Tgro039498.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Tachina grossa
Gene Symbol
-
Assembly
GCA_949987645.1
Location
OX465277.1:148716284-148739941[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 34 0.018 2.3 10.4 0.1 2 20 11 29 10 32 0.94
2 34 0.0023 0.3 13.2 2.0 1 23 105 128 105 128 0.92
3 34 0.013 1.7 10.8 1.5 1 22 135 156 135 156 0.96
4 34 0.0066 0.85 11.7 4.2 2 23 230 251 229 251 0.95
5 34 1.3 1.7e+02 4.5 0.1 2 19 278 295 277 298 0.91
6 34 0.0024 0.3 13.1 6.5 1 23 349 372 349 372 0.97
7 34 0.0087 1.1 11.3 0.9 1 23 409 432 409 432 0.97
8 34 6.9 8.9e+02 2.2 1.3 2 23 485 507 484 507 0.87
9 34 0.00012 0.016 17.2 0.4 1 23 513 535 513 535 0.97
10 34 0.00076 0.097 14.7 5.3 1 23 541 563 541 563 0.98
11 34 0.0049 0.64 12.1 5.0 1 23 569 591 569 591 0.98
12 34 0.00062 0.08 15.0 0.6 3 23 620 640 619 640 0.99
13 34 1.4e-05 0.0018 20.1 6.7 1 23 646 668 646 668 0.99
14 34 4.5e-06 0.00058 21.7 1.8 1 23 674 696 674 696 0.99
15 34 0.086 11 8.2 2.3 1 23 952 975 952 975 0.96
16 34 0.0038 0.49 12.5 0.6 2 23 1035 1056 1034 1056 0.96
17 34 0.0017 0.21 13.6 0.7 1 23 1133 1156 1133 1156 0.97
18 34 0.054 6.9 8.9 2.3 2 23 1164 1185 1163 1185 0.97
19 34 0.023 3 10.0 0.3 2 20 1239 1257 1239 1260 0.94
20 34 0.0023 0.3 13.2 2.0 1 23 1333 1356 1333 1356 0.92
21 34 0.013 1.7 10.8 1.5 1 22 1363 1384 1363 1384 0.96
22 34 0.0008 0.1 14.6 2.3 2 23 1458 1479 1457 1479 0.95
23 34 0.03 3.9 9.6 0.3 2 20 1506 1524 1505 1526 0.93
24 34 0.0033 0.42 12.7 4.2 1 23 1577 1600 1577 1600 0.95
25 34 0.0087 1.1 11.3 0.9 1 23 1637 1660 1637 1660 0.97
26 34 1.4 1.8e+02 4.4 1.2 2 23 1713 1735 1712 1735 0.88
27 34 0.00014 0.018 17.0 1.0 1 23 1741 1763 1741 1763 0.98
28 34 2.4e-05 0.0031 19.4 4.1 1 23 1769 1791 1769 1791 0.99
29 34 0.001 0.13 14.3 3.7 1 23 1797 1819 1797 1819 0.99
30 34 0.00032 0.042 15.8 0.7 3 23 1848 1868 1847 1868 0.99
31 34 5.5e-05 0.007 18.3 5.9 1 23 1874 1896 1874 1896 0.99
32 34 1.4e-06 0.00018 23.3 0.7 1 23 1902 1924 1902 1924 0.99
33 34 0.0024 0.31 13.1 1.0 1 23 1930 1952 1930 1952 0.96
34 34 0.08 10 8.3 2.7 1 21 1958 1978 1958 1982 0.89

Sequence Information

Coding Sequence
ATGAAGAGTTCATCGCCTAAAACTATCATAAGATGTGGTCTTTGTGATATAACCTTTGAAAAACTGCGCGATTTACGACAACACATGCCTTTGCACGCCGATGGCAAAACTGGAGTTGACTTTGACGGTTGCATTTATGTAAACCAATTTGAAAATCTATTAAGAAATCGAGAATTGTTGGAACAGAagattaaaaatgcatttacgAAATGTCAAATAAGTCAACTGTATCAAGCTATCGATAAGTACGGCAAAGAAATGGACATTTCAGATTCGGATAGCGATGAAGATGATGCTGAATGCAAAAAATGTTATTTGTGTGAACTTTGCAATGAAACGTTTAAAAAACGAAAACTTCTGTTTAAACATCAAAGTGAGCAACACAGGGATGTTTCAATGCCTTTCACTTGCAAGGAATGTAAAATGCAATATGTTAGTATTCATTTGTTGCAACAACATATGAAAAGAGAATGTTGGAATGAACATCGACGAGTGTCTGAACAATGCGATTGTTGTAAAGAGCGTTTTATATGGCCGGATAACCTGCTGAGACATAGAGAAATACAGcgatacataaataatgaaaatttgcaaacgGATAACGTGTGTCGTAGCCAGGCACAGAAAACAATAATAGCTTCATCTATCTCCAACTCTGATGTGACAAGTGCCAATATCGAagtttgttattgtttcttatgTCCTAAAACTTTCGCCAATCATGATCAGTTCAATGATCATTTGATCCGTCATCGTCTCGCATCATCCGCCATCAAAATTGTTGCAAGCACAATACATTCTGTATGGTGGCCAAACGGGAGAAAGacaataaaatgcaaaatatgtgACCAAGTACTTTTAAGAAAGGCCGAATTAAATGAAcatttttcttctaaaaattccaaaaacttGTGTGGTGGAGGGCAACATTCAGTGGCAAACTACTCGATTACTAATCAAATGGGGTTTGAGTTACACTTAGAGCTGGATTCGGAAACGGAAACTGAAAGCATCGACAATGAAGAAAATGAAGAgatattgccatataaatgtTGCATGTGTAGTAAATCATTTAAGCGAAAATATCAAATAACTCAACATCAAACATCGATGCACAATTATGAATTGTTGGAACTCAATTGCGAACGCTGCTTTTTTAGAACTGTATCACAGAAAGTTTTAGATTATCATAAAGTAAGCCAGTGTTTTAATGTTGAGAAAATGTACCAATGCGATCAGTgtaatttcaaatttatgtggCAAGAGAACCTCGAGAAGCATATTTCGATATTTCATACTTCGGACGTTTTCGTCAAAGCACTGCATGCGGCTAATAGAACGAGTAATACTAATGCTCAATGCTTTGAATCAAAAGAAGCTTCCCAGAATGATTTGTCGTCAGCATTACATCAAAACGATTCCGATGCAATGGACGGCATTCAATCAAAAGATAAATGTAAATGTATCATTTGTGGAATTTACATtaccaaaaataattattcagaACATATTAAGAGACACAAATGTGACAAATCTTACAAATGCGATTTATGCGAAATGGCCTTTATAACAAATAACTCATTAAAGAAGCATCAGGTCGTGCATACGGGAGAACGTCTTTTCGAATGTACATTATGCTCGAAATCGTTCAAGTATCAAAGAGGTCTATGTGTCCATAAACGTAAACATACCGAAAATCGACCACACAGATGCACaatttgttcaaaatcattTCTAAAATCGAACCATCTGGCTATTCATATGCGATACCATTCGCGTGAAAAGCCGACGCCAGACAAGAACTCGAACTCAATTGATTCTACTCAACTTGCACAAGGAGAGCGAAAGACAAACTTATGTCCTATTTGTGGTGTCTATTTGTCACACAAAACAAGTCTTAAAGTACATATTAGAAGCCATACGGGAGAGAGGCCATTCAAGTGCGATCTTTGTGATAAAAGCTGTACTACTAGTGTCCATCTAAATCGGCATCGACGCACACACTTTACTGAACGTCCTTTTAAGTGTACAATTTGCGAAAAGTCTTTTGTACATACAGGCGTATTAAAAGCACACATGCGCACTCACACTGGCGACCCTCAAGGAAATCACATAGATTCCTTActaaaaattaccaaaaatatgaaGAATGAGTGTTTTATTAATGGAGTGCAGTATAAATGTCGCACTTGCTTTGATCCAGGAACAACAGTATTTCTTCTTGCAGAAGAGTGCAGCAGCTCCAAAACTTGGCAAGATTTATTGAATGATATTGTTAAGTTAAAGAAAAACGACGACGAGTTACTTCCAAAGACCATATGTTCGAAATGTTTGGAGAAACTTATCAGTTACTACGATTTTATACTTCATGTTCAAAATGTGAATGAAAAGTACCATCAGCTTTTAGCAAGTGGCGAGAATTCCCCACAAAATGGTAGTCTTGCCAGCAGCTCTCAGAATACAGCAGAGTTATTGGCAGTATCTGCCACTGCCTTGTCTATCGGTCAGTGTGTTCCCGACATTAAGTTTGAAGACGAGCTACTTATTCCTTACGATATTGTCTTGAATAACAACAATAGAAGAAACGATGCGGTAAAAGAagATACTTGTGATCCTTTTATGGAAACTTTGGAAGGGGATATTGGGCACGCTTTAGATACGTTGAAATACGAACAAAGgtCACAAAATGAAGAAAATCGACTTCTTGAAGATGATATTAATGATTATAATTCCGATAACAGgtCCTCATCGACCAGTGCAAGTGAACATGACCTGCACACCAGTCAGCCATTCGAAAAGAAAACTGAAGAACGATTCTGCAAATACTTTCCAATCGAAAAAGGTAACAATAATTTTATGTGTGGGATATGCAACAAGTCATATACTTTGGATAGAAATTGTCGCAGGCATATAATCACGATGCACTACCAAGGGAATTTGTACAAATGTGCATTTTGCGATCAACATGCGCaatgtaaaaattacttaattggTCATCTTCAACGTAAACATCCAGGCGAATCATTTGAATCCAATGCGACACAATTAGGTCGTTTGTTTGGGGAACGTCTGTATAGCAAACCTCTTCTATTACCACGAGTAGAGTGTAAGCTGTGTAGTGCTACttttgtaactaaaaaaaaacttcttcaGCATCTAGAGAGCCATAGTGAGGTTAGTAATCTAGACAGTTTACAATTAAGCAGTGATATTGTTAAGCGTTGGTTTCCATATAAGAGAAATTTGCAAGTTATAAAAGCAATGATCTGTCAAGACAtccgagaaaaaaattttaaaaaatattatactattttaaatgatttttcctatGAAATATCCATTAGTGATACGGATTTAGAAGATTTGGAAGAAGAAACAGAAGCACCTGCCAACAAATATAAATGCGAATTGTGTGGAaaagattttttgtataaatatcaAGTGTTTGCTCATATGAGAGAGGATCATTTGAACGAAGACATTCCTTGGAAATGCAGCCATTGCAATCTGGAATTTATAtcaataaaaatgtatgaacaaCACAAACAAACTCACTGTCGGAATGAACATAAACTGTTGTTTTGCCCCAATTGCAATGGAAAGTTTGTCTGgcacaaaaatataaaagaacaCAAGTGTGTTTCGAAAATATTGGATATTGAAAGACCTCGAAAAGTTAAAATAATGAAGAGTTCATCGCGTAATGGTATCAGAAGATGTGGTCTTTGTGATATGACCTTTGAAAAACTGCGCGATTTGCGACAACACATGCCTTTGCACGCCGATGGCAAAACTGGAGTTGACTTCGATGGTTGCATTTATGTAAACCAATTTGAAACTTCATCCAGCAATCGCGAGCTGTTGGAACAGAagattaaaaatgcatttaaaaaatgtcaaataaGTCAACTGTATCAAGCCATCGATAAGTACGGCAAAGAAATGGATATTTCAGATTCGGATAGCGGTGAAGATGATGCTGAATGCAAAAAATGTTATTTGTGTGAACTTTGCAATGAAACGTTTAAAAAACGAAAACTTCTGTTTAAACATCAAAGTGAGCAACACAGGGATGTTTCAATGCCTTTCACATGCAAGGAATGTAAAATGCAATATGTTAGTATTCATTTGTTGCAACAACATATGAAAAGAGAATGTTGGAATGAACATCGACGAGTGTCTGAACAATGCGATTGTTGTAAAGAGCGTTTTATATGGCCGGATAACCTGCTGAGACATAGAGAAATACAGcgatacataaatattgaaaatttgcaaaCGGATAACGTGTGTCGTACCCAGGCACAGAAAACAATAATAGTTTCATCAATCTCCAAATCTGATGTGACAAGTGCCAATATCGAagtttgttattgtttcttatgTCCTAAAACTTTCGCCAATAATGATCAGTTCAATGATCATTTGATCCGTCATCGTCTCGCATCATCCGCCATCAAAATTGTTGCAAGCACAATACATTCTGTATGGTGGCCAAACGGGAGAAAGacaataaaatgcaaaatatgtaACCAAGTATTTTTAAGTAAGTCCGAATTAAATGAAcatttttcttctaaaaattcCCAAAACTTGTGTGGTGGAAGGCAACATTCAGTGGCAAACTACTCGATTACAAATCAAATGGGGTTTGAGTTACATTTAGAGCTGGATTCGGAAACGGAAACTGAAAGCATCGACAATGAAGAAAATGAAGAgatattgccatataaatgtTGCATGTGTAGTAAATCATTTAACcgaaaatatcaaataattcaACATCAAACCTTGGTGcacaattataaatttttggaaCTGAAATGCGAACGTTGCTTTTTTAGGACTGTATCACAGAAAGTTTTAGATTATCATAAAGTAAGTCAGTGttttaatgttgaaaaaatgtACCAATGCGATCAGTgtaatttcaaatttatgtggCAAGAGAACCTCGAGAAGCATATTTCGATATTTCATACTTCAGACGTTTTCGTCAAAGCACTGCATGCGGCTAATATAACGAGCAATACTAATGCTCAATGCCTTGAATCAAAAGAAGCTTCCCAGAATGATTTGTCGTCAGCATTACATCAAAACGATTCCGATGCAATGGACGGCATGCAATCTAAAGATAAATGTAAATGTATCATTTGTGGAATTTACATTACCAAAAGTAATTATTCAGAACATATTAAGAGACACAAATGTGACAAATCTTACAAATGCGATTTTTGCGAAATGGCCTTTATAACAAATACCTCATTAAAGAAGCATCAGGTCATGCATACAGGAGAACGTACTTTCAAATGTACATTATGCTCAAAATCGTTCAAGCGGCAAAAAGGTCTAACTATCCATAAACGTAAACATACCGAAAATCGACCATACAGATGCACaatttgttcaaaatcattTCTAAAATCGACACATCTGGCTCTTCATATGCGATACCATTCGAGTGAAAAGCCGACGCCAGACAAGAACTCGAATGCAATTGATTCTACCCAACTTGCACAAGGAGAGCGAAAGACAAACTTATGTCCTATTTGTGGTGTCTATTTGTCACACAAAACAAGTCTTAAAATACATATTAGAACCCATACGGGAGAGAGGCCATTCAAGTGCGATCTTTGTGATAAAAGCTGTACTACTAGTGTCCATTTAAATCTGCATCGACGCACACACTTTACTGAACGTCCTTTTAAGTGTACAATTTGCGAGAAATCTTTTGTACGTACAGCCGTATTAAAAGCACACATGCGCACTCACACTGGCGAACGTCCATATCAGTGCACTGTTTGTCAGCAAAGATTTATGAATTCAGGCACTTTAAAGGAGCATTCGCTTAATCATACTGGTAATAAACCTTTTATATGTGAGATTTGCAATCAATCCTTTAAATGTTCCTGGTATCTCAAAAAGCATCGTGTCAAAAGTGGCcatcatacagaaaatatttga
Protein Sequence
MKSSSPKTIIRCGLCDITFEKLRDLRQHMPLHADGKTGVDFDGCIYVNQFENLLRNRELLEQKIKNAFTKCQISQLYQAIDKYGKEMDISDSDSDEDDAECKKCYLCELCNETFKKRKLLFKHQSEQHRDVSMPFTCKECKMQYVSIHLLQQHMKRECWNEHRRVSEQCDCCKERFIWPDNLLRHREIQRYINNENLQTDNVCRSQAQKTIIASSISNSDVTSANIEVCYCFLCPKTFANHDQFNDHLIRHRLASSAIKIVASTIHSVWWPNGRKTIKCKICDQVLLRKAELNEHFSSKNSKNLCGGGQHSVANYSITNQMGFELHLELDSETETESIDNEENEEILPYKCCMCSKSFKRKYQITQHQTSMHNYELLELNCERCFFRTVSQKVLDYHKVSQCFNVEKMYQCDQCNFKFMWQENLEKHISIFHTSDVFVKALHAANRTSNTNAQCFESKEASQNDLSSALHQNDSDAMDGIQSKDKCKCIICGIYITKNNYSEHIKRHKCDKSYKCDLCEMAFITNNSLKKHQVVHTGERLFECTLCSKSFKYQRGLCVHKRKHTENRPHRCTICSKSFLKSNHLAIHMRYHSREKPTPDKNSNSIDSTQLAQGERKTNLCPICGVYLSHKTSLKVHIRSHTGERPFKCDLCDKSCTTSVHLNRHRRTHFTERPFKCTICEKSFVHTGVLKAHMRTHTGDPQGNHIDSLLKITKNMKNECFINGVQYKCRTCFDPGTTVFLLAEECSSSKTWQDLLNDIVKLKKNDDELLPKTICSKCLEKLISYYDFILHVQNVNEKYHQLLASGENSPQNGSLASSSQNTAELLAVSATALSIGQCVPDIKFEDELLIPYDIVLNNNNRRNDAVKEDTCDPFMETLEGDIGHALDTLKYEQRSQNEENRLLEDDINDYNSDNRSSSTSASEHDLHTSQPFEKKTEERFCKYFPIEKGNNNFMCGICNKSYTLDRNCRRHIITMHYQGNLYKCAFCDQHAQCKNYLIGHLQRKHPGESFESNATQLGRLFGERLYSKPLLLPRVECKLCSATFVTKKKLLQHLESHSEVSNLDSLQLSSDIVKRWFPYKRNLQVIKAMICQDIREKNFKKYYTILNDFSYEISISDTDLEDLEEETEAPANKYKCELCGKDFLYKYQVFAHMREDHLNEDIPWKCSHCNLEFISIKMYEQHKQTHCRNEHKLLFCPNCNGKFVWHKNIKEHKCVSKILDIERPRKVKIMKSSSRNGIRRCGLCDMTFEKLRDLRQHMPLHADGKTGVDFDGCIYVNQFETSSSNRELLEQKIKNAFKKCQISQLYQAIDKYGKEMDISDSDSGEDDAECKKCYLCELCNETFKKRKLLFKHQSEQHRDVSMPFTCKECKMQYVSIHLLQQHMKRECWNEHRRVSEQCDCCKERFIWPDNLLRHREIQRYINIENLQTDNVCRTQAQKTIIVSSISKSDVTSANIEVCYCFLCPKTFANNDQFNDHLIRHRLASSAIKIVASTIHSVWWPNGRKTIKCKICNQVFLSKSELNEHFSSKNSQNLCGGRQHSVANYSITNQMGFELHLELDSETETESIDNEENEEILPYKCCMCSKSFNRKYQIIQHQTLVHNYKFLELKCERCFFRTVSQKVLDYHKVSQCFNVEKMYQCDQCNFKFMWQENLEKHISIFHTSDVFVKALHAANITSNTNAQCLESKEASQNDLSSALHQNDSDAMDGMQSKDKCKCIICGIYITKSNYSEHIKRHKCDKSYKCDFCEMAFITNTSLKKHQVMHTGERTFKCTLCSKSFKRQKGLTIHKRKHTENRPYRCTICSKSFLKSTHLALHMRYHSSEKPTPDKNSNAIDSTQLAQGERKTNLCPICGVYLSHKTSLKIHIRTHTGERPFKCDLCDKSCTTSVHLNLHRRTHFTERPFKCTICEKSFVRTAVLKAHMRTHTGERPYQCTVCQQRFMNSGTLKEHSLNHTGNKPFICEICNQSFKCSWYLKKHRVKSGHHTENI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-