Tfer010606.1
Basic Information
- Insect
- Tachina fera
- Gene Symbol
- SMARCC2
- Assembly
- GCA_905220375.1
- Location
- LR999963.1:187580291-187584352[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-15 2.1e-11 45.1 0.2 3 45 650 692 648 693 0.96
Sequence Information
- Coding Sequence
- atgtGTTCTTTAGCGCCTAAAAAAGACGGAAGCCCAAacgttgaattttttaattcgcAGGAGTCCTTGCAAGGCTTTGAAACTATTCGTCTATGGctacaaaaaaattgtaaaaaatATTTGGCCAATAGTAACGAGCCTATAACAAAAGAATCATTGTCCCAATTGTTGATACAGTTTCTACAATATGTTGAAGCAAAGCTTGGAAAAAATTCGGCGGAACCCCCTGCAACTCGGATACCGatgCGTTGTTTCTTAGATTTTAAGCCAGGAGGTGGCTTATGCATCATATTTTCCACAATGTTTCGGTTTCGCGCTGAGCAAAGGGgtaagaaatttgatttttccgTGGGAAAGAATCCCACTCGCAAAGATCCAAATATACCGTTACTGATTGACATTGAACAAGCTTTGGTCGAAGCCGATCTTTACCGTATCCCGTATATATTCATTCGTCCTGAAGTAGATAAGCAATTGGGTACACGACTACGTGAAATTCTAGCAACAAGACGAGTTGAAATCGTATCAGATGAAGAGGACGCCACTCATATAATATATCCTGTGGTTGATCCTCATCCTGATGAATATGCTCGTCCAATTTTTAAACGAGGAAATTGCGTAATGATGCATTGGTACTATTTTCCTGAATCTTATGATACATGGACGCCCAATTCCTTAGAATTACCCGATAATACCCCGGAAAATCCTGAATCTCCAGCCGAACGTTTCCGTGTTTCCGCTTCGTGGATTTTGGATCTTGAACAATACAACGAATGGATGTCCGAAGAAGATTACGAAGTAGATGAGTTgggaaaaaagaaaatgcataaGCAACGTTTATCAATTGATGACATAATGTCTGGTGGTGTAGATGATAAGAAAAAAATGGGTAGCGGAACACCGGGAGTTGCCAAACAAAAGCGCAGGCGCTCTCCATCTCCTAGTTCTTCTAAATCTGTCAAACGTAAACGTTCTCCTGCCGTTCTTCATAAGAAATCACGCAATGATGAAGAAGATGAAGATTTGACACGTGATATGGATGATCCACCTTCTGAAACAAATCTACAAGAGGTTATCAAGACCTCTTCTTTACAATCCACAGCCAGTCCGGCTCCTGCTAACAAATCCAGGGCTGATAATGATATGCTACCTATCAAAGgtGGCACTATAACTGATTTAGATGATGAGATGACTGGAGGTAGTGGCACTCAAGCTTTGTCAACATGTGAAGGCGAAAATTCCCAAACTGGGAAAACCAGTGAAAATAGTAATACTCAAGAATTCTCGTCATCAGCTAAGGAAGATATGGAGGATAATGTGACAGAACAAACCCATCATATAATAGTGCCCTCTTACTCAGCCTGGTTCGACTACAACTCCATACATGTAATTGAAAAACGTGCAATGCCggagttttttaattcaaagaATAAATCGAAGACGCCAGAGATTTATATGGCTTACAGAAATTTTATGATTGATACTTACCGTCTCAATCCTACCGAATATTTAACTAGCACAGCCTGTAGAAGAAATTTAGCTGGTGATGTTTGTGCCATTATGCGCGTTCACGCATTTTTGGAACAATGGGGCTTGATAAATTATCAAATTGATGCAGAGTTACGACCTACACCCATGGGACCCCCACCAACTTcgcattttcatattttatctgATACGCCTTCCGGTATACAGTCTTTGAATCCTCAAAAAACTCAGCAACCATCTGCTGCTAAATCTCTCCTCGACCTTGACAAGAAACCTACAGGCGGTTCTAGCAAAGATGTAAAAGAAGACTCGTTGGACAAGGCACCAGTAGGTATAAAAACGGAACCAGTAGAAAACGGAAGTGCTCCATCAGCTTCCGGTCAGTTTGGATTAAAATTGGACCAGTATGCGAAAAAACCAGCAGCAATGAAAAATAGAACTGCCGCTAGTATGTCTAGAGAGTGGACAGATCAAGAAACGTTACTTTTACTTGAAGGCTTGGAACTACACAAGGATGATTGGAATAAAGTTTGCGAACATGTCGGTACACGCACACAAGATGAATGTATATTACATTTTCTAACACTTCCAATTGAAGATCCATACTTGGAAGATGATGGTGGCTTTTTGGGTCCTTTAGGTTGTCAGCCTATACCATTTAGCAAATCGGGCAATCCTATTATGTCTACAGTTGCATTTTTGGCATCTGTTGTTGATCCTCGGGTGGCTGCAGCAGCCGCTAAAGCAGCTATGGAAGAATTTTCAGCAATCAAAGATGAAGTGCCCGCTACAATCATGGACAATCATatgaaaaatgttgaaaaagcTTCGGCGTCTGGAAAGTTCAATCCATCATATGGATTGGCAAACAGTGGCATCGCTGGTACCGGTGCTGAAAAGGAAGACGAAGATCCTCATTCTGCAACAGTGGGTGGAGCACCACCATCAGGACCTACAGATGAAGAAATGAAGGATCTTTCCAAGAAGGACGATAAAGATATTACCAATTCCCCCTCCAAATCCAAAGACGAATCTAAAGAAAAAGACGACagagaaaaatctgaaaaagaatctgataaaaacaaaattgGCAGTGGACTTGATCTTAAAGATATTAAAACCGAAGAGTCGTGTGGTGAAAGCACAAGTGATGGGGTGACAAaggaaattgatttaaataaacaagtatTTAATGAGGCAAATGTTCAGACGGCAGCTGCAGCTGCTTTGGCCTCGGCTGCTGTTAAAGCTAAACACTTAGCAgctttagaagagcgcaaaattAAATCGCTTGTGGCTTTGTTGGTAGAGACACAAATGAAGaaacttgaaataaaattaagacaCTTTGAAGAATTAGAAACCACTATGGAACGCGAGCGCGAAGGCTTAGaatatcaaagacaacaacttaTAACAGAACGTCAACAGTTTCATCTCGAACAGCTGAAGGCAGCTGAGTTTAGGGCAAGGCAACAGGCCCATCATCGCCTACAACAGGAACAGCAGTGGCAAGGTGGTACGGCAGTACCAGGAGCTGCTGCAAGTACAACTGCATCCACAGCAGCTACTGGCTCTACCACGGGCTCTGCAGTGTCTCAAAACAACGTTTTAACTGGAGCACCTCCAGTTGGTTCACAATTAGGTTCCAGTACTTCGACACCAGGTGTTCCCACTAATGCTTCACCCCATGTTGGACCAACTGCTGCTAATCCACCAAATCCTGCAGGTGTTCCAACAATCGGAACACCAACTGTGGGGCAAAATACAACTTCTATGGATACAACTTCAGGAGCTGGTACTTCTACAGGAACTTCTTCAGACATGTCTAATGCGATGACACCTTCGGCTCCGTCTACAGCACCTTCAAATTCCTCTGTTCCAATAACTACCAATGTATCAGGCCCCGCCCTATCCACACCTAATATTCCACCTTCTTCAGGAGGCCCCACCACTGCTCCTACAAcatcttaa
- Protein Sequence
- MCSLAPKKDGSPNVEFFNSQESLQGFETIRLWLQKNCKKYLANSNEPITKESLSQLLIQFLQYVEAKLGKNSAEPPATRIPMRCFLDFKPGGGLCIIFSTMFRFRAEQRGKKFDFSVGKNPTRKDPNIPLLIDIEQALVEADLYRIPYIFIRPEVDKQLGTRLREILATRRVEIVSDEEDATHIIYPVVDPHPDEYARPIFKRGNCVMMHWYYFPESYDTWTPNSLELPDNTPENPESPAERFRVSASWILDLEQYNEWMSEEDYEVDELGKKKMHKQRLSIDDIMSGGVDDKKKMGSGTPGVAKQKRRRSPSPSSSKSVKRKRSPAVLHKKSRNDEEDEDLTRDMDDPPSETNLQEVIKTSSLQSTASPAPANKSRADNDMLPIKGGTITDLDDEMTGGSGTQALSTCEGENSQTGKTSENSNTQEFSSSAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGIQSLNPQKTQQPSAAKSLLDLDKKPTGGSSKDVKEDSLDKAPVGIKTEPVENGSAPSASGQFGLKLDQYAKKPAAMKNRTAASMSREWTDQETLLLLEGLELHKDDWNKVCEHVGTRTQDECILHFLTLPIEDPYLEDDGGFLGPLGCQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFSAIKDEVPATIMDNHMKNVEKASASGKFNPSYGLANSGIAGTGAEKEDEDPHSATVGGAPPSGPTDEEMKDLSKKDDKDITNSPSKSKDESKEKDDREKSEKESDKNKIGSGLDLKDIKTEESCGESTSDGVTKEIDLNKQVFNEANVQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRLQQEQQWQGGTAVPGAAASTTASTAATGSTTGSAVSQNNVLTGAPPVGSQLGSSTSTPGVPTNASPHVGPTAANPPNPAGVPTIGTPTVGQNTTSMDTTSGAGTSTGTSSDMSNAMTPSAPSTAPSNSSVPITTNVSGPALSTPNIPPSSGGPTTAPTTS*
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01314595;
- 90% Identity
- iTF_01398425;
- 80% Identity
- -