Svit003113.1
Basic Information
- Insect
- Syrphus vitripennis
- Gene Symbol
- grn
- Assembly
- GCA_958431115.1
- Location
- OY288108.1:44357854-44376176[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.6e-20 6.1e-16 58.8 4.7 1 35 287 320 287 321 0.98
Sequence Information
- Coding Sequence
- ATGCCATCGTCACATACATCGCCTCAGGTATGCCGACCACACTTTCATCCGCCCTTAAGTTCGTGGCTAACCAGCGATCATAAATCATTTCCGCCTGGCAGTCCGTGGGGTAGTCCGTTTGCATGTCCACAGGATCCGCAGGATAAAATTGGCGGCCAAATACAAAGCCATCAAACGGGTCAGCATTCATTTCCATTCCCTCCAACACCGCCAAAGGACTCAACGCCCGATTCAGTACAAACAGGCCCATCCGAATAtcaggCTGCTGTGAACGCATTCATGCATCAAGCACAAGCATCAACTACCTCACTTAACGATACGAGTTGCGCTTTGGATATTAAACCAACGATACCAAACGGTAATGGTGGCATTGGAGGCGGTGGTGGCGGCGTCATCGGTGGAGTATCAAATCAAGTTCCTGCGCCCAAACAACGTGAAGGTACGAATGCGGGTAACAGTAAtagcaataacaacaacaataccagCAGCAATAATCACAATACGCATGGGGctagcaataataataataataataacaataataataataatcatccaacaagtaataataataataacaacaacaacaataattcaGCATTAAATGGTGTTGCAAGCAGCATATTTGATAGCACACAAAGTGCATACGGGGTAGGTGGCGGCGGTGTAGGTGTAGGAGGCAGTGTTGGGTATGAACCCAGTTATGCTGCAGCatatcaccatcaccatcatcaccacTCTCACCATCAAGCAGCAACGGCTGGAATGTTCCAAAGTGCAGCCAGGCAAGCGGGTATGAGCAGCCAAGATGTGAAACCACAAAGGACGAAGCCACGCACAAGTGCCGaaGGCCGAGAATGTGTAAATTGTGGCGCCACATCAACGCCATTATGGCGAAGAGACGGAACTGGACATTATCTGTGCAATGCATGCGgattatattataaaatgaatGGACAAAATCGACCTCTGATAAAGCCAAAGCGAAGACTGGGTTGTTCTCCCTACATTAACCCAAACCAAAAGATACTTCACTTCGTTGGAGGTTTAGAAGAGAAGTTGGCGGGTGTTGTTTGGGTTTTGACTATGCGCGATGGTTGGATGTTTAAAGTAGAGTGCTAA
- Protein Sequence
- MPSSHTSPQVCRPHFHPPLSSWLTSDHKSFPPGSPWGSPFACPQDPQDKIGGQIQSHQTGQHSFPFPPTPPKDSTPDSVQTGPSEYQAAVNAFMHQAQASTTSLNDTSCALDIKPTIPNGNGGIGGGGGGVIGGVSNQVPAPKQREGTNAGNSNSNNNNNTSSNNHNTHGASNNNNNNNNNNNNHPTSNNNNNNNNNNSALNGVASSIFDSTQSAYGVGGGGVGVGGSVGYEPSYAAAYHHHHHHHSHHQAATAGMFQSAARQAGMSSQDVKPQRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLGCSPYINPNQKILHFVGGLEEKLAGVVWVLTMRDGWMFKVEC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00894432;
- 90% Identity
- iTF_00894432;
- 80% Identity
- -