Basic Information

Insect: Tachina grossa
Gene Symbol: -
Assembly: GCA_949987645.1
Location: OX465276.1:39795725-39797584[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 1.8e-07 0.00041 21.5 0.0 8 39 399 430 397 434 0.87

2 4 3.8e-14 8.7e-11 42.9 0.0 5 44 450 489 448 490 0.93

3 4 0.028 62 4.9 0.0 27 38 519 530 515 536 0.88

4 4 1.7e-14 3.8e-11 44.1 0.1 4 41 558 595 558 597 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	1.8e-07	0.00041	21.5	0.0	8	39	399	430	397	434	0.87
2	4	3.8e-14	8.7e-11	42.9	0.0	5	44	450	489	448	490	0.93
3	4	0.028	62	4.9	0.0	27	38	519	530	515	536	0.88
4	4	1.7e-14	3.8e-11	44.1	0.1	4	41	558	595	558	597	0.92

Sequence Information

Coding Sequence: ATGAATCATTTGAAGTGGATGGGCCATTCGGCCACAATTTTAGATATACATAAAAATCTACGAGCAGATTTGAAAAGCTGTGAGGTTACGTTGGTGGCCAAGGGGCACTGCGTTAAAGCGCATCGCTTCGTTTTATCATCTTGTAGTGACTTGCTACGTTGTCTTCTAACTGATGTTCCCACGGGGCAGGAGTGTTGCCTTATGATTCCCGATATTAAGGGACATTTGCTGGACAATGTTCTAGCCTTTATATATTTAGGAGAGTGTTCTTTATCCTCTACTAATTTGTCAGAGTTCTTAGAAGCCATTAATGTGTTGGGCATTAAAAGTGCCATAAGTTTTGAGTGCAATACAAATGCATTGCAAACAGCTCAAAGTAGCAGTCATAACACCATCGCTCTAGATAGCGACACAACTATGGAGACAGTAGGTAACACATTGGCTAACGCGCATTTAACGGTTGAAGCATCGAGTGATTCATTGCATCAGGGAGAAATAATTGAAACCCAAAATGTAATTCATAACGAGACCCATACTACAACTACGAGCAGCGAAAATAATTCTGGCGGAACTAGAGAACTTGATTTCTTAGATGTATATCATGAACCTCAACATAAAATAACATATTCAATAGAACACGTTCCAGGTTCTGCGAGTggtaatgaatttattttaacagaAAACTCGGGCACTTTCACTCTTACACATAGTGGTAAATTGGAACCTACAACATCTCCGGCGGAATCATCTAACATGGAGGTTACTGAGGATGAAGGTTGTGAATCACATATTATAGAAGAATACAGCAGTGGCGATGAACCGTTAATCCAAATTAGTGAAACCGAACAGGATCAGCAAAGTGTAACAGTTACTCAGTCAATAACacaacaacatcagcaacaGCATACAACACCTCTAGTTGTAGCATCACCTACTGCAACTTCTATTATACAAGTaaagccaaaattaaaaacgcTTAAGTTAAAACATCCACAGGGAACTCAAAGAATAATAGCAAAAATGGAACAACTCTCTGAAGATGGAACAAGCGATGATCCCATATCATTATTACAAACATCAAATGAAAGTTTTACCCTTCTTAAAGATGCCTCCATATTATCAACAAGTAACAATAGCCATGACGAGTCAGCCGATTTTTCAATGAACAACTCTGACACATCTGCAACCGAGTTGGCCTATCAAGCCATGATAAATGAGGGCATGTCTTTGCCGAAGGCTGCCGATAAATTTAATGTTTCGAAAGCTGAACTGTGGCGAAGAGTTCGTAGTACAGGAGTTGAGCAGCTCAACAATTCAGCAAAAATAGATGCTGATAAGATTGATGTTTTAGAATTAGCTAGTAAGGCTGTAATTAACGAGGGTTTATCATTACAGAAGGCCGCCATACGTTACGACATTTCTAAAACAGTGCTGTGGCGTAGAGTTCGCAAACATCCCCAGTATATGAAAACAGCACGTGAAAATCCTGTTATAACTAAAGCATATGAACGATTGAAATCTGGAGAATCGCTTAAAAGCATATCGCAAGATTTAGATATACCCATGTCTACATTGCACCGGCATAAAGTGCGTCTTTCTCAAACTGGTCAATTACCTGACTTTGTTACGTGCAAGAAACGTGATAGCATGTCAAAAGATGATCTTAAAGTAAAATTATCTAAAGCAGTTCATGCCTGCGTGCATGAAGGAATGTCGCAAAATCATGCTGCTATTATATTTCAAATTTCGAAAAGCACATTATGGCGCCATCTGCAGAAACGAGTAGCGGAAGCCGAAGCTGCCGAGAACGAATCTCTGGGCGATGAAGATGAAATTAAACAAGAAGTTATTCTCTCATAA
Protein Sequence: MNHLKWMGHSATILDIHKNLRADLKSCEVTLVAKGHCVKAHRFVLSSCSDLLRCLLTDVPTGQECCLMIPDIKGHLLDNVLAFIYLGECSLSSTNLSEFLEAINVLGIKSAISFECNTNALQTAQSSSHNTIALDSDTTMETVGNTLANAHLTVEASSDSLHQGEIIETQNVIHNETHTTTTSSENNSGGTRELDFLDVYHEPQHKITYSIEHVPGSASGNEFILTENSGTFTLTHSGKLEPTTSPAESSNMEVTEDEGCESHIIEEYSSGDEPLIQISETEQDQQSVTVTQSITQQHQQQHTTPLVVASPTATSIIQVKPKLKTLKLKHPQGTQRIIAKMEQLSEDGTSDDPISLLQTSNESFTLLKDASILSTSNNSHDESADFSMNNSDTSATELAYQAMINEGMSLPKAADKFNVSKAELWRRVRSTGVEQLNNSAKIDADKIDVLELASKAVINEGLSLQKAAIRYDISKTVLWRRVRKHPQYMKTARENPVITKAYERLKSGESLKSISQDLDIPMSTLHRHKVRLSQTGQLPDFVTCKKRDSMSKDDLKVKLSKAVHACVHEGMSQNHAAIIFQISKSTLWRHLQKRVAEAEAAENESLGDEDEIKQEVILS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00199788;
90% Identity: iTF_01397341;
80% Identity: iTF_01398653;