTGAGTTAGTATGTGATATATGTAGTGAAGCCGCTAATAATTTTGATAAATTACGCAGTCACTTCAAAGAGAAAcataaaacaagattttatataaaatgttgcGAAAAAAAATTCGTCCAAAGAAATTTCCTGGTGAACCATATTCAATTACACCTTAATCCAGAAACTAACAAATGTCATACATGCGGAAAGCCTTGCACAACTAAACAAAGTCTCAAACAACATATGAAACAAATGCACGAAGAcacaaaacaattaaaatgtGACATTTGTGACAAGCTTTTCAAACGCAAATATACGTTGGAACGACATTTGCTCACACACGCCACGGGAAGTAAGGATTTCATTTGCTCTGAGTGTGGTAAGGGATATGTTGATGAAGAATTGCTTAAATTGCATGTTAAAAGTGTACATAATGTTGATCGCGTTTGCGACCAGTGTGGTAAAACTTATCATGGACTCTATGCTCTAAAGAAACATCTCATGGATCATGCAGGCATTGAGCGCCCTAAATTCCCTTGTGATGTTTGTGGTCTTAAACTGTCGTCAATAAGTGTCCTTAAACGTCATAAGGCTTTCAGACACAACGATGGTACAACTGGCATTGAGATCCGTAAATTCTCTTGCGATGTTTGTGGTTTTGAACTGATGTCAATAAATAGCCTTAAACGTCACCAGGCTTCCTACCACAGCGATGGTACAACTATATATGTTTGCGGTGTTTGCGGTAAAGTTACTGCAAATGAATACGCCTTAGCGAAACACAAAAGAGTAGTACATGTAGATGAACGTAAGCATAAATGCACATACTGCGAAAAGGCTTTTAAATCTCCTAAATCGTTGCGTGAACATATTGCAGCTCACACGGGAAAACGTCTGTATCAGTGTACACATTGTCCTCAAACATTTAAAGTAAAACAATGTTGTAGTTTGTGCTGCAGCAAATGCGATGAttataaattactaaaaaatgaATCGGGAGAAAACAATAAATACTACGAAACTACAGTTAAATATTTTGATCACATGTTGCTTACAGATGAAGGAAACTCAAATATTCACCATATTCAGGTTCTTTGTCAAGACTGTTGGTATCACATAAACGAGTTTCATGAATTTCAGCAAACGGTGTTGAAAACTCGAATGCTTTGGGAACATAAAGAGCAAATAGAAAATTTGCCTATTGAAATAAAATCAGAATATTGTGAAAATGTGGATACAAATAACCACTGTATTACAAGTTTTGATGTAAGTAATGATGAAAACGATCGACTTGATTATTTCGAAAACCAACGTTTGAAAACAGAATCAGTGACACTGTTAGAAGATACTACAGAATCAATAGATAACCAAGCCAATGGAAAGGACGAAGAACCGAAAAATAGCAAACTATCACAAGAGACTGACAAAACCAAGAATCAAAATGAAATACCATATAAAACTAGATTTGACCGAATGCCAAAAAAATTAACGAATAGAGTTTCGGATGCTTTTATAGCTCAATGGAAACCTGAGTTAGTATGTGATATATGTAGTGAAACCGCTAATAATTTTGATAAATTACGCAGTCACTTCAAAGAGAAACATAAAACAggcttttatataaaatgttgcgaaaaaaaatttgtccaaCGATATCGCCTGGTGAACCACATTCAATTACACCTTAATCCAGAAACTAACAAATGTGGTATATGCGGAAAGACTAGTACAACTAAATACGATCTCAAACAACATATGAAAGTAGTGCACGAAGAcacaaaacaattaaaatgtGACGTTTGTGAAAAGCTTTTCAAACGCAAACATACTTTGAAACGACATTTGCTCACACACGCCACGGGAAGTAAGGATTTCATTTGCTCTGAGTGTGGTAACGGATATGTTGATGAAGAATTACTTAAATTGCATGTTAAAAGTGTACATAATGCTGATCGCGTTTGCGACCAGTGTGGTAAAACCATTCATGGACTCTATGCTCTAAAGAAACATCTCATGGATCATGCAGGCATTGAGCACCCTAAATTCCCTTGTGATGTTTGTGGGCTTGAACTGTCGACAAGAACTATCCTTAAACGTCACAAGGCTTCCTACCACAACGATGGTACAACTATATATATTTGCGGCGTTTGCGGTAAAGTTACTGCAAGTGAACACGCCTTAGCGAAACACAAAAGAGTAGTACATGTAGAAGAACGTAAACATAAATGCACATACTGCGAAAAGGCTTTTAAATCTTCTAAATCGTTGCGTGAACATATTGCAATTCATACGGGAAAAGATCTGTATCGGTGCCCACATTGTCCTCGAACATTCAAAGGTAGTGCTTCTATGTATAATCATCGGAAAAAAGACCATCCAGTGGAATATGAGGAAGCTCAAAAAAATCGATTGCaacatccaaaaattaatagtaATCAAGTTAAAAAACTAGTTGTATTATAA
Protein Sequence: MLVKQCCSLCCSKCDDYKLLKNESGENNKYYETTVKYFDPMLLTDEANSNIHHIQVLCQECWYHINEFHEFQETVLKTRILEHNEHIETLPIEIEDCENVDTNTHSNTSFDVSYDEDDRLDYFENQCLQTESMTMLEDTTESIHNQANGKEKEPKKTTLSQEIDKTKDEDDRLDYFENQCLQTEPMTMLEDTTESIDNQANGKEKEPNKSKLSQEIDKTKDQNELPYTFRSDRKPKEKKTRVSDAFIAEWKPELVCDICSEAANNFDKLRSHFKEKHKTRFYIKCCEKKFVQRNFLVNHIQLHLNPETNKCHTCGKPCTTKQSLKQHMKQMHEDTKQLKCDICDKLFKRKYTLERHLLTHATGSKDFICSECGKGYVDEELLKLHVKSVHNVDRVCDQCGKTYHGLYALKKHLMDHAGIERPKFPCDVCGLKLSSISVLKRHKAFRHNDGTTGIEIRKFSCDVCGFELMSINSLKRHQASYHSDGTTIYVCGVCGKVTANEYALAKHKRVVHVDERKHKCTYCEKAFKSPKSLREHIAAHTGKRLYQCTHCPQTFKVKQCCSLCCSKCDDYKLLKNESGENNKYYETTVKYFDHMLLTDEGNSNIHHIQVLCQDCWYHINEFHEFQQTVLKTRMLWEHKEQIENLPIEIKSEYCENVDTNNHCITSFDVSNDENDRLDYFENQRLKTESVTLLEDTTESIDNQANGKDEEPKNSKLSQETDKTKNQNEIPYKTRFDRMPKKLTNRVSDAFIAQWKPELVCDICSETANNFDKLRSHFKEKHKTGFYIKCCEKKFVQRYRLVNHIQLHLNPETNKCGICGKTSTTKYDLKQHMKVVHEDTKQLKCDVCEKLFKRKHTLKRHLLTHATGSKDFICSECGNGYVDEELLKLHVKSVHNADRVCDQCGKTIHGLYALKKHLMDHAGIEHPKFPCDVCGLELSTRTILKRHKASYHNDGTTIYICGVCGKVTASEHALAKHKRVVHVEERKHKCTYCEKAFKSSKSLREHIAIHTGKDLYRCPHCPRTFKGSASMYNHRKKDHPVEYEEAQKNRLQHPKINSNQVKKLVVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -