Svit016975.1
Basic Information
- Insect
- Syrphus vitripennis
- Gene Symbol
- kn
- Assembly
- GCA_958431115.1
- Location
- OY288109.1:50908695-50910382[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.4e-50 1.3e-46 160.2 0.0 44 136 12 104 7 108 0.96
Sequence Information
- Coding Sequence
- ATGCTGGAGATTCTTCCGTGCCCActcaaaagcCTCGGAATCGGTCGGGCGCACTTCGAAAAGCAACCTCCGAGTAATCTGCGTAAGTCAAACTTTTTCCATTTTGTGATTGCTCTATACGATCGAGCTGGGCAACccattgaaattgaaagaaCGGCTTTCATCGGTTTTATTGAAAAGGATTCTGAGTCAGATACGACGAAAACAAATAACGGCATCCAATATCGCCTTCAGCTACTTTATGCAAATGGTGCAAGGCAGGAGCAGGATATTTTTGTTCGACTTATCGATTCGGTCACAAAACAGGTAAGAATAAAGACATTCGCATTCAAGTTGTAA
- Protein Sequence
- MLEILPCPLKSLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPIEIERTAFIGFIEKDSESDTTKTNNGIQYRLQLLYANGARQEQDIFVRLIDSVTKQVRIKTFAFKL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00553543;
- 90% Identity
- iTF_00081930;
- 80% Identity
- -