Basic Information

Gene Symbol
grh
Assembly
GCA_949987645.1
Location
OX465278.1:2067442-2155266[-]

Transcription Factor Domain

TF Family
CP2
Domain
CP2 domain
PFAM
PF04516
TF Group
Beta-Scaffold Factors
Description
This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.056 1.5e+03 -0.2 0.9 89 115 133 159 111 198 0.60
2 3 0.19 5.2e+03 -2.0 0.4 91 112 265 286 246 308 0.62
3 3 2.3e-63 6.3e-59 200.5 0.3 24 221 614 806 600 808 0.94

Sequence Information

Coding Sequence
ATGGTAAATAATCCCGACTCGCGCTACAAACGCCGTACCGTTTTAACAAATGGCGATTCCCTAAACTCCGGCTCTACGTCACCAACTCCTTCGATCCCAACATCGCAAGCGCAACCCTTAGCGATGTCGTCAACGCATCATCAGGGTAGTCCGCATGATGTTATAATACAGCAGCATAACGGCAATTCGTATCAGCTGCCTGCATCATCGGTGCCATCGCGCTACTTTGACCATCCCCAACTGACCACAGTTGTCTCAGCGGCCACGTCACAAACTCTGCTCAGTCTATCACCGAATGGTGGCGCCACACATCCACATAGTCACCAGCATGCGGACGATGCGACGAATGGCAGCGGTGGCATGCAACAACAGTCACTTCACCAACACCACCAGCAACAAAatcagcagcaacagcaacaacaacaacaacagcaacatcaGCAGCATCACCAGCACCAGCAACATCAATTGATTGAAGCTGCTGCTACAACAGTCAATTTAAGTGCTTTGGGCACGCCGCAGCTGCATCAGGTTCAAACTTCGAACGGCACAACGTCATTCGTTTACGAATATTACAAAATGCCCGAAAAGGATGTTGCATCGACTGAGGCAGAACTTCACTGGAGTGCTTCCAGTGCAAAGCTGAATGGCCAAACCACACCTCTTGATGTATCGAGCCTATCGCAAAACGAGATACAAGGCTTATTGCTTGGCTCACACCCATCAGCAACATCGGCGGCAGTGGCAGCCGCTGCCGCAAATGTCACCACAGCAGCAGCTTTGgcacaacagcaacaacaacaacaacaacagcagcagcagcaacaacatcagcagcaacaacaacaacaatcaaCTATAGTTAGCGCAACTGGTGGCGGTTCAGGTACAGTGGTTATAACAGCTGATCACCATCGCCAACAAGCCGCCGCGACCACAATAAACATTAAAAGGGAACCGGAAGACTTGCGAAAAGATCCTAAAAACGGTACCGCTAGTAATGGCTCATCAGCCAGTAGCGGACAGAAGGTTATTGTATTACAACAATCACCCTCGCCCACACAAATTCATATCAAAGAGCCGCCGCTTAGTCCTGGAAGCCCAACAAATCATACAGAAGCCATGTACGCTGCCGGCGGTGGCACTCAAATTTATCTGCAGGGGCCTCATCAAAACTCAGCGCCCGGACCTGGTGGCAATGTGAACACACAAACACCCAGCCCTGGTCCATATATTGGTTCGGATGGGTATGGCATGTACACAGCCAGTCGCCTGACAACAGCCCCAACTACCACATTCATTTCGGAACCGTACTATCGTGAATACTTTACAACAACAGATGGCCAAGGTTACGCACCGACCCGCACTATATACGGCGACGGTGAAGGCCCTCAGCCCGGCACCACTTACGAAGGACGTTTTACCACAACAACTGCCAACAGCGGTGTACCACCTCCCCATCCGTCAGCGAATGTGTCCAAGAACAACGGCGGCACTCCTATCTATGCCAAAACGGTGACAGCAGCAGGCCTAACAGTCGACTTACCCAGCCCAGATTCCGGCATTGGAGCTGATGCTATAACGCCCCGAGATCAAAATAATATTCAACAGTCTTTCGATTATACGGAGCTCTGTCAGCCGGGTTCATTGCTGGACAATAATGGTGGCATACCCGTCTCTGTGAATAGCATACAACGCGGCGTTGTCAGCGTCCATGGCGGCCAAAATAGTCCGACAACATCGTTAGGCGGCACCAGTGCTAATGGAAGCGCTACACGTTCAAGGCCATGGCACGACTTTGGGCGACAAAATGATGCTGATAAaatacaaataccaaaaatATTTACAAATGTTGGTTTCAAATATCATCTGGAGTCGCCAATAAGTTCATCCCAAAGACGAGAAGATGATCGAATAACGTATATTAACAAAGGACAATTTTATGGAATCACCTTGGAGTATATACCCGATCCCGATAAGCCCATTAAAAATACAACCGTTAAGagtGTGATTATGTTAATGTTCCGCGAAGAAAAATCCCCCGAAGATGAAATTAAGGCGTGGCAATTTTGGCACAGTCGACAACATTCGGTCAAGCAACGAATCTTAGATGCAGATACCAAGAATTCTGTAGGTCTAGTTGGCTGCATCGAAGAAGTCTCCCACAATGCCATAGCAGTTTATTGGAATCCCTTAGAGAGCTCAGCAAAGATAAATATCGCCGTGCAATGTTTAAGTACAGACTTTAGCAGTCAGAAAGGTGTGAAGGGTTTACCTCTACATGTGCAGATCGACACATTCGAAGATCCGCGTGATGCTCAAGTCTTCCATCGAGGCTATTGTCAAATTAAAGTTTTCTGCGATAAGggtGCCGAACGTAAGACTCGTGATGAGGAACGTCGCGCTGCCAAACGTAAAATGACTGCTACGGGACGTAAAAAATTAGATGAACTTTATCATCCGGTTACAGATCGTTCTGAATTTTATACAATGCAGGATCTTACCAAGCCGCCGGTACTATTTTCACCAGCCGACGATTTGGATAAGGGCTTCTATGGCCATGAGTCTGATGGAGCCCCAGACTTAAAAGGTGCCTCGCCCTTTCTCTTACACGGACAAAAGGTAGCAACGCCAACATTGAAATTTCACAATCACTTTCCGCCCGACATGCAGACTGACAAAAAAGATCACATCTTAGAACAAAGTTTAGCTATGGGTGAATTCGGTCCTCCTTTAAAACGTGGTCGCATGACACCACCCACCAGCGAACGTGTCATGTTGTATGTGAGACAAGAAAATGAAGACGTATACACACCCCTGCATGTTGTGCCGCCCACCACTATCGGCCTTTTGAATGCGattgaaaataaatataaaatatcgaCAACGagtataaataatatttatcgaacAAATAAAAAGGGGATTACGGCGAAAATTGATGACGATATGATTTCATATTATTGCAACGAAGACATTTTCCTTTTAGAGGTGCAGCAGCTGGAAGAGGAGTTGTACGATATTACGTTAACGGAATTGCCAAATCACTGA
Protein Sequence
MVNNPDSRYKRRTVLTNGDSLNSGSTSPTPSIPTSQAQPLAMSSTHHQGSPHDVIIQQHNGNSYQLPASSVPSRYFDHPQLTTVVSAATSQTLLSLSPNGGATHPHSHQHADDATNGSGGMQQQSLHQHHQQQNQQQQQQQQQQQHQQHHQHQQHQLIEAAATTVNLSALGTPQLHQVQTSNGTTSFVYEYYKMPEKDVASTEAELHWSASSAKLNGQTTPLDVSSLSQNEIQGLLLGSHPSATSAAVAAAAANVTTAAALAQQQQQQQQQQQQQQHQQQQQQQSTIVSATGGGSGTVVITADHHRQQAAATTINIKREPEDLRKDPKNGTASNGSSASSGQKVIVLQQSPSPTQIHIKEPPLSPGSPTNHTEAMYAAGGGTQIYLQGPHQNSAPGPGGNVNTQTPSPGPYIGSDGYGMYTASRLTTAPTTTFISEPYYREYFTTTDGQGYAPTRTIYGDGEGPQPGTTYEGRFTTTTANSGVPPPHPSANVSKNNGGTPIYAKTVTAAGLTVDLPSPDSGIGADAITPRDQNNIQQSFDYTELCQPGSLLDNNGGIPVSVNSIQRGVVSVHGGQNSPTTSLGGTSANGSATRSRPWHDFGRQNDADKIQIPKIFTNVGFKYHLESPISSSQRREDDRITYINKGQFYGITLEYIPDPDKPIKNTTVKSVIMLMFREEKSPEDEIKAWQFWHSRQHSVKQRILDADTKNSVGLVGCIEEVSHNAIAVYWNPLESSAKINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDAQVFHRGYCQIKVFCDKGAERKTRDEERRAAKRKMTATGRKKLDELYHPVTDRSEFYTMQDLTKPPVLFSPADDLDKGFYGHESDGAPDLKGASPFLLHGQKVATPTLKFHNHFPPDMQTDKKDHILEQSLAMGEFGPPLKRGRMTPPTSERVMLYVRQENEDVYTPLHVVPPTTIGLLNAIENKYKISTTSINNIYRTNKKGITAKIDDDMISYYCNEDIFLLEVQQLEEELYDITLTELPNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00997477;
90% Identity
iTF_01260759;
80% Identity
-