Basic Information

Insect: Tachina fera
Gene Symbol: lola
Assembly: GCA_905220375.1
Location: LR999967.1:40487850-40490105[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 1.1e-11 3e-08 34.6 0.0 4 45 419 460 416 460 0.91

2 2 4.8 1.3e+04 -2.7 0.9 4 20 559 574 559 574 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	1.1e-11	3e-08	34.6	0.0	4	45	419	460	416	460	0.91
2	2	4.8	1.3e+04	-2.7	0.9	4	20	559	574	559	574	0.86

Sequence Information

Coding Sequence: atGGGCGGTCCTCCAGCCCCAACGCCCTCCATAGGTCCCCCAGAGGGCCAAACTTATTGCTTGCGTTGGAATAATCACAAATCCAATTTGGTAGAAATATTAGATGCTCTCATAAAAGTTGAAAGTTATGTAGACTGCACCATAGTCGTAGATGATCAAGTGCAATTCAAAGCACATCGTGTAGTTTTGGCTGCTAATTCACCATATTTCCAATCCATTTTGCAGGATTTGCCCATGGATCATTGTAGTATTATATTTCCTGGTGTGAAAGCCTTTGAGATGCGTGCGCTATTGGAATATATGTACACAGGAGAGGTTAATGTTACACAAAGTCAAATACCCAAGATAATGCGCATTGCGGAGGAATTAGAGGTGAAAGGTCTTTTTGATATGGCTgacttgaaagaaaaatttaacaaattgacTGAAGAGCACGCTGAAAGATCCATAAGTAACCCTTATACAAGTACCGCAGCTCCCTCCAATCCCTATTCCTCTGTCACCACTACCTCCTCACCAATCACTGCCATACCGAATCACAAGCCTAGTTCGAAGGATTCGGATAACTATCCTAATAATTCCTCCTATGTGATCTCTACCTCCACGAACATTTCGCCTTCAGCTGCTCCCTCAAGCAGTTCCTCGCCCCCATATAGCAATTACAAATCGCCCTATTCTAGCTTGTATGCCAAATCGCCAGGCCCCCATTTAACTCAGTCCTCAGCGGTTCAGCCTCAATCCAGTCAACAAAATCCTAGTAACCTTATACCCACTAGTGAGCGTTCCTCTCAATGGCCTTTGTCACCTTCGGCAGCTGCCGCTGCTGTTATGTTAAGTTCCGTTTATGAATCTGCTCCTGATATGAACCCTCTAAAACGCAAAAAGCTCTCCTCAATGTCTAGTATGTTAATGAACCGTGACACTCCAATATTACGCAATGTCTTAGCACAAACAAATCCGGCTGACTCTTCACAACAATTGCCTCTGCTGTTGCCCAATGCAGTAGCCAACACTAAAATCGATAGCAAGCCTCCAAACTTGGACAAGAATGTAAGTGGTCATAGCAACAATCACAGTTTTAATGGTTCAGATTACAGTGAAAAGAAATACCCAGATGAGCCACATTCCCCTTTCACCGATCGTTCCTTCGAAGACGATAGTTTTGATCAGAAAGGCAGCAATTTCGGAAGCAATTTTGGCAATAATTCCAACCAAAAACCCGAATGGAAACGTTACAAACAATATACGCGCAGTGACATCATGTCAGCAATACAGTGCGTACGAGAAGGCATGAGTGCTTTGCAAGCTTCACGTAAATTCGGTGTGCCATCGCGTACGCTGTATGATAAAGTCAAGAAGCTGGGCATAACTACTGGCCGTCCGATGAATCGTACCATGAAACGCAGTCCCAGCAGCGCAGAATCATCAGCTGCCTTCCCCTATACTCACGGTTATGGCCAAGCTACggctgccgctgctgctgctgccatgCACGATGCAGCTACTCGTGACGATCGTGAATTGAAAGAACATCACCGCACAAATGAACATCATCATTTACCACCCACCATTCCTCACCCAGCTGCTGCCTTATTAGATCACGCTTTCCTGCAACAGGCCTTAGAAAATCGTGGTGGTGGCGACATTGCTGGTCGTGAAGCTCTTCATGCCATGGCGTTAGCAGCTGCTGCTCATGCGGCCGCCAATCGCATGTCCACTAGTCCAGGCCCCAATGGAAATGCTGTTCGATCTCCTAGCCCTACTAATTTCGCTTTGAAATATGGCAATTTACGAAATGCAGAACAAGAGTTAATGGAACGCCATGAATTCGAACGTGAGCGTGAACGTGAGCGTGAGCGCGAGCGCGAGAGGGACCGTGAATATGCTGAAAGGGAGAGAGATCAAGAGAGAGAACGTGACATGGAACATGAACCTGAAGAAGAAGATGAAGATGATCATGTTGAGGATTTGTCAGTTGCACGCAAAGACAGCAACCATTCCCCACCGTTAGAGCCAAGAGATACACCGGCATCCCCCTACTCACCCAAAGTGCCAGCCAATGGAGATAATGAAAAATCTGTTATAATGACAACTAAATTGTCCTCAAATCCCAGTAACGAAACCTTTATGAATGACACAAGTATGAAACGTGAGGTTGTAATAGATGACGTCAGAGCCGACTGA
Protein Sequence: MGGPPAPTPSIGPPEGQTYCLRWNNHKSNLVEILDALIKVESYVDCTIVVDDQVQFKAHRVVLAANSPYFQSILQDLPMDHCSIIFPGVKAFEMRALLEYMYTGEVNVTQSQIPKIMRIAEELEVKGLFDMADLKEKFNKLTEEHAERSISNPYTSTAAPSNPYSSVTTTSSPITAIPNHKPSSKDSDNYPNNSSYVISTSTNISPSAAPSSSSSPPYSNYKSPYSSLYAKSPGPHLTQSSAVQPQSSQQNPSNLIPTSERSSQWPLSPSAAAAAVMLSSVYESAPDMNPLKRKKLSSMSSMLMNRDTPILRNVLAQTNPADSSQQLPLLLPNAVANTKIDSKPPNLDKNVSGHSNNHSFNGSDYSEKKYPDEPHSPFTDRSFEDDSFDQKGSNFGSNFGNNSNQKPEWKRYKQYTRSDIMSAIQCVREGMSALQASRKFGVPSRTLYDKVKKLGITTGRPMNRTMKRSPSSAESSAAFPYTHGYGQATAAAAAAAMHDAATRDDRELKEHHRTNEHHHLPPTIPHPAAALLDHAFLQQALENRGGGDIAGREALHAMALAAAAHAAANRMSTSPGPNGNAVRSPSPTNFALKYGNLRNAEQELMERHEFERERERERERERERDREYAERERDQERERDMEHEPEEEDEDDHVEDLSVARKDSNHSPPLEPRDTPASPYSPKVPANGDNEKSVIMTTKLSSNPSNETFMNDTSMKREVVIDDVRAD*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00258994;
90% Identity: iTF_01138148;
80% Identity: iTF_01397571;