Basic Information

Gene Symbol
onecut
Assembly
GCA_949987645.1
Location
OX465279.1:3585427-3603694[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-37 3.1e-33 115.2 0.4 2 78 795 871 794 872 0.97

Sequence Information

Coding Sequence
ATGCTCAATCACTTGTCAAATTCGAATGGGACGTTGAGCATGGAGTCAATTAGTGAAATAATTGACCATCAGACACTAAGTCGGCAGCTGGTTGAAGATACTACTGATCTGATGGTGCAGCATACATTAGTAGCCCGCACACCGTCGCCGGGTTCGTCAGTAACTGCACTCTCAGCTCATGATGGAGTAATGAATGAGCATGAAATGGCCACCTCGTCCAGTGTTGTTTTAAACTCAGACTCTGGGGAAAATAGCAATATGACGATAGTTCACACAATAATGGCTCGTAATAGTCCTACTTATCAGACACAACGGCTACATAATCAGCAACATCAGCGGGAACACCATGTACAGCATCACCAACATTTGAATTTGCCACAACGTTTACAACTGGAAAGTCCTGTTCACTTTGTGGCAGCTGATAACACATTAGACGCATTGTCTGTAGGTTCGAACTGTTCAAATACAATGGGACATATCATTACCGTAGAGCAGGAACATAAGTTAGTGATAGTCAATGGCAATAGTAATGgtagcagcagcaacaacaaaatcaaccacaataataacaataataataacagtagtaataataataatctatgTAGCAATCATAAGAACAATAATATCAGTATCAGCGACcacaataaaaacaattgtGACTTGGGTATTGTTTTGGATGAATTAACGACCGATGATCACACAACAATGGATTCTACTGATCAGCCTAACTATGAATTACATGACGGGTTAAGAGAATCTGAATCTCACCACACGTTCAACCACATGCATTATCATAACCACCATCAGCATCAACAACGTTGTCGTCCCAACCTACACGATCATTCATCTCTTCAATCAGCTCAAACTGAGCCTCTAACAGTAATTGTTCAAACTCAAGAGGACTCTCGGGATTCTGCTACACAAATATTAAGTCCTCCAGAGCTGAGTGTGGTGGGTGTAGGTGAAAATTCCTTGGGAACCAGTTCCTATCAAACACTAACCTCTGTAGTAAACGATGAGCCGTTGTCTCCGCCTGGTTTTAGCCCCACATCCGCATATGCAACACTGACGCCTCTACAACCATTGCCGCCCATTTCAACAATGTCAGAAAAATTTGCGTATGGTGGTCATATCAGTGGAGGAAGTGTCATCAGTAGTTCCAGTACAAACGATGCAGCTAGTCATGATGGAGGCAATGTCAATAGTAATTCTAGTAGATCAACAGGAGTAGTTGGGCCTTATGTGGTGATGCCAACTGCCCAGCATAACCATAATCAACACCAAAACTCCCAACAGCACAACTCTCATCAGCATCACTCGAACCCGTTAAGCTCACTTAGCTTAAGTTCTCTAAGTGGAGGCGAGCAGTCACCATATTCGTCATATGATAAACTGCCTACTATGGGTATGTCAATGACTCCACCGCATAACTACGGCAGTTCTCCATCACATACTCTTTCTGGACTTGTAGTTTCCTGCGCTTCTCCTGGTGGTTGCGGACCCCTTTCACCTCAATCACCATACAGTCACTCAACAAGTCTACAATCACCAAAACCttcacaaacaaatttattacacTGTAAAGACTCCTCCAATACGAAGCCGAACTCTACATCAATCGACACTAACTCAGGCATTACTGGATCTGCTGCCCAACAACGTCATGTCGTCTGTCTCTCTTCTGTTAATATAAGTAGTAACAGTGTTGTAGGAGATCATGTCATTGTAACGGATTACGACTCATCTTATAAATCTCAACAAAGGGACTTGATTATCTCAACTACACCATCTACCTCATCAGCATCCAATATTGGCGGTCGAAATGGCTCTCATCTGCATCTACAACCTTCAAGTCCTGGTGCTCTCAGTCCACACTCAGTATCAGCTAGTTCTATGAACTCTCCAGGTACAGTCATAACATTACAAAACATGAACATTAACTCTAGTAAAACCTTAGTCCACATTTCGCCACTGCAAGAAAACCAGCAGCAGCACGTAGTATCGCTTACTCCCTCACCACCTATCCAAAACATTGGCTTAAATGAAGTGCCTCAAACTCTTCTTGTAACTGCAAGTCATAACCATGATGacacaaatatattaaatagtAGGAAATTGATGATAAATGGCAGCCTAGACACACAGTTTTTAATACAGGGATCACAACAACAGCACCATATAGACTCAAAATCACACCCCATTACAAGTGAATGTTCAAATAATGGAACTCAGCAAACACAACTTGCTATTCAAgctcaacaacaacatcagcaggCCATTCATAATCAACAAATTCAGAACGAAACTCAACCCCGTAATAAACATTCCGTCAGTAATTCCAACGTCAGCTCACATACCACCAACACGACTTGTGGAGACATGGAGGAAATTAATACAAAAGAACTGGCTCAACGTATTTCAGCAGAGCTGAAGCGCTACAGCATACCTCAAGCAATATTCGCTCAACGGGTATTGTGCCGTTCTCAAGGCACATTATCCGATCTTTTGCGAAACCCAAAACCTTGGTCAAAACTCAAATCAGGCCGAGAAACATTTCGGCGAATGTTTAAATGGCTGCAAGAGCCTGAATTTCAACGCATGTCTGCCCTTCGTATGGCAGCCGCTCAGTTGCCGCAACGCAGCTCATGCACAACCAGTAGCAATAGTTCAATTAATAATCACATAGTTAATAATAGTACACACGaagattttgATTTGGATTTTACAGGTCCGACTAGTTTAGTAAGCTCATCGCCAGGAACAGTATCAACAGGGCCGGTTGTGACTGCTGGTGGCTCATGTCATCGAAAAGATGAACTACAAATGGAACACATGCCTCAACCCAAAAAGCCTCGGCTGGTATTTACCGATCTTCAAAGGCGCACCTTGCAAGCAATCTTTAAGGAAACTAAAAGGCCTTCAAAAGAAATGCAAGTAACTATTGCACGACAACTTGGATTGGAACCAACAACTGTGGGTAACTTTTTTATGAACGCGCGACGTCGTTCAATGGATAAGTGGCGGGATGATGATGGAAACAGTAGTACTTCGGAGCAAATGAGCAACAAAAACTCATCATATCAATCGATTTCTGGTAGCAGTCATCATAACCACAGTGTTCAAACTCACTCAGAGCATCAAAGTAGTTCAAACAGCAGTCAATTCATAAATAATAGCTGCAACAACATTGGTAATATGCATATACAACCATCTTCTTTGCAGCAACATCATCATCAACATCACCACCATTCATCTTCGCTTGAATTAGATGATGATGGAGATATGGACTTGGACTTGGTCCACGATGATTTTGAAATGAGCGACAGCAATATCGATGATAGTCAGCACCAAAAAGATGACGATATGTTGTGA
Protein Sequence
MLNHLSNSNGTLSMESISEIIDHQTLSRQLVEDTTDLMVQHTLVARTPSPGSSVTALSAHDGVMNEHEMATSSSVVLNSDSGENSNMTIVHTIMARNSPTYQTQRLHNQQHQREHHVQHHQHLNLPQRLQLESPVHFVAADNTLDALSVGSNCSNTMGHIITVEQEHKLVIVNGNSNGSSSNNKINHNNNNNNNSSNNNNLCSNHKNNNISISDHNKNNCDLGIVLDELTTDDHTTMDSTDQPNYELHDGLRESESHHTFNHMHYHNHHQHQQRCRPNLHDHSSLQSAQTEPLTVIVQTQEDSRDSATQILSPPELSVVGVGENSLGTSSYQTLTSVVNDEPLSPPGFSPTSAYATLTPLQPLPPISTMSEKFAYGGHISGGSVISSSSTNDAASHDGGNVNSNSSRSTGVVGPYVVMPTAQHNHNQHQNSQQHNSHQHHSNPLSSLSLSSLSGGEQSPYSSYDKLPTMGMSMTPPHNYGSSPSHTLSGLVVSCASPGGCGPLSPQSPYSHSTSLQSPKPSQTNLLHCKDSSNTKPNSTSIDTNSGITGSAAQQRHVVCLSSVNISSNSVVGDHVIVTDYDSSYKSQQRDLIISTTPSTSSASNIGGRNGSHLHLQPSSPGALSPHSVSASSMNSPGTVITLQNMNINSSKTLVHISPLQENQQQHVVSLTPSPPIQNIGLNEVPQTLLVTASHNHDDTNILNSRKLMINGSLDTQFLIQGSQQQHHIDSKSHPITSECSNNGTQQTQLAIQAQQQHQQAIHNQQIQNETQPRNKHSVSNSNVSSHTTNTTCGDMEEINTKELAQRISAELKRYSIPQAIFAQRVLCRSQGTLSDLLRNPKPWSKLKSGRETFRRMFKWLQEPEFQRMSALRMAAAQLPQRSSCTTSSNSSINNHIVNNSTHEDFDLDFTGPTSLVSSSPGTVSTGPVVTAGGSCHRKDELQMEHMPQPKKPRLVFTDLQRRTLQAIFKETKRPSKEMQVTIARQLGLEPTTVGNFFMNARRRSMDKWRDDDGNSSTSEQMSNKNSSYQSISGSSHHNHSVQTHSEHQSSSNSSQFINNSCNNIGNMHIQPSSLQQHHHQHHHHSSSLELDDDGDMDLDLVHDDFEMSDSNIDDSQHQKDDDML

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01399361;
90% Identity
iTF_01399361;
80% Identity
iTF_01398388;