Basic Information

Insect: Tachina fera
Gene Symbol: -
Assembly: GCA_905220375.1
Location: LR999963.1:51593122-51610482[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.17 20 7.3 0.4 1 23 1690 1713 1690 1713 0.94

2 12 9.8 1.1e+03 1.7 0.9 1 23 1872 1894 1872 1894 0.93

3 12 0.00088 0.1 14.4 2.8 2 23 1897 1918 1897 1918 0.97

4 12 4.3e-05 0.0049 18.6 0.2 3 23 1926 1946 1924 1946 0.98

5 12 8.7e-06 0.001 20.8 5.8 2 23 1953 1974 1952 1974 0.97

6 12 9.9 1.1e+03 1.7 0.1 5 23 1987 2005 1986 2005 0.96

7 12 0.049 5.6 9.0 0.1 2 23 2044 2064 2043 2064 0.95

8 12 0.00028 0.032 16.0 0.3 1 19 2070 2088 2070 2092 0.95

9 12 5.9e-06 0.00068 21.3 1.8 1 23 2100 2122 2100 2122 0.99

10 12 0.00021 0.024 16.4 6.5 1 23 2128 2150 2128 2151 0.96

11 12 0.0012 0.14 14.0 6.4 1 23 2156 2178 2156 2178 0.99

12 12 0.0033 0.38 12.6 5.8 1 23 2184 2206 2184 2207 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.17	20	7.3	0.4	1	23	1690	1713	1690	1713	0.94
2	12	9.8	1.1e+03	1.7	0.9	1	23	1872	1894	1872	1894	0.93
3	12	0.00088	0.1	14.4	2.8	2	23	1897	1918	1897	1918	0.97
4	12	4.3e-05	0.0049	18.6	0.2	3	23	1926	1946	1924	1946	0.98
5	12	8.7e-06	0.001	20.8	5.8	2	23	1953	1974	1952	1974	0.97
6	12	9.9	1.1e+03	1.7	0.1	5	23	1987	2005	1986	2005	0.96
7	12	0.049	5.6	9.0	0.1	2	23	2044	2064	2043	2064	0.95
8	12	0.00028	0.032	16.0	0.3	1	19	2070	2088	2070	2092	0.95
9	12	5.9e-06	0.00068	21.3	1.8	1	23	2100	2122	2100	2122	0.99
10	12	0.00021	0.024	16.4	6.5	1	23	2128	2150	2128	2151	0.96
11	12	0.0012	0.14	14.0	6.4	1	23	2156	2178	2156	2178	0.99
12	12	0.0033	0.38	12.6	5.8	1	23	2184	2206	2184	2207	0.96

Sequence Information

Coding Sequence: ATGGCGGAAAATGTTCAGTGTCCCGTATGCACTTTATACCTGCATGCTGGTATGAACCTTTCAGACCACTTGGAGACACATCCTAAAGAACAAGTAATTCGCGCTCTAGTACAAATGACAATATCTGGAACATCAGTTGGAAACAGCAATAGCAATATTTTATCATCTGCTTTAGCTGGAGACATTAGTAAAGGCAATGATAACAAAAAGCAATTATCTTATTTTGAAGAAAGCCCATTGTCAAGTAGTAAAGATAATGATTTTGATATTGGTAGCGCAGGCAACAGTTGTAGCGCAGGTTTAAGCACTACTAGTAGCATTTGTTCATTGTCAAACCAAAGTATTAGCAGTAGTCACAATTCAAACAATACTTTAAATGCTACCGACACAAAAATTGACCGACATAATGAAACTGAACAGGAAAAAGTACCAACATCTCCATCCATTGTCCCTGTCAATTCAGTGGTTAAAACGGAAACGGCAAACGCACctaaaatgacaaaaaataatgtgaatGGAAGTGGGAATATTAGCCAATGCTTTCCAAACTCAACAGCAAATGAAATACATTCATATAATGCAACAAATAACATTCATAATAACTTTAACGTTTTTGGGATTAATACACGCtatgaacaacaacaacaacaacaacgtaatGCTGTTAATAATCAAAATCCACTATCTACTCCACCTCAAAACATGCCACCACCGCCACCTCCGGCATCTCCACAGAATCTGCATCCACAGGAAATTTCAGGTCGCGGGATTATGCCAGCTGGATCAAATGGCTCATTTCCTTCGCTACAGTCGCAACAGttgccaccaccaccaccaccccCACCTCATATTACTTCTCCGCATTTAGGCAATTCATCCAGTGGTCCCCGTCAGCCTCATATGTATGCTGGAGGCCAACATCAAAATCCACCGACAAATTCTCATCATACACAAAGCCTAAAGGTTATATATGCACCTAATTTGCCACCACCACCTCCATTGCAGCTCTTTACTTATCAACCACAAGCACATTTGCAACAGCATCAGAAACCCCCACCGGCCTATGGCGCTGCAATTAGTCAAATACGATCTCAGCATAATCAAACTAAGCACCAAGTTTCAGGGTCATTGGCATCACAAAACCAACATCCAACATTACAGGCACATTCGGTTttacaacagcagcaacagctGCAACAGCAACATTTGCAGCAACAACAAACGttgcaaaataatttaagagCGCATATACCACCACCTCCGCCACCACCTCCACTTCCCATACCAACAAAACATGCTTTCTCGCAGAAAAGTAATGATTTACCAAATCATTCAACCACTTCTAAGCATAGCCAATCACAAGTACACCAGTATGAATCAAAGTTAGATGTGTCTCAACTCCAACTGAACCAGACGCAGTTGGAACAGCAGCAATGCCAAGCGAATTCGGAAACTGCTTACAATCCAAACAATCACGGTTTAAATTCACATGAAGTTTTGAATAAATCTTCATTAAAGGGAACATCTTCATCTGTCTTGCAAAACTCAAATGCGAATGCGCCTTCAAGTCCTCAACTTTCCATAAGTCCGTctactgcttcagcttcaattGCAGCTGTAGCAGCATCAACATTGGGAAGACACACCAACTCACCTTTTGCAGCATTATTGGCAGCAGCTGCCGGTGCCCCATCCCCTTCAAATACTTCATCTGTTTTAAGATACGCAGAGTCGCCTGTAGCTCATTATTTAGAAAGAGAAAATGGTGACTTTATTGTGCAAGAAACTCCAAAACATATCGTAGAATGTGTGGAAACAGATAATGGAGAATTTTCTGTTATTGAACGCATATATCAATCTCCACCCAGTGTTTTACACATTCATGACGATGacgacgatgacgatgacgacgACGAAGACGATGATGACAATAAAGATAAAGTGCAAATTGAAGGTGAACAACAAGAACATGGTGATTTAAAGCCTGAGAAGATTAATGCAAATGATGCTGAGAGTGACAAATGTAAGGATGACTTGAacgaaaaacaaagaaaaacttCAGAGAAAGATGACAAGCCGAAAAACAGACCAGAAAGCAGAACTAGCTGCGATGGTTCATCTTCAGTTGATAAAGAGATTGTTGATTTCGTAAGCATTTCTAGTGAGAGTGGCGACGAAGAAGAATTTATATCCCAGGAACGAAATGATCACAAAAGTACCAccgaaaagaataaaaaaattttatcactaTCCACTTGCACCCTCTCTATGTCAACGTTGTCTACGCAGTCTTCGCCAAGGCCTTCACTAGTATCGCCTTCATTAGTTACTACGCCAGGTGGCGATCAGTCGATTTCTTCATCTACTTCGTCATCTTTTTCTTCAGCTGCAACAAATACAACATTCACACAACAAAATTCCGTaaccaacagcagcaacaataccAGTAGTCGAAAGAAATCATCAAAAAACACAATCACTGTTTTAAGTGATGTTCAACTGAATTTGAACGAATATTTAGATTTAGTTGGAAATATAATTGCTTCGAGTAAAGTAGCCGCACACCGCAAAACACTTGCTTCCGTTGCTCCCATTCCGCTAGTAAAAATCGAAAAAGAAGAACCGATGGATGAATACTCAGCAACAATCCCTACAACGTCGACAATGGCAACGCCATCAACCAATTTCGAAACAACTCCACCTTTACAGGCCAACAAACATGAGACTGAAGAAATAACTGATATCCCTAGCAATAGTTTTAGTAAACAAACATCAAATAATcataatgtaattttaacaaatgaaCTGGAACAGGATGAAGAAGAAGATAAAAAACCTCAAGTCTTCGTAAATGCATCTGAGAACGGAACAACATCAATCGCACTTTCAAATGCTTCCGCTAGCGTTATGACTATAAATTCCAGTCAAGTTACCAGTGTTATACGTATGGCAACAACTAGTCAGCACCAACAACAAGAACATTTGCTAAACTCATTGGAACAcagcaaaaattctaacgaagCTCAGGACTTGTCACGATCACATCTTAAAGTTCAACCTCCAGCGAACTTTAAAATATTGGCCCATACACATTTGGCTCGTAAAGGTCCAAAAAAACTAGTTATTAAGCCAAAATCAACAAAGACTGATGTTTTGTCAACCTCAACCACTGCAAGCGAACCAAACAAAAATGGAACTAATGATGTTAAAGAACGGCCCACCACTTCTGTCAAGGCTCTACAAGAATATTCTAAACCAATATCTCCCCAAGGCGATCCGCcaaaaacaacagaaataaaagttaaaaatgaaCCCCTTGCTTCTATAACATATGAAAGCCTCCAACAGCAACCTCAATATCAACCACCTTCAAGTTTCAGTATCTTGGAGCAGCATCTAAGTTCAAAAGAACCAATTCTAgattttaaagaagaaaaaccTTGTATAACTGAAGCTAGCTTGCCGCCAACGTCAATTATAAAGGAAATGAAGATAGAAAACAATGTTAATGATGATGCACGTGTGCTGTACGATTTTGCCAATTCGAAGAAGACACAAAACGAAACACCATCAACTTTTCCATCTTCCACATCACTTTTTTCAAGCAAACAAAATTCCTCAGAGATAACATCATTCGAAGAGCCACAAGGTCAGCAATTCACTAAAAGCATCATTCATGATAATGATACATCATGCACATCGTCATCGACATATTCTTCACAATCAGTTATGGATGCTTCGACGCCAACCGAGGAGCAACATGAGAATTCAACAACTGCTTCAGCTGTAACATCAGCTCATATACAACATCAAACTAATCAGGCGTATACTGATTTCCATTTCAATTATCTTTATAATAATGCTGGTGGCAACAATGTAACGCCGGTTCCCGCTGAACAATCCGACATTAAGAACCATGAGCAATTTTCTTCCTTCTATCAAAATCCTACCAATAACAATAACACAATGTTGCTGGAAGACTCATCTTCTAGTAAACAGTATACAGATTACCAACAATTTCAAAGTAGTCACCAACACTTGCAACAACAGCATCCGACTGCTGGGACGTCACACGATCATTGGTTTAACAGTAATAACTACCACACGTCAGAACATAATGTTACACCAATTACATCAAATAATTCAGTCTCTAATATAAATAGCGGCTTGTCCGTTGACGGCAACACCTCTGCATTAGATGGCAGTGAAACCAGTAAATATTTGGACTTGGATTCATGCAAAAGAGAACAAAATATAGATATTCACATCGGCGATAGGGTGACTGTTTCATCAGCTCCACCGCCTCCATCCTCTTCAACTTCGTGTTCGTTTAATGGCGCAACTGACAACAGTATGGCTGGTATATGCTCAAGTGCAGTCGCTCTAAATATGCGTACGGATGAGAAAATGCCAGCTAAAGGTGAAATTTCCGAACAGGAAAGTAATTGTGATATTGATAACTCATGGAGCCAACCGATGTATGCTGATATTTCGGCACGTTTCTTTAAGACAACGTTTCCCGGCATATTTCCGCATGACAACGGTTGGAATCATGAAGAGTATTTTGGCGTGCAGGATTTGAGCGCATCAACAAGTGGTCTCGCTACTAACAGCAGCAATAGTAGAATGAAAAGttttgaaCAAACCAATAGCAGTACCAACAACAGCAATGGAATGGCGTTATTTTCCCAAAATTCAAATGACAATTGCAATATTGATGTTATGCCATCAACGTCAGCTAAAATACGTAAGAGACGTAAGCGTAGCTCTCAAGACGGCAAAACGTCACAAGCTAATGGAAAACGCACGCAACCCACAGCGACTGTAACTTCTCAACAACTGCTAATTCAACATCAAAATGAGGTACCGGGCATTGAGTTTAATTTCCCACATCATCAGGAGTTgaatttacaacaacaacagcacatGCAGCAACCAAGCACATCTACTGCATTTTTGACAGGACCATCAAACGAAGGTACTGATTTAACAACTGGATTTATgacacaacaacagcagcaacagcagcaacaacaacaatcacAGCAAAAACAACGCACAAAAGTCTACGAATGTGGTCATTGCAATGCCAAGTATCCCAAACTTAAAGATCGCAATGCTCATATGATTGATGTTCATAATTACATAAGACAAAATAGAAGATTAGTACATCCTACAAGTGGACTTGTCACTCTCCTTAACAATGTCGATATGCAGGATGTTGCTCTTCCCACAACAAGTGCAGCTAGCAGCTCTTTAATGCCTGGTTTACAAAATGTGGAATGTATGGAGGATTCTAAACAGGGTATTGTAAAATTGGAAAATGAAAATCCCCCACGCGATCCGCCTGGAGTAGAACCAATCAACGCTACCTTGAGTGCTAAAACTGAAATTATGGAGGACGATAAACAAAGTCTAGCCCTGGGCGCAAAAGTTGAAGGAATTATTGAATACGACACTAAACCACCAACCAGTAGTTTGCCGTTGTCGCTAACGACGTGCACCAATAAATTAACAACACTTTATCGTATGCTGGTCTCGTTTAATATgacaacattaaaacaaaaccaaaacctTTCGGAATTCGATGAGAATCTTATAAaatcttcaatatttttttgttacatttgtCGTCAGAATTATAATTCAGTAAAATTGTACGATGCTCATTTGACTGAACATCCCGCTGAGTGTTTTACgtgtggaaaaaaatttcagcggtggaaaaatttttcattgcattTGAAGAGACACTTAGGTTGGAAGGAATTTGGTTGTACTGTATGCGATAAGAAGTTTGTTGTTCGTAGTGCTCTCGTTGAACACATGCGCATGCATTCCGGGCTGTCTCCCTTAAAATGCAAAGTTTGtgGTAAACATTTTAAGCGTTATTCGAACTTAACACAACATCGGAAGCGGCATACGAAACAAATTATTCGTAGGAAAGAGTATGTTTGTTATTGTGGGGAAGTCTTACCATCTAAAGCACGTTTCTTGTGGCATAAAGAAACACATGATTCAAAACCAAAATGTTGTCCGCATTGTTGTGACCGCTTTGTACATGTCAACTCTTTACGTAGACACATACGTCTAGCTCATTCGGATAAATTTGATTACGCAGAACCGATGGAGTGCCCCATTTGCAAGCAAAGATTTGCTAAAGCTTCTATGAAAGCTCATATAGCAACGCATTCCACGGAAACACAGTACGATTGTGCTATTTGCAGCAAGTCTTTCTCAACAAAGtggaatttaaaaatacattcctGGGTACACGCAAATCGCACCGCTAAACCATTCAAATGTGAACACTGTCCCAAGGCATTTGTGCGCGAGGTTGACTTTAAGAATCACATGAATTCCCATAAACAAATTAAACCATACACATGTGAAGTATGTGGTTGTAAATTTATACGCAAATATAATTATATGCGGCATAGAAGAGAGCACCATGGTAGTAAAAAGTATACCTGTGATCTATGTAAAAAGTCGTTCCATCGTCATTACTATCTCATCGAGCACAGACGCATTCACACCGGCGAACGACCTTTTCAATGTTCGATATGTGGCAAAAGTTCAACAACTAAAACTAATCACAACAAACACTTAAAAATCCACCATTCACGTGATCCCTTTACAGTggaagtttaa
Protein Sequence: MAENVQCPVCTLYLHAGMNLSDHLETHPKEQVIRALVQMTISGTSVGNSNSNILSSALAGDISKGNDNKKQLSYFEESPLSSSKDNDFDIGSAGNSCSAGLSTTSSICSLSNQSISSSHNSNNTLNATDTKIDRHNETEQEKVPTSPSIVPVNSVVKTETANAPKMTKNNVNGSGNISQCFPNSTANEIHSYNATNNIHNNFNVFGINTRYEQQQQQQRNAVNNQNPLSTPPQNMPPPPPPASPQNLHPQEISGRGIMPAGSNGSFPSLQSQQLPPPPPPPPHITSPHLGNSSSGPRQPHMYAGGQHQNPPTNSHHTQSLKVIYAPNLPPPPPLQLFTYQPQAHLQQHQKPPPAYGAAISQIRSQHNQTKHQVSGSLASQNQHPTLQAHSVLQQQQQLQQQHLQQQQTLQNNLRAHIPPPPPPPPLPIPTKHAFSQKSNDLPNHSTTSKHSQSQVHQYESKLDVSQLQLNQTQLEQQQCQANSETAYNPNNHGLNSHEVLNKSSLKGTSSSVLQNSNANAPSSPQLSISPSTASASIAAVAASTLGRHTNSPFAALLAAAAGAPSPSNTSSVLRYAESPVAHYLERENGDFIVQETPKHIVECVETDNGEFSVIERIYQSPPSVLHIHDDDDDDDDDDEDDDDNKDKVQIEGEQQEHGDLKPEKINANDAESDKCKDDLNEKQRKTSEKDDKPKNRPESRTSCDGSSSVDKEIVDFVSISSESGDEEEFISQERNDHKSTTEKNKKILSLSTCTLSMSTLSTQSSPRPSLVSPSLVTTPGGDQSISSSTSSSFSSAATNTTFTQQNSVTNSSNNTSSRKKSSKNTITVLSDVQLNLNEYLDLVGNIIASSKVAAHRKTLASVAPIPLVKIEKEEPMDEYSATIPTTSTMATPSTNFETTPPLQANKHETEEITDIPSNSFSKQTSNNHNVILTNELEQDEEEDKKPQVFVNASENGTTSIALSNASASVMTINSSQVTSVIRMATTSQHQQQEHLLNSLEHSKNSNEAQDLSRSHLKVQPPANFKILAHTHLARKGPKKLVIKPKSTKTDVLSTSTTASEPNKNGTNDVKERPTTSVKALQEYSKPISPQGDPPKTTEIKVKNEPLASITYESLQQQPQYQPPSSFSILEQHLSSKEPILDFKEEKPCITEASLPPTSIIKEMKIENNVNDDARVLYDFANSKKTQNETPSTFPSSTSLFSSKQNSSEITSFEEPQGQQFTKSIIHDNDTSCTSSSTYSSQSVMDASTPTEEQHENSTTASAVTSAHIQHQTNQAYTDFHFNYLYNNAGGNNVTPVPAEQSDIKNHEQFSSFYQNPTNNNNTMLLEDSSSSKQYTDYQQFQSSHQHLQQQHPTAGTSHDHWFNSNNYHTSEHNVTPITSNNSVSNINSGLSVDGNTSALDGSETSKYLDLDSCKREQNIDIHIGDRVTVSSAPPPPSSSTSCSFNGATDNSMAGICSSAVALNMRTDEKMPAKGEISEQESNCDIDNSWSQPMYADISARFFKTTFPGIFPHDNGWNHEEYFGVQDLSASTSGLATNSSNSRMKSFEQTNSSTNNSNGMALFSQNSNDNCNIDVMPSTSAKIRKRRKRSSQDGKTSQANGKRTQPTATVTSQQLLIQHQNEVPGIEFNFPHHQELNLQQQQHMQQPSTSTAFLTGPSNEGTDLTTGFMTQQQQQQQQQQQSQQKQRTKVYECGHCNAKYPKLKDRNAHMIDVHNYIRQNRRLVHPTSGLVTLLNNVDMQDVALPTTSAASSSLMPGLQNVECMEDSKQGIVKLENENPPRDPPGVEPINATLSAKTEIMEDDKQSLALGAKVEGIIEYDTKPPTSSLPLSLTTCTNKLTTLYRMLVSFNMTTLKQNQNLSEFDENLIKSSIFFCYICRQNYNSVKLYDAHLTEHPAECFTCGKKFQRWKNFSLHLKRHLGWKEFGCTVCDKKFVVRSALVEHMRMHSGLSPLKCKVCGKHFKRYSNLTQHRKRHTKQIIRRKEYVCYCGEVLPSKARFLWHKETHDSKPKCCPHCCDRFVHVNSLRRHIRLAHSDKFDYAEPMECPICKQRFAKASMKAHIATHSTETQYDCAICSKSFSTKWNLKIHSWVHANRTAKPFKCEHCPKAFVREVDFKNHMNSHKQIKPYTCEVCGCKFIRKYNYMRHRREHHGSKKYTCDLCKKSFHRHYYLIEHRRIHTGERPFQCSICGKSSTTKTNHNKHLKIHHSRDPFTVEV*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01398915;
90% Identity: -
80% Identity: -