Basic Information

Gene Symbol
dnajc2
Assembly
GCA_949987645.1
Location
OX465276.1:107398407-107431738[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.035 1.4e+02 4.3 0.0 10 31 1011 1036 1008 1042 0.83
2 2 4.4e-11 1.7e-07 32.8 0.3 2 41 1141 1184 1140 1187 0.92

Sequence Information

Coding Sequence
atggcAGGTTTTTTAGAAATTGCTTGTGACTTTTTGATAGTGCCAAGAAAAGTGCAAAAAGTTGGTTATGcgtatttaaattcaaaaaacaatatatatgtTCATCACATGAATCGAAGGGATTCTGAAGAAAAGTTATTCGCAGATAATTTTGTGGTtgacataaaatatttaaaatctttGGATCCCAAAGAATGGAAAGACCAGGACCATTATGCTGTCTTGGGGTTGGGAAAGTTAAGGTTTAACGCTACTGATGACGATATTCGTCGTGCGTACCGGAAAATTGTTTTACAACATCATCCTGACAAACGCAAAGCAAAAGGAGAAGACGTTAAACCCGATGATGACTACTTTACTTGCATTACAAAAGCATACGAAACTCTagGATTGAGGCAGGACATTGCAGCTTGTGATGATCGCATTAAACGTGTTGAATCTACCACTGCTTCTAGAATTTCATCCCTTGAAACTGAGAATCATATACTCTATAAAAGAATTAACCGTGGTAACATTATTATAAGTGGACTGCCTGCTGGACTGAATGAtcttgttgctgctgttgttgcagTTGGTGCGTCGTTTAATATAGCTGTTAAAAGTCATGATATTAATAATgACATTATTGGTGATGCTTTGATTAATGGTGCCAATGTTAGCAATGCTGCTGCTAGTTCTTCTGGTGATATGGGTACAGCCAGGGTATATCTAAATGACCACTTTTCTCCAGCAGCTGGTAAATTGAATGCTGCTTGCAGAAAGTTGTACCAGGACAATTTggtgaaaaaatataaagtacATAATAACGATAAGTTACGAGCTGTCCTAACTTTGCCTGATGGGAATGAGGTTGTGGTGCATGATGCTGCTGACTGTGTTGCAATTCGTAATGTTACCAGCAGTGATTATTGGTCTAACATTTTACAATCTCAAAACCTTTTGAAAGTTGCCCACCTTAACTGTAATAGTCTTAGACCTTCATATAGATTGTCTAAGTTTGATGAAATTAGTAATATTATTAGTGGTTCAGGGTTTGATGTAATCGGGATTAGTGAAACTTGCCTTAAGGAAGAAGTTTCTTCACGTGCTGTTGATATTTCGAGTTATAAGTTCTATCGTAATGATCGGTTGCATTGTAGGGGTGGAGGTGTTGGTATCTATATATCtgataaaattaaacataaacttatttttaagaCTTCAATTCCGGGTAAATGTGAATCTCTCTGTCTTGAAGTTTACTATGGTAATAACGTGAGTTTATTGGGTGTAGTTTATTTGCCTCCTCCTGCTGACTTTGCTTCATTTGAAGAATTTCATTCCGAGATTCTTCTTAATTACGCGAATATTACTGTTGTAGGTGATTTCAATCTTAATTTATTTGATACTGAGAAATCTGCACTGGTTCACTCATTCTGTGCTAGGAACAATCTCTCCATCTGCCATAATTCTAAGCCTACACATTATGATGTCAGGCATTTGTCCACGTCTTTACTTGACTATTTTCTTGTTAGCGATCGGTCTTCTGTAAGTTTTTCTAGCCAGGTACAGTATCCGTCTATTTCTCATCATGCACTTATCGTCGCGGCTGTAAGGATTAATGTTGTATCTAGTGAGGGTATTGTTTCGCACCGTGATTTCAATAGAACTGACTGGGATGGGTTACTCTCGtatttaaatgagtttgatgTCTCATGTTTTTGGAATTCTGCAgatatttatgaaaaatgttCTATTTTAACTTCTCTTATTTTGAGATTATACTCTTTTGTACCGGTCAAGAGGTCAATTCGATTGAGTGATAATGATTGGATGAAATCGAATGACATTGTTTTGGCCAGATCACTTCGAGATATGGCTTTCACAACCTATTATTCGAACCCTACTACAGTTAACTGGAGAGTATTTTGTAAATATCGTAATAAAGCTAAATCTGTGATTCGTAGTGAAAAGAGAAAACATTTTGCCAAATTTTTTTCGGGATTAGATAATAGTGCTGTTTGGAAGGTACTTAAGGGTAGTGGTTGTTTAGCTTCGGCTGAAATGACGTATGAGGATGAGTTTCTGGATGCTCTTAACAGGGTCAAATCCCAATCAAGTGGAGTCGATGGAATTCCTATACGCTTCATTAATATGATATATCCTCTCATTTCTGATATAATTTTGAATCTGACAAACTCTATTTTAACATACTCTGAATTTCCTAGTGACTGGAAGACCGCACGTGCGGTACCTATAATATGGAGTGAAAAGAAAGGGGTGCCTGATTTTGGGGATGAAAACTCTGTTCTGGATGACGTTGACCGTTTTTATAGCTTTTGGTACGATTTCAAGTCTTGGCGGGAATTTAGTTACCTGGATGAAGAAGATAAGGAGAAAGGACAAGATCGCGATGAGAGAAGATGGatcgaaaaagaaaataaagctgcgcgaataaaaagaaaaaaggaggAGATGCTGCGCATTCGAGCTCTTGTAGACATGGCATATAACAATGACAAGCGAATACTCAAGTTTAAAAATGAAGAGAAAGAACGTAAATTAGCTGCGAAAAGAGCAAAGATGGATGCAGTGCAAGCGCAAAAAGCAGAATTGGAAAGAGTGGCTCGAGAAGCCCAATTAGCAAAAGAACGTGCTGAAAAAGTAGAACAAAAGCGGATAGAACAAATACGTATAGAAAAAGAACAATCAAAAAAAGCTTtgaagaaagaaagaaaacttTTTCGGGACAAAGCCAAGGAAAGTAAATATTTTGCCAACAATGATAAAGAAGCTTTGAAAAATATGGAAGgcgttgaaaaaatatgtgaaatATTTAGCCTTCTAGAACTTCAagacttaaataaaaaaatactggGGAAAGGTGCAAAGGATGTATTTAGTGCAGGTCTTAAAATGgcggaattaaaaattaaatctgacttgatcgaaataaataaactgcaaaataaaaacaaaactggTGTTGAAAAGTCTGAAGTAGTCGTAAAGGAAGTTAAAAAGAGTGATATTTGGTGTTGTGAAAAAGTCCAACTCTTGATTAAAGCTGTTAATTTGTTCCCGGCTGGTACATCTCAGCGTTGGGATGTAATTGCTTCTTTTATAAATCAACATTCATCTGGTGAAAATAGTGTTTCAGCACGGGATGTACTTAATAAAGCGAAAGCTTTACAAAGCAgcgacttttcaaaaagttCTTTAAAAACCCAAGCTAATGCAAGCGCATatgaaagttttgaaaaatcaaaaaaagatGTCATTGTATCCTCGGACATAACAGTTAATGCAGAAAGAGGAATTTCCGATTGCAATAGTGAGACCAAAGAAAATCATACAAATTCTAATATAGCAAACATTTCCAAAAATGCATCAACTTTAAATACAATCAAAGATTCAAAGTTAATTTCTACTACTTCTACGAAAAATTGGACAAAGGAAGAACAGGCCCTACTAGAACAAGCTATTAAGACATATCCAATATCTACGCCGGACCGCTGGGATCGTATTGCAGAATGTATAGCTAATAGATCAAAAAAAGATTGCCTTCGGAGGGTCAAGGAAATTGTCGAGTTAGTTAATTCAAAGAAAGAAGCTCAACAAGCAGTGAAATAA
Protein Sequence
MAGFLEIACDFLIVPRKVQKVGYAYLNSKNNIYVHHMNRRDSEEKLFADNFVVDIKYLKSLDPKEWKDQDHYAVLGLGKLRFNATDDDIRRAYRKIVLQHHPDKRKAKGEDVKPDDDYFTCITKAYETLGLRQDIAACDDRIKRVESTTASRISSLETENHILYKRINRGNIIISGLPAGLNDLVAAVVAVGASFNIAVKSHDINNDIIGDALINGANVSNAAASSSGDMGTARVYLNDHFSPAAGKLNAACRKLYQDNLVKKYKVHNNDKLRAVLTLPDGNEVVVHDAADCVAIRNVTSSDYWSNILQSQNLLKVAHLNCNSLRPSYRLSKFDEISNIISGSGFDVIGISETCLKEEVSSRAVDISSYKFYRNDRLHCRGGGVGIYISDKIKHKLIFKTSIPGKCESLCLEVYYGNNVSLLGVVYLPPPADFASFEEFHSEILLNYANITVVGDFNLNLFDTEKSALVHSFCARNNLSICHNSKPTHYDVRHLSTSLLDYFLVSDRSSVSFSSQVQYPSISHHALIVAAVRINVVSSEGIVSHRDFNRTDWDGLLSYLNEFDVSCFWNSADIYEKCSILTSLILRLYSFVPVKRSIRLSDNDWMKSNDIVLARSLRDMAFTTYYSNPTTVNWRVFCKYRNKAKSVIRSEKRKHFAKFFSGLDNSAVWKVLKGSGCLASAEMTYEDEFLDALNRVKSQSSGVDGIPIRFINMIYPLISDIILNLTNSILTYSEFPSDWKTARAVPIIWSEKKGVPDFGDENSVLDDVDRFYSFWYDFKSWREFSYLDEEDKEKGQDRDERRWIEKENKAARIKRKKEEMLRIRALVDMAYNNDKRILKFKNEEKERKLAAKRAKMDAVQAQKAELERVAREAQLAKERAEKVEQKRIEQIRIEKEQSKKALKKERKLFRDKAKESKYFANNDKEALKNMEGVEKICEIFSLLELQDLNKKILGKGAKDVFSAGLKMAELKIKSDLIEINKLQNKNKTGVEKSEVVVKEVKKSDIWCCEKVQLLIKAVNLFPAGTSQRWDVIASFINQHSSGENSVSARDVLNKAKALQSSDFSKSSLKTQANASAYESFEKSKKDVIVSSDITVNAERGISDCNSETKENHTNSNIANISKNASTLNTIKDSKLISTTSTKNWTKEEQALLEQAIKTYPISTPDRWDRIAECIANRSKKDCLRRVKEIVELVNSKKEAQQAVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-