Basic Information

Insect: Syrphus vitripennis
Gene Symbol: ken1
Assembly: GCA_958431115.1
Location: OY288108.1:60214234-60223847[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.9 8.9e+02 1.7 0.8 1 9 243 251 243 254 0.86

2 18 0.00076 0.11 14.0 1.0 1 20 382 401 382 402 0.95

3 18 0.00011 0.017 16.6 0.8 1 23 410 433 410 433 0.94

4 18 0.0011 0.16 13.5 0.6 1 19 623 641 623 643 0.94

5 18 1.1e-06 0.00016 23.0 0.6 1 23 651 674 651 674 0.97

6 18 1.7e-05 0.0025 19.2 1.0 2 23 879 900 878 900 0.97

7 18 3.9e-05 0.0058 18.0 0.6 1 23 906 929 906 929 0.96

8 18 0.00011 0.017 16.6 1.0 1 23 935 957 935 957 0.99

9 18 0.67 1e+02 4.7 0.6 2 23 1008 1029 1007 1029 0.93

10 18 4.3e-05 0.0065 17.9 1.9 1 23 1062 1084 1062 1084 0.98

11 18 0.00012 0.018 16.5 1.5 1 23 1090 1113 1090 1113 0.95

12 18 5.2e-07 7.8e-05 23.9 1.6 2 23 1196 1217 1196 1217 0.98

13 18 1.4e-06 0.00021 22.6 1.8 1 23 1223 1246 1223 1246 0.97

14 18 0.0011 0.17 13.4 0.6 1 23 1252 1274 1252 1274 0.99

15 18 1.8e-06 0.00027 22.3 2.0 1 23 1348 1370 1348 1370 0.99

16 18 0.00042 0.063 14.8 1.0 1 23 1377 1400 1377 1400 0.96

17 18 0.0014 0.21 13.2 1.8 1 23 1406 1428 1406 1428 0.99

18 18 2.8 4.2e+02 2.8 0.0 2 21 1500 1518 1499 1519 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.9	8.9e+02	1.7	0.8	1	9	243	251	243	254	0.86
2	18	0.00076	0.11	14.0	1.0	1	20	382	401	382	402	0.95
3	18	0.00011	0.017	16.6	0.8	1	23	410	433	410	433	0.94
4	18	0.0011	0.16	13.5	0.6	1	19	623	641	623	643	0.94
5	18	1.1e-06	0.00016	23.0	0.6	1	23	651	674	651	674	0.97
6	18	1.7e-05	0.0025	19.2	1.0	2	23	879	900	878	900	0.97
7	18	3.9e-05	0.0058	18.0	0.6	1	23	906	929	906	929	0.96
8	18	0.00011	0.017	16.6	1.0	1	23	935	957	935	957	0.99
9	18	0.67	1e+02	4.7	0.6	2	23	1008	1029	1007	1029	0.93
10	18	4.3e-05	0.0065	17.9	1.9	1	23	1062	1084	1062	1084	0.98
11	18	0.00012	0.018	16.5	1.5	1	23	1090	1113	1090	1113	0.95
12	18	5.2e-07	7.8e-05	23.9	1.6	2	23	1196	1217	1196	1217	0.98
13	18	1.4e-06	0.00021	22.6	1.8	1	23	1223	1246	1223	1246	0.97
14	18	0.0011	0.17	13.4	0.6	1	23	1252	1274	1252	1274	0.99
15	18	1.8e-06	0.00027	22.3	2.0	1	23	1348	1370	1348	1370	0.99
16	18	0.00042	0.063	14.8	1.0	1	23	1377	1400	1377	1400	0.96
17	18	0.0014	0.21	13.2	1.8	1	23	1406	1428	1406	1428	0.99
18	18	2.8	4.2e+02	2.8	0.0	2	21	1500	1518	1499	1519	0.92

Sequence Information

Coding Sequence: ATGCCTGTGGGATTCTCTAAGGCATGCCGAACATGCTTAACACTCGATGGAACACTTATTTCAATCTTCGATTCAATAAGCTACGATGGAAGAGGACGTGTTACCGATATGATTAAAGACTTTACGAAAATCAAACCTATTAAATCCGATGGCCTCCCTGAACTAGTTTGTCAGACCTGCTTAAATGAAATTAATCGATGTTATTCATTCAAAGTCAAGTGCTTAAATTCCGATAGTACATTGAGGAAACTCTTTGCTACTGAAGAAGAGCTTGAAGCATCACCCCAACAACAGGTGGTGGACAACGAAAAAGAATATAAACCTATCATTCAGAATCTCGTAAGACTTCATGGTTCTGATGAAGAAGAACAAGAGTTTGAACAAccagttaaaattaaaactgaaaaagatCCAGACGACCAATCGTTTGGATACTTTGTTATTACTTCTGTTTGTAGCCAAAATGCTGAAATAAGTGAAGTTAGCGGTAAAGAAACATTTCAAACGCCAcaagtttttattaaagaagAGATAAATTACGAGTTTGATTCGTACAATACATTATCAACGGGACGTTTAACGTATAGCGGTGAAGCGGGTGCAAGTGACCAGTCAcattattttgataatatttctTTCGAATTACCATGTCCACAAGTTAAACTAGAACCTGAAGAGCCATTAGCACTGGAACCTCCAATTATAAATGCAACAATAAGGCCCCGTTATCAATGCACTAAGTGCAGCAAGGCAAGCACcttcatagaaaaaaaggaaaacgaaGAAATTTCTCAACATGCCAAACAAAGCAGTACGATCATAGCAGGTGAACAGAATCAAGAACTTAAATGCGATGAAAAAACTAAAGTTACCAACATTAATTCGGATGAGAGTATTATAGAACAACCTTTTGCCTGGATGAGTGAGCGTTTCACAAGACGTTCGGCTCGAATTTAtagagaagaaataaaaactccAGATagcgaaaaaaatcaaataaaacctGATATTAGTGCTAGCGAATcaattggaattaaaataaCAACGAGACAGTCAGAGAAGTTAAATCAGACTGATCATTCTATTGATGGCCAATATCACAATCCAGTTGATGATAAAAATAGTCCAGATGGATCACGACAATTTAACTGTGCTCATTGCCCCAAAGTATTTAAATACCTTTCACTATTTAACAAACACGTGGTTTGTCACAGCGATGCCAGACCATTCGATTGCGTTAATTGtggtaaatttttcaaaactactgGCCAATTATCTCAACACATCAAAGCAACCCATAAAAAATCTTCCTTTAGAAGTCGTAGGAAACCATTTTCCAGACGACGCCGCTTGAAccgaaaaaatgtcaaaaaaaaatgtattgataaTACAATGGAGACTAGCAACATTCTCGAACACAGCAATGCTCTGCTAATTGAAAGTGAAACCAAAGACGAACAAGCAAATGTAACCAATTACACTATTTCGGCTGATGATAATGTTATTGAAAACGAAAACCAAGATGGCCATAGAAAAGAGACCAACAAAGATcaattagaaaatgtaaatgaaaaagaTAACACAAATGAAAACATTCATAGTTTACCAGAAAACGAATCAAATCCAGCTGTaaccaataaaaacaaatccaataAATTTGATTTCCCATCGGAAcgttctaaaaaattaattaaagaaaacgCAGACAGTGTTAAAACTCAAATACAATCCAGTAGTAATGCTAGGTCAAGTAgaagtaaaataataacaagGCAGTCTGAGAAGTTATCACAAATCGAGTATTCGTTTGACGGCCAATGTCAAAATACCATTGATGATCAAAACAGCACCGAAGGATCacgaaaatatatttgtccTCATTGCAACAAGGTATTTAAATATCTTTCACGTTATAACGAACACGTAGTATGTCATAGCGATGCCAGACCATTCGATTGCGTTAAAtgtggaaaatttttcaaatcaccTGGGCAACTAGCGCGGCACATCAAAACAACTCATCAAGGAGTAGCGTTTAGAGGTCGTAGAAAACAGTTTTCCAGACGACGTGgtttaaaacgaaaaattgtaaataagaAATTTGTTCGTAATACAGTTGAGCCCGGCAGCAGCAATAGTCTCGAACATACATATGATCAGATAATTGAAAGTGAAAACAAAGACGAACCAGCAAGTGTAACCAACTGCAATTATCCGTCAGATAATCGTGTACTTGAAAATGAAGATCACGATGACAAAACAAATGAAACCGACAAAGATCAATTAGAAAATGTTAATGAAGACAAACATACGAATAAAATCATTCATAATTTACcagaaaatgaaacaaacatcaataaacaaaaatcgaatAAGATTGGTTCAACATCGGAAAATCCCGAAAATTGGCCAATTCCAACTGTTCTTGAAAAGAGTTTCGAGACAGAGAAAATTATTACTAATGAACCACGAACTTATCATTGTGAGCGATGTAATGAAAAACCAGAGTCGGTTGAAATAATTATGAATCTCTCAAAACCAGAACCGGGACCAGATCAATTGAAACAACCACAAATTGAGTCGCTAGCGAATGAATTAgcagaaaaaagttttaataagtCACCGAAAAATCTGGAGTGTCCTACATGCAAGAaagtTTTTCAGTACGTGTCGTACCTTAAAAAACATATGCAAAGTCACAGCGATGAACGAAACTTTATATGTGCAATATGTGATAAAGCTTTCAAATATAAAGTTAGTCTAAAGTCTCACAATAGAATAACTCATGCTAAATACAAACCATATAAATGTGATAAATGCCCTCAAGCTTTTGTCAATGAGTACACCTACAGAGTACATCGCAATTCACACAACAAggtgaataaaagaaaaaccaagACTAAACGACGCCGGGCACTTGAAAAACCCAGTATTTCTGAGTCAATAAGCACTAGTATTGAGCAAAGCTTTAGCGGATTTAAAGAAGATATAGTGGCtgttgaaatgaaaaatcacCTGACATCTTGCTCAATGTGCTCTATTTCAATTCAGTCGgataaattaaaagaacatATGCAGCAATACCACAATACAACCGAATCAACATGCGCCCAAGTTAATTCTATTAATCATTCCGATCAAGCAAATAATCTTATTCccgaaacaataacaacaacaaattcctTTGAGTGTCTTCAATGTAATAAAgTATTTCTGTTTGCTTCGTACCTTAAAAAACACATGCGAACTCACAACGATGAAAGACCACACGTCTGTACAACTTGTGGCAAAGCTTTCAAAGACCTTTGGAGGCTAAGATCTCATATAAAGGAAAAACATAActcatattccaaaaaaattattcgcagAAAGAAAAGAAGGAATTTAAATCACGAGAAACCATTGGCTACAATTGATGGCAATGCGGATGGacaagataaaaatgaaaaagttgaaGAAATAAGCGAAGTCTTGAATGTTCCTCAAGAAAAtcttaatgaaataaattcagtTCAACTGGGAATTGAGAACGCAACTACAACATTAGGGGAGGTAGAAGGGCCAAATATCGAAATTGAAAAACCGCAGTGTACCCTATGCAACAAAGtaTTCAAATTTGCATCGCAACTTGAAACACACATGCGAACACATACTGGCGAAAGACCTTATGAATGTCCAACCTGCTACAAGACCTTTACACAAAATGGTCATCTTAAAAATCATATCCtgataaatcataaaaaaataatgcccTTCCAGTGCAGTGTTTGTTTCCGAGGATTTGCAAGTGGTTATAATATGAGAGCGCATGAGAAAACCCACTTAAATgaacataaaaagaaattaaaaaaaaataataacaaacataCAGGCCATGATAAACATTCTATGACCGAAACAAGTAAAGAAACCGTCCAAACCCCTCAAAATGACCTTCAAAATCAAGTTATAgaggattttgaaaaactagAACTGCATCCACTTTTTGGATCTATGTCTTCAAATCAAGACGAGAACATAAAAAACGAACAGAATAGCTACTATCCCTGTCCGAATTGCACTAAAActtttgtGTTCCATTCGGATCTCAATGAGCACATGAAAACTCATGCTGTTAATGCAAGACCATTTGATTgttcaatttgtttgaaaagtttcaaaaaagaaGCTTACCTTAAAATTCACACACAAATGAGTCacacaaaaacaagaaattacaAATGCAGTGAATGTGACCGGGTATTCCTTACATTCTATATTCTCAACAAACATATGAGATcacacaaaggaaaaaaaatacgcaGTAAAGCTAAATCCAAGCGTGGTCATAAAAAAGTTAATCGCTTAAAACAAACTGAATGCTTTGCTGAGCAGGTCGGTAGCCGcattgaagaaaatgaaaaaaatgaacagCAGGATGAAGGAGTTTTTGACactataaatttttcaaatgaacaaGTACAACGAGAAACAGCTGTTGCGGGTAATGTACAAATAACTTGTGCACTGTGTTCCATTTCAGTTGATTCAGAAAGTTTAACAGATCATATGAAACAGTGCCTTAGCATATCACAAACTACTGGCATTCAATTGAAATCAGAACCTTTGGAAGATCAACAACAAACAGATCATCCACTTTTCGATAGATTTTCAAACCAAGATACCCAAGATGAGCAACTTACTGATACTGGCATAGGCAAGCAGTGTTTAGAGTGCAAACAAGGTAAGAGTTAA
Protein Sequence: MPVGFSKACRTCLTLDGTLISIFDSISYDGRGRVTDMIKDFTKIKPIKSDGLPELVCQTCLNEINRCYSFKVKCLNSDSTLRKLFATEEELEASPQQQVVDNEKEYKPIIQNLVRLHGSDEEEQEFEQPVKIKTEKDPDDQSFGYFVITSVCSQNAEISEVSGKETFQTPQVFIKEEINYEFDSYNTLSTGRLTYSGEAGASDQSHYFDNISFELPCPQVKLEPEEPLALEPPIINATIRPRYQCTKCSKASTFIEKKENEEISQHAKQSSTIIAGEQNQELKCDEKTKVTNINSDESIIEQPFAWMSERFTRRSARIYREEIKTPDSEKNQIKPDISASESIGIKITTRQSEKLNQTDHSIDGQYHNPVDDKNSPDGSRQFNCAHCPKVFKYLSLFNKHVVCHSDARPFDCVNCGKFFKTTGQLSQHIKATHKKSSFRSRRKPFSRRRRLNRKNVKKKCIDNTMETSNILEHSNALLIESETKDEQANVTNYTISADDNVIENENQDGHRKETNKDQLENVNEKDNTNENIHSLPENESNPAVTNKNKSNKFDFPSERSKKLIKENADSVKTQIQSSSNARSSRSKIITRQSEKLSQIEYSFDGQCQNTIDDQNSTEGSRKYICPHCNKVFKYLSRYNEHVVCHSDARPFDCVKCGKFFKSPGQLARHIKTTHQGVAFRGRRKQFSRRRGLKRKIVNKKFVRNTVEPGSSNSLEHTYDQIIESENKDEPASVTNCNYPSDNRVLENEDHDDKTNETDKDQLENVNEDKHTNKIIHNLPENETNINKQKSNKIGSTSENPENWPIPTVLEKSFETEKIITNEPRTYHCERCNEKPESVEIIMNLSKPEPGPDQLKQPQIESLANELAEKSFNKSPKNLECPTCKKVFQYVSYLKKHMQSHSDERNFICAICDKAFKYKVSLKSHNRITHAKYKPYKCDKCPQAFVNEYTYRVHRNSHNKVNKRKTKTKRRRALEKPSISESISTSIEQSFSGFKEDIVAVEMKNHLTSCSMCSISIQSDKLKEHMQQYHNTTESTCAQVNSINHSDQANNLIPETITTTNSFECLQCNKVFLFASYLKKHMRTHNDERPHVCTTCGKAFKDLWRLRSHIKEKHNSYSKKIIRRKKRRNLNHEKPLATIDGNADGQDKNEKVEEISEVLNVPQENLNEINSVQLGIENATTTLGEVEGPNIEIEKPQCTLCNKVFKFASQLETHMRTHTGERPYECPTCYKTFTQNGHLKNHILINHKKIMPFQCSVCFRGFASGYNMRAHEKTHLNEHKKKLKKNNNKHTGHDKHSMTETSKETVQTPQNDLQNQVIEDFEKLELHPLFGSMSSNQDENIKNEQNSYYPCPNCTKTFVFHSDLNEHMKTHAVNARPFDCSICLKSFKKEAYLKIHTQMSHTKTRNYKCSECDRVFLTFYILNKHMRSHKGKKIRSKAKSKRGHKKVNRLKQTECFAEQVGSRIEENEKNEQQDEGVFDTINFSNEQVQRETAVAGNVQITCALCSISVDSESLTDHMKQCLSISQTTGIQLKSEPLEDQQQTDHPLFDRFSNQDTQDEQLTDTGIGKQCLECKQGKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -