Basic Information

Gene Symbol
Ubp1
Assembly
GCA_949987645.1
Location
OX465278.1:16271344-16307726[+]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2 5.3e+04 -5.3 6.7 8 140 17 68 9 128 0.52
2 3 5.1e-54 1.4e-49 170.0 0.2 15 186 395 563 382 575 0.91
3 3 2e-14 5.5e-10 40.5 0.4 184 222 598 636 587 637 0.92

Sequence Information

Coding Sequence
ATGGCTCTATCGCTGGTCGCTACCCTTCCAcatcatcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcaacatcaCCATCAGTCTAGTTATTCCGACTTACAATCTCTATTAGATCCTTACACATTGGAATATCAAGCAGAAGGACCAACATATCCAAATTTTTTGAATCAATCAACCAATCAACAAAACTATCAGCAGCAGCAACaccagcaacagcaacagcaacagcagcagcatcaGCACCAACGTCCAACAAAAATCTGTTTAACAAATTTTCACGACACAGATTTGATGGAGTTTGACAATAACAATAACGGCCATAATTCAAATAACATACAGCCAACAACATTGCAGCATAATAATCAGATTACAACAAATATTTCACAGCTTTCTAATTCAACAAATCGAAATTTAATAAGTGGTTTCCATCATCAACATTTTGGACCAGAATATGAACCAGTAATTACTTTTGTCGATTCTCCACCGAATTCCGAAGAGTCTTGGCAGGACGATCAATCGAAAGGTTCGCCAGGCCCACAAATAATTGACGTCCAAACCATATACCTAAATAGTAGTTCCCGTAAAAGACGAATGGAGTGGGATCCATTGGATATAGGTCAGAGTGAAAACACTGCCTCAACACAAACTGTCGAATTACCagcaaaaatatcaacaaatcaATTAACTGAAAAGGACAAATATAAAAAGGAACGATTAAACAGTGgtcGTGGCACATGGGGTGACGATATTGGATTTGATTTAAATACCGAGTTCAACAGTAACTCCTATTTAAATAAtgaatcgtTTATGAGTTTTGCATCGGGATTACCTGGTGCTCTCAAGCAAGAACCCCAAACGGACcaattgaaaattaataaaaactcaTTAAATCTTCAGCAAGATTCAGGTAATCTTAATATTCcgacaaaaaatgataaaccACCGGCCACAGCAGCGGGAGCAACAGGTAGTCACATTAAGACATCATCGgaaaaacttaacaaaacaGATTTAATTGAAAGCAGTGGCATTTTGGATCAAAATTCAAATGCCAACAagtcaaataatttaaataatgatCAGGcAAGCAACTCTGATGTCCCCCATCAACTTTTGACTGTAGTTGATGCAAGTAAAATTGAACAAATACCAGCAGGACGTGATGCAACTGCCGCAAGTGCAACAACTTCCAACTCAGATGATTACAAatttcaatatattttagcTGCAGCCACATCAATTGCAACTAAAAACAATGAAGACACACTCACCTATTTAAATCAGGGACAAagttatgaaataaaattgaagaaaatcggtgACTTATCACTGTATAgggataaaattttaaagAGCGTAATCAAAATATGCTTCCACGAGCGTCGTCTACAATATATGGAACGTGAACAAATGCAACAATGGCAAGCTTCGCGTCCCGGTGAGCGTATAATCGAAGTTGATTTGCCCTTATCTTATGGTCTGTGTAACGTTTCGCAGCCACTAAATCCGAATTATTTAAATACCGTAGAACTACTATGGGATCCCATGAAAGAGGTGGGAGTTTATATTAAAGTCAATTGCATATCAACGGAATTTACACCTAAAAAACATGGTGGCGAAAAGGGTGTTCCATTTAGATTACAAATTGAAACGTATATTGAGAGTTCGAACAGTGTCAACAGTAATAACAATAATGCGGTATCAACTGGCACCAAGTCACCTCTAACAGCTTCACCGCCACAGTTGACATCCAATAATTCAATGGTGGGTTTTGCAGCAGTCACTAAGCAACCCATACATGCAGCGGCTTGTCAAATCAAggtTTTCAAATTAAAAGGCGCTGATCGCAAACACAAACAAGacagagaaaaaattcaaaaacgtCCACAATCGGAACAAGACAAATTTCAACCCAGCTACGAGTGTACAATTATGACAGATATACCACTGGATGTGATAGCGACAACTAATAGTCAAAATTCCAATGGTTGCTTTAGCCCGGAATATATGAAAATTTGGCCAAATTCTCCTGTACATATGCCAAAATATGATGGTATTTTACCATTCACTAGTGCCTCACCAAATGCCAATACTAGTCCTATAGCTATAAATAGTGTCTCCTCAACAAATTCAACAAGTCTTAAAATAATGGATCCAAATAATATGGTTAACACGCCATCAATGGTGAATGATGTTGATGAATATAGTTCAATTACAATAATGCCGGATTCCACACCAACGCAAGTAACTCAGTGGTTGACATTTCATCGTTTAACATCTTATTTATCAACATTTTCCCATTTTTCTGGAGCCGATATTATGAgAATGTCAAAAGAAGATTTAATACAAATCTGTGGTCTTGCCGATGGCATAcgaatgtttaatattttaagagCCAAAGCCATAACGCCACGTCTAACACTCTACGTTAGTTTAGATGGCGCTAATTATAATGCCATATATCTTATCTCTAATACATCTAAAGaactattacaaaaaatatttaagcttcCCGGTTTTTATGAAATAGTTGCCAAAAGCTCCACACAGAATGGCAGCGCCTCTGCAATTGGCAGTggtaagaacaacaacaacaccatgATAGACAATTCCTCACCGTTTCATAGTTGGGGCATGCATTCCAAATATTCCGGCAGCGGCTCGAATATTTTCAGTGAAGTGAATagcaaaagtttaatatatGTTACCGGTCCAGGTGGCATACATGTGGCCATTACCGACGAGGTATTAAACAATGAAATGCGTGATGGTAGTTTATATGGCCTAGAAGTACAAAGTGGAAAagtaattatgaaattaattaataaaaatgaaaattag
Protein Sequence
MALSLVATLPHHQQQQQQQQQQQQQQQQQHHHQSSYSDLQSLLDPYTLEYQAEGPTYPNFLNQSTNQQNYQQQQHQQQQQQQQQHQHQRPTKICLTNFHDTDLMEFDNNNNGHNSNNIQPTTLQHNNQITTNISQLSNSTNRNLISGFHHQHFGPEYEPVITFVDSPPNSEESWQDDQSKGSPGPQIIDVQTIYLNSSSRKRRMEWDPLDIGQSENTASTQTVELPAKISTNQLTEKDKYKKERLNSGRGTWGDDIGFDLNTEFNSNSYLNNESFMSFASGLPGALKQEPQTDQLKINKNSLNLQQDSGNLNIPTKNDKPPATAAGATGSHIKTSSEKLNKTDLIESSGILDQNSNANKSNNLNNDQASNSDVPHQLLTVVDASKIEQIPAGRDATAASATTSNSDDYKFQYILAAATSIATKNNEDTLTYLNQGQSYEIKLKKIGDLSLYRDKILKSVIKICFHERRLQYMEREQMQQWQASRPGERIIEVDLPLSYGLCNVSQPLNPNYLNTVELLWDPMKEVGVYIKVNCISTEFTPKKHGGEKGVPFRLQIETYIESSNSVNSNNNNAVSTGTKSPLTASPPQLTSNNSMVGFAAVTKQPIHAAACQIKVFKLKGADRKHKQDREKIQKRPQSEQDKFQPSYECTIMTDIPLDVIATTNSQNSNGCFSPEYMKIWPNSPVHMPKYDGILPFTSASPNANTSPIAINSVSSTNSTSLKIMDPNNMVNTPSMVNDVDEYSSITIMPDSTPTQVTQWLTFHRLTSYLSTFSHFSGADIMRMSKEDLIQICGLADGIRMFNILRAKAITPRLTLYVSLDGANYNAIYLISNTSKELLQKIFKLPGFYEIVAKSSTQNGSASAIGSGKNNNNTMIDNSSPFHSWGMHSKYSGSGSNIFSEVNSKSLIYVTGPGGIHVAITDEVLNNEMRDGSLYGLEVQSGKVIMKLINKNEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01137739;
90% Identity
iTF_01074207;
80% Identity
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