Svit003739.1
Basic Information
- Insect
- Syrphus vitripennis
- Gene Symbol
- SNAPC4
- Assembly
- GCA_958431115.1
- Location
- OY288108.1:54812804-54820358[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 0.076 1.8e+02 3.4 0.1 10 46 422 464 421 464 0.83 2 5 4.1e-10 9.6e-07 29.9 0.0 3 44 472 514 470 516 0.94 3 5 1.9e-13 4.6e-10 40.5 0.4 2 43 526 571 525 573 0.95 4 5 5.9e-09 1.4e-05 26.1 0.0 4 44 583 624 580 626 0.90 5 5 4e-14 9.5e-11 42.7 0.2 3 44 634 676 632 677 0.96
Sequence Information
- Coding Sequence
- atgtcaacgaAACAATCTCGTGGTGCTAAGGCCTATGAAGTCCAAAAAggatatttgttgaattttttggagGGAAGACCAGATTTAGCTGCTGACAAATTCGTTAATGCCGACGGTTCTCATACTCGAGACAGAGAGTGGAGCGAGAGTACCACCCAAACTCTCAACAGCCCGGGTGGAGCTATTAAAGACGGGCCAAAGTGGCGAAAGTACTGGAGGGACCTAGTaaataaTGTCCGTGCCAAAGATAGCTCCATAAAAGAGGAACTTCTCAGATCGGGCATTAACGgattcgttaaaataaaaagtttgatCGATAGCGAGAAGCGAATTATATCCATAATTACTCCAGAGTCCGTCGAGGGAGTCTCCCATTCAGTGGACGAAATGGGATTCGAaccgattgttGCACAAAACATCGATTTCGAGGTAAGCGGTCCATTTGTGTCGGATGGAATAATGAGAACAACAACGGTTTTGTTTGGTCCAGTCGATCTTGAACCACAACCTGAACCCGAaccagctttgtatatgaaaactatagtactctcatggtggaaatcgaatggggtgacatctaatAGTGAATTTGATACAATGTcatcacaaaagaaaaaacctaaattaacagctcaaaaaacaaatatccaaAGTGAGACATCCGACAATGATAGTTTCAGCGAAGCAGAAGactgtgatgatgatgataatgatgatgaaacaTCCGAAGGTGAGGACGACGTTATCAATTCGGAAGAAGAATTCTTCACAGATGAACTTGATTTCGATTACATGGCTGAGGTGGTTAAGCTGCTGGAAGATCATGCTGATGTTAATATGGAAAATTCAATTGCCCTTAATCGAAAGCTACAAGATAAATTGGAAGAATTGCGGCGAAAAGTTATTTCAATGCTCAACAAGTGTCGCGAAATATaccaagaaaatcaaaaaaagctTGAAAATCCTTCGACTATAACGTCCCAGTTGAAAGGAATTGGGAGTTGTGGAAGACCGTTCTTTAAAGACAAAGCTGGAAGATCTTGTCCACCGAATGCCGATTACATATATCGAAGCGAGGTCGAAAAAGAATTCTTTCCCAGCGACTTGGAATTGTATCCACATTTTACCTGGACAGCCAGAGATAAAGTTGGAATACTGCAGGGAATCAAGGAACAGgcTATTGAATACATAGAACGCAAGGAGTCttacaaacaaaacacaacaaaatcaACTCCTTTaagcaaaaatgtcaaaatacacACACTCAAACTCAAAAAACTGCTACAGAAAGTCGATGATGACTTCGATATTGACTGGAATCAAATATCAGTATACAACTTGAATTCCCGTCATACCGCAAACAGTTGCTTGGCCAGTTGGAATGCTTATCTTAAACCAGAAATCAGTGGTGATGAATGGACAGacgaagaaaatattaaactaaACGAACTGGCAAAGAAATATCAATTTCAAGATTGGATTGCCATAGCTTCGGAAATGCCACACAGATCTGACTATCAATGCTTTGTTCAATATCAAACTGTGGTTTCGGTAAAATTGCGAGAAGATAAAGGTGAACGTTGGACTAAAGAAGAAGATGATACGTTGTTATCACTGGTTGAACAAAATCGGATGGGCAATGTGATTAGATGGAATCCGATATGTTCACAATTTCCGAATCGGACAAAAAAGCAGTGCTTTGCTCGATGGAAATATAGTATTAATCCAAACATTTCAAGAGcaTTATTTACTCCTGAAGAGGATTGTGTAATTCTTGCTGCTGTAGAAGAATTCggagaaaatttcaattgtttccCCAAGGATCTCTTTCCAAATCGAACTGTCGTACAAATCCGCAACAGATACAATAATTCCATAAAATCTCGCGGTACAACCAAGCATTGGTCTCCAGAAGATGATAGATTGCTTCTAGACCTCATAGCTAAATACGGGGAACACGATTGGAAAAATATATCCGAGTCAATCAAATATCACACTCGAACCAGTTGTCGCACTCGCTAtttaactatttcaaaatttttcaaagaaaatcccAATGCAACTCTTGAAAATATTccaagaaaaaaacgaaaatctcTATCAAATGTTAATAAGAATAATTGGGTAGCAATAATAACTGAAACCACAGCAGAACCCAACGAAGAAATCAAAGATGTATATCGTTCTAGATTGCGCCAAAACGAGCTAAActggtataattttttaaaatactcatATGACTTTAAATTCGGCGAAGGCTATTGCCAGGTGCCTAAATATTTGATAAGCTTGGAATTTGTCCGGCATGTTTTCGATTGCAATTTGAGTTTGCCAGTTGTTTTGCAAAGAGGCTATTCGAAAGGATTCGTTGCGGTAACTCTAACCAAACTTGTACGGCTACATGAGCAAGATGATAAAAGTTTAGTGTTCGAGAGACCTAATGTAGGTTTTAAACTGCCACCAAGCTATTGTTCTCTTTTAGCTTTTCGAGGACTCTGCATACAGGCTTCTTTTAATGATAACCAAGATAAAAGTATTACAAGTACAAATCAACTTCCTGCCAATGCGATTGAAGCGAGAAAAAAGTTTCGCCAGCGACTTATCAGCCTTTTATACAAAACAACTCTTCTTAGCCGTTTAGAACCTAAGACATGCATTGAGCATAATACATTCGaagtaatttttaatacaaacacAACATTTGGTCAGGCTGCAAGTATAAATTTGGCCGAACTCAAGGTTGCTCAGATGaataaaattgctgaaaatCTTCGGATTGCTCAAGAAAAAGCAGACAACAAtcgaaaatataaagaaaaaataaaaaggaaactGAAAGAGCATCatgataaaaaaacaacaacaatgcagAAAAGTCTGAACAGTAAAAAAGATGACATCACAAAGAAAGTTATTAAGCCAGAATTTAAACAtccagaacaaaaaaatgaattttcggatattttcaacaaaacaacaattgggaaaaaagaacaaaaactaaaGGGGGAAGAGATTTCTATGGAGTTAGATAATTCATGCCCAGAACAAGCTGGAGAGATTATAACAGACTTAGAAAATGCTTCTCAATCGAAGGTATTAGAAAAACCCAGAAATTGTACATTAGAATTGGTTGATATGCCTTCTCTAGCGATAACAGAAGAATCAAATGTTTATGAAACGCAAGACGTTATGAATTCAATTAAAGGGACCAAGTTACCTTCCAAGTATAAATCTTTTGCTACGCAAAAAGCTAATAATAGGAAAAGAACATTTGACGAGAGCTTCGTAATTTTGGAAGAATCTTCTGAATCTTCGacatttgaattaaattctCAGATAAATAGAATTAAACgcgaaaaagaataa
- Protein Sequence
- MSTKQSRGAKAYEVQKGYLLNFLEGRPDLAADKFVNADGSHTRDREWSESTTQTLNSPGGAIKDGPKWRKYWRDLVNNVRAKDSSIKEELLRSGINGFVKIKSLIDSEKRIISIITPESVEGVSHSVDEMGFEPIVAQNIDFEVSGPFVSDGIMRTTTVLFGPVDLEPQPEPEPALYMKTIVLSWWKSNGVTSNSEFDTMSSQKKKPKLTAQKTNIQSETSDNDSFSEAEDCDDDDNDDETSEGEDDVINSEEEFFTDELDFDYMAEVVKLLEDHADVNMENSIALNRKLQDKLEELRRKVISMLNKCREIYQENQKKLENPSTITSQLKGIGSCGRPFFKDKAGRSCPPNADYIYRSEVEKEFFPSDLELYPHFTWTARDKVGILQGIKEQAIEYIERKESYKQNTTKSTPLSKNVKIHTLKLKKLLQKVDDDFDIDWNQISVYNLNSRHTANSCLASWNAYLKPEISGDEWTDEENIKLNELAKKYQFQDWIAIASEMPHRSDYQCFVQYQTVVSVKLREDKGERWTKEEDDTLLSLVEQNRMGNVIRWNPICSQFPNRTKKQCFARWKYSINPNISRALFTPEEDCVILAAVEEFGENFNCFPKDLFPNRTVVQIRNRYNNSIKSRGTTKHWSPEDDRLLLDLIAKYGEHDWKNISESIKYHTRTSCRTRYLTISKFFKENPNATLENIPRKKRKSLSNVNKNNWVAIITETTAEPNEEIKDVYRSRLRQNELNWYNFLKYSYDFKFGEGYCQVPKYLISLEFVRHVFDCNLSLPVVLQRGYSKGFVAVTLTKLVRLHEQDDKSLVFERPNVGFKLPPSYCSLLAFRGLCIQASFNDNQDKSITSTNQLPANAIEARKKFRQRLISLLYKTTLLSRLEPKTCIEHNTFEVIFNTNTTFGQAASINLAELKVAQMNKIAENLRIAQEKADNNRKYKEKIKRKLKEHHDKKTTTMQKSLNSKKDDITKKVIKPEFKHPEQKNEFSDIFNKTTIGKKEQKLKGEEISMELDNSCPEQAGEIITDLENASQSKVLEKPRNCTLELVDMPSLAITEESNVYETQDVMNSIKGTKLPSKYKSFATQKANNRKRTFDESFVILEESSESSTFELNSQINRIKREKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -