Basic Information

Insect: Tachina fera
Gene Symbol: -
Assembly: GCA_905220375.1
Location: LR999967.1:22800964-22804239[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.041 4.7 9.2 5.2 1 23 370 392 370 392 0.98

2 7 1.7e-05 0.0019 19.9 0.2 1 23 398 420 398 420 0.98

3 7 2.7e-06 0.00031 22.4 0.8 1 23 426 448 426 448 0.99

4 7 0.00028 0.032 16.0 2.7 1 23 454 477 454 477 0.96

5 7 0.0001 0.012 17.4 2.5 1 23 483 505 483 505 0.98

6 7 2.9e-06 0.00034 22.2 1.1 1 23 511 533 511 533 0.96

7 7 2.2e-05 0.0026 19.5 0.7 1 23 539 562 539 562 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.041	4.7	9.2	5.2	1	23	370	392	370	392	0.98
2	7	1.7e-05	0.0019	19.9	0.2	1	23	398	420	398	420	0.98
3	7	2.7e-06	0.00031	22.4	0.8	1	23	426	448	426	448	0.99
4	7	0.00028	0.032	16.0	2.7	1	23	454	477	454	477	0.96
5	7	0.0001	0.012	17.4	2.5	1	23	483	505	483	505	0.98
6	7	2.9e-06	0.00034	22.2	1.1	1	23	511	533	511	533	0.96
7	7	2.2e-05	0.0026	19.5	0.7	1	23	539	562	539	562	0.98

Sequence Information

Coding Sequence: ATGCGTAAGGCTTTCAATAACAAGGATCTAATAAAACATTTGCTGGAAATCTacagaaaaaatgaaaaactttggAATCCCAAACATCCCTCCTACAAATACAATGCGCCTCGCACAATATACAAAGAGTTGTCGCAACCGTTATTGATGGAAAAAAACTACTCGTTAACGGGCGAGGAAATTTTCGGTATTTTAACGGAATTGAGAGGACGTTATAGAagagagttaaaaaaattcgaagTGCGCAAAGGCAAATACAAGAGTCGTTTATggtattttgaaaaaatgcaaTTTCTGCGCCAAACTATTGAACAGAAGCGCAAAGAGCGCGACAAAGTTAAAAGTGATGCCTCCTGCGCTCTGGTTTTAAAGGGAAATGATGAGGACTTGAGTAACCGCCAgattttaagttatttattaGATTTATATCGAAAAAATGAGTGCCTGTGGGATCCTAAACATAAAGATTATGGAATGTGTATTAAAACAGAGCGATTTAATGAAATTGCAAAGCAATTGAAAGACAGATTTAATATTCATATGACGCAAAAAGAGTGTTTTgatgaaatacaaaaattacgCATAAGATACCGCAAGGAACTAAGGATTTTACATAAACAAAAGGGATTACACATACCGAAATTGTGGTGTTTCGATGAAATGGAATTCTTAAGGTGTGTCGTAGaagaaaaaatcactaaaaattatgaaaagACTAATCCTACAAAATCCTCActtagcaaaagaaaaaataattttttcaaagccgccgaaataaaatttaacagttTGGAACAACATCTAAAATTCATAGAAATTTATCGCAGTTTTAACACTCTTTGGGATGTGAAACATCCCGATTACAGATCAACTAATTATCGAAGAAAAGCTTTAAATGAAATGCTCGAAATAACTAATACAATTTTCgaagaagaagataagaaattTAAACTAGAAGAATTGGAAAAAACTCTACATCTATTGCGCAAGGATTTCTCCAGTGAAAAATATAAACGCTTGACTAAAAACGATTCAAATAAAGAATCGAAAATGTTTTTGGTAATATACGAAAAGTTAAGTGATTTTTTAGGCATAAATTTGGGTCCCTTTCAATGCAGCAATTGTCAGCAGATATGCAAAACTTATGATCAATATCAAATTCACAAGTCTAAGCATGATGGTGCGCTACCCTTTATGTGCACTCTGTGTGGCAAGGGATTTCAAGCTGTCAGCAATCTTACCGTGCACATTAGACGCCATCGCAGAGATTTCCCCTATTCATGTAAAATTTGTACGAAATCTTTTGCCACTTCAACGGAAGTTAGCATACACATGCGCTCACACACCGGAGAGCGCCCTTATGCATGTCAATGGTGTGATAAGACATTTAAAACCTGGTCCTTCTACGACCTTCACCACAAAAGGATTCATCTCAATAAATCGAATTTTCATTGTCCCATTTGCGATAAATCGTTTTATGAACGTAATCGCTTTACCGATCACATGaacatacatttaaatatacgCAAACATCAGTGCGATCAATGTGGCAAAGGTTTTACAACAGTCGGAAATTTGAAAAAACATTTGGACTTGCATGCACCTGTTAAAAAGTATAAATGTCAGCCGTGTGGCAAAAGTTTTGCACAATTTGCCAGTTTGAAATGGCATCGGAAAACTGAGCACGAACAGTGA
Protein Sequence: MRKAFNNKDLIKHLLEIYRKNEKLWNPKHPSYKYNAPRTIYKELSQPLLMEKNYSLTGEEIFGILTELRGRYRRELKKFEVRKGKYKSRLWYFEKMQFLRQTIEQKRKERDKVKSDASCALVLKGNDEDLSNRQILSYLLDLYRKNECLWDPKHKDYGMCIKTERFNEIAKQLKDRFNIHMTQKECFDEIQKLRIRYRKELRILHKQKGLHIPKLWCFDEMEFLRCVVEEKITKNYEKTNPTKSSLSKRKNNFFKAAEIKFNSLEQHLKFIEIYRSFNTLWDVKHPDYRSTNYRRKALNEMLEITNTIFEEEDKKFKLEELEKTLHLLRKDFSSEKYKRLTKNDSNKESKMFLVIYEKLSDFLGINLGPFQCSNCQQICKTYDQYQIHKSKHDGALPFMCTLCGKGFQAVSNLTVHIRRHRRDFPYSCKICTKSFATSTEVSIHMRSHTGERPYACQWCDKTFKTWSFYDLHHKRIHLNKSNFHCPICDKSFYERNRFTDHMNIHLNIRKHQCDQCGKGFTTVGNLKKHLDLHAPVKKYKCQPCGKSFAQFASLKWHRKTEHEQ*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01398860;
90% Identity: iTF_01074784;
80% Identity: -