Basic Information

Insect: Tachina fera
Gene Symbol: -
Assembly: GCA_905220375.1
Location: LR999965.1:127145983-127149391[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.018 2.1 10.3 0.1 3 23 15 35 13 35 0.96

2 17 0.0077 0.89 11.5 2.4 1 23 41 64 41 64 0.96

3 17 0.68 79 5.4 0.2 3 23 69 91 68 91 0.85

4 17 0.0036 0.41 12.5 0.1 1 22 99 120 99 120 0.95

5 17 4.4e-05 0.0051 18.5 4.5 1 23 128 150 128 150 0.97

6 17 0.00015 0.017 16.9 3.5 1 23 156 178 156 178 0.98

7 17 0.00011 0.013 17.3 1.4 1 23 184 206 184 206 0.95

8 17 0.88 1e+02 5.0 1.3 2 21 213 232 212 233 0.92

9 17 1 1.2e+02 4.8 0.3 2 23 666 688 665 688 0.95

10 17 0.35 40 6.3 0.7 1 10 712 721 712 734 0.75

11 17 1.4 1.6e+02 4.3 3.9 1 23 742 766 742 766 0.92

12 17 1.5 1.7e+02 4.3 1.0 3 23 772 793 772 793 0.96

13 17 0.0085 0.98 11.3 0.3 2 21 806 825 805 826 0.93

14 17 0.00036 0.042 15.7 0.8 1 23 834 856 834 856 0.98

15 17 1e-05 0.0012 20.5 1.5 1 23 862 885 862 885 0.97

16 17 8.3e-05 0.0095 17.7 1.3 1 23 891 913 891 913 0.98

17 17 0.00053 0.061 15.1 1.1 1 21 919 939 919 940 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.018	2.1	10.3	0.1	3	23	15	35	13	35	0.96
2	17	0.0077	0.89	11.5	2.4	1	23	41	64	41	64	0.96
3	17	0.68	79	5.4	0.2	3	23	69	91	68	91	0.85
4	17	0.0036	0.41	12.5	0.1	1	22	99	120	99	120	0.95
5	17	4.4e-05	0.0051	18.5	4.5	1	23	128	150	128	150	0.97
6	17	0.00015	0.017	16.9	3.5	1	23	156	178	156	178	0.98
7	17	0.00011	0.013	17.3	1.4	1	23	184	206	184	206	0.95
8	17	0.88	1e+02	5.0	1.3	2	21	213	232	212	233	0.92
9	17	1	1.2e+02	4.8	0.3	2	23	666	688	665	688	0.95
10	17	0.35	40	6.3	0.7	1	10	712	721	712	734	0.75
11	17	1.4	1.6e+02	4.3	3.9	1	23	742	766	742	766	0.92
12	17	1.5	1.7e+02	4.3	1.0	3	23	772	793	772	793	0.96
13	17	0.0085	0.98	11.3	0.3	2	21	806	825	805	826	0.93
14	17	0.00036	0.042	15.7	0.8	1	23	834	856	834	856	0.98
15	17	1e-05	0.0012	20.5	1.5	1	23	862	885	862	885	0.97
16	17	8.3e-05	0.0095	17.7	1.3	1	23	891	913	891	913	0.98
17	17	0.00053	0.061	15.1	1.1	1	21	919	939	919	940	0.95

Sequence Information

Coding Sequence: ATGCTGGTTAAACTTTCTACTGATGGTGTGCCCAAACTCTTCTGCCCAGTGTGCAACAAAGCCTTAGTATCACTTGCCGGCTATGTAAAGCATGTAAAAAAGCACGAGCCTCCTGGTGGTTTTATGTGTCGCTATTGTGATGCTCGTTACTGTTCAGATGATGAGCTGAAAAAACATCGTGAATCTGAACACACCACCATCGCCTGTCGTCTATGCAAAGATGTCACCTTTACCAATGAAGATGATTATCGGATGCATATTCGTGATGTTCACCAGGGTGTGGATAGAGAAATATTTACTTGCGAAAAATGTGGTGCCACTTATAAGACAATTGATCCCTACCGTCGCCACATCGAAACAGAATGTGGTCGCATTAAGCCACACAAATGTCATAAGTGTCCCATGGCATTTGTAACGAAATATAATTTGAAGCAACATTTGGAAAATCATACAGGCGAATTGAAGTTTTGTTGCAGCTATTGTGGACGTAACTTTAAGCAAAAAGCTCGTTTGGTAGAGCACGAAAGGACCCATACGGGAGAGAAGCCATATAAATGTGATgtttgcGGAAAAACTTTTTCTCATCGCGAGAGTATTGTTACACATTCTTCCATTCATACCGGCATTCGTTTGGTGGAATGTAGAGCATGTGGTTCCAGATTTTCCTGCTATTCCAATCTCATCAAACATCGGCGTAATCGTCCCACTAGTTGTGGCTTGCCGGAATACGATCCTCCTCGAAATcgcattagaaaaaatacttCGCGAATTCCGGCCACTTTGAATCCCACCTCCGAAATCAAGGTGGtaaatgtgaataaaataatcaaaccTGATCATCAAGTGAAAGCGGCAATTGTAAAAAAAGATAATATACTGTTAAAACCTTTAAGAATGAAGCCCACTGCTCGCAAACGTACTGGTGGTAGTCGAGCACAAACATCCAATCTAAGTAAAAGAAGTACTCGAAAAAAggttataaattttgtaatcaaagatgatgatgatgaagattTGAAAACTGGGGAATTGGATAATGAGGTCGCTGACGAAGCTTATAACTTTCCCTTCAAGGCAAAAGAAAAAATGGACATTAAAACTATTGCCGACAACAGTATGTTAGCCCCTACAGAATTTATAGTTAACAATAAGAACAGTGAAGATAAAACTACCACTCCATGGTCTGATGACAGTGAAGATGAATATGTGCCAGATTTTGAACCGGCTGACTCCGATTCGGATGAAGAAGAGGAAACCTCTGTTAAAGATTTCAAAATTCCAATGCCAGCAACTGCCATTAAAAAAGAAAGctatgatgatgataatgaaatGAATATAACCACCAATATACAAATAGAACCCCTGGGAGAGTTCGAATACAATCGCATGGACTCTTACACCGCCGAGGTGAAATATGAAGATGAAGAAGATAATTTATTTGATGAAAAGGATCGCATTTTAGAACATCTACtaaatgaaaatgattatacCCAAAAGCTCGAAACAGGCCAGGACAAATCGAAGAGCCTACCCAGACTCAGAAGGAAATATAAAGGgcttaaaaaaattgataaccAAGATGCTGAGGATATTTTGGGAGAGGCTGAAGTTTACGTAAAATATGAAGAAAGTGATCAAGATGATGATGGCGATGAAGATTATTTAGAAGTTAAATATAATGCCAACGAAATTAACAAGGATGAAATTATAGAATGTTATGTGTTATTGGAAGATATCGCCAACTGCTATCCTGAGTTGAAAGAATCTTCCAGTGTAAAAGTAGGTCGCAATGTTCAACCATTCTTTTCAAAATCGGATAAAATTaagaaacttattaaaaaacgCGGTAAATATCGACCCAGACGTTCAAAGTTTATTAAAGCTGAACCCGGTTCCCATGACGCAAAATCGAATAGATCATATCGTTTAGCTTCAATATCGGCTAAACAATTAAGAGAGCGCATGATACTTTTAAAAAGGCGCGATAGATCTTGGCAATGTACAGATTGCATAAAAATCTATTATATGCGCAAACCTTATGAGAAACATTTAAGAGAGGATCATAAAAAGTCGGAGgactttataaaagaaattttcaaaaaagattTGGAAGATGTCGCCAGCGACGATGTTTTCAAATGCCACATATGCGATAAGATTTACTTGATGGAAAAACGTTTAATATCGCATATACCCAAGCATGGACCGGACGGTACTTTAATACACAAATGTCCCTGTTATTGCACTTTGTATTTTAAGACACGGCAAGAGGCCACCGCCCATGCCCAGGACAAACACAAAGACCTATTGTGGTGTGAtatatgtgagaaatttatgaCAGGTTGCGATGCTTTGAAATCTCATAGAGCACGCATACATGGCGGTAATAAGGACTATAAAAATTCTCGGAATTTGGTGTGCATGAAATGTGGTAAGAAATTTATGGGCCGCACTCAGTTGACCGACCACGAACGTTCCGATTGCGGTCGTTTGCCTTTGTATCAGTGCCAAGTATGTGGCAAATGTTTAACTACAGCCGGTATACTTAAAACACATATGTTACTACACAACGATGCACGGCCGTACCAATGTGATCAATGCGGCAAAACGTTTAAGATTAAGGCCCAATATAAAACGCATATTAAATATGCCCACAACAATGAAAAGCGCTTCAAATGTCATTTGTGTCCCAAGGAGTATCCTTATCGTGAAAGTTTATTGACACATATGTCGGTGCACACAGGCATCAAACGTTTTATGTGCAATGGCTGCGGCAAACGCTTCACCTGTGTTTCGAATCTTCAAGCACATCGCAAAGTTCAGGCAGATTCTTGCGGCCTGTTGCCACTTAATGCCAGAGCCACCCAATATATGGGAGTGCAAAAGGGTAATCTTTTAATGGGTGCCAAACCTGAACCCGGCTTAGATTATGTGGAAACGAGAACATTTGTAGCGAAAGAAGTTATTACCCATGACGTATCGTCCATGTCTCCGGAAATGCAAAGTCAAAACCGAAATATGGAACAGGACCCATCAATAAGCGATGGTATTCCTTTAAACTATGTAACATCGGGATCTGAAATTATACTGATGTATAATAgagattaa
Protein Sequence: MLVKLSTDGVPKLFCPVCNKALVSLAGYVKHVKKHEPPGGFMCRYCDARYCSDDELKKHRESEHTTIACRLCKDVTFTNEDDYRMHIRDVHQGVDREIFTCEKCGATYKTIDPYRRHIETECGRIKPHKCHKCPMAFVTKYNLKQHLENHTGELKFCCSYCGRNFKQKARLVEHERTHTGEKPYKCDVCGKTFSHRESIVTHSSIHTGIRLVECRACGSRFSCYSNLIKHRRNRPTSCGLPEYDPPRNRIRKNTSRIPATLNPTSEIKVVNVNKIIKPDHQVKAAIVKKDNILLKPLRMKPTARKRTGGSRAQTSNLSKRSTRKKVINFVIKDDDDEDLKTGELDNEVADEAYNFPFKAKEKMDIKTIADNSMLAPTEFIVNNKNSEDKTTTPWSDDSEDEYVPDFEPADSDSDEEEETSVKDFKIPMPATAIKKESYDDDNEMNITTNIQIEPLGEFEYNRMDSYTAEVKYEDEEDNLFDEKDRILEHLLNENDYTQKLETGQDKSKSLPRLRRKYKGLKKIDNQDAEDILGEAEVYVKYEESDQDDDGDEDYLEVKYNANEINKDEIIECYVLLEDIANCYPELKESSSVKVGRNVQPFFSKSDKIKKLIKKRGKYRPRRSKFIKAEPGSHDAKSNRSYRLASISAKQLRERMILLKRRDRSWQCTDCIKIYYMRKPYEKHLREDHKKSEDFIKEIFKKDLEDVASDDVFKCHICDKIYLMEKRLISHIPKHGPDGTLIHKCPCYCTLYFKTRQEATAHAQDKHKDLLWCDICEKFMTGCDALKSHRARIHGGNKDYKNSRNLVCMKCGKKFMGRTQLTDHERSDCGRLPLYQCQVCGKCLTTAGILKTHMLLHNDARPYQCDQCGKTFKIKAQYKTHIKYAHNNEKRFKCHLCPKEYPYRESLLTHMSVHTGIKRFMCNGCGKRFTCVSNLQAHRKVQADSCGLLPLNARATQYMGVQKGNLLMGAKPEPGLDYVETRTFVAKEVITHDVSSMSPEMQSQNRNMEQDPSISDGIPLNYVTSGSEIILMYNRD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00435810;
90% Identity: iTF_01398785;
80% Identity: -