Svit016916.3
Basic Information
- Insect
- Syrphus vitripennis
- Gene Symbol
- kn
- Assembly
- GCA_958431115.1
- Location
- OY288109.1:50561292-50563354[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-95 1.1e-91 309.0 0.1 245 385 76 217 67 220 0.95 2 2 3.8e-11 3.6e-07 30.0 13.1 422 514 220 315 216 332 0.78
Sequence Information
- Coding Sequence
- ATGCCAGGTGAACCAAACGTTGGATATCTGCTTGGAACTGCTGGAGTGTTTCAACTCTTTTGTGCACTCTACTGTATAGCTGCACTCGGAAGACTTTTTGTGGCTATATCTAAAACGCTGTTCAATTGTCGTTACGAGAGCACTGACGTCATCACTCTTTTCAGCTGGGTTTGTTGTAGCAGTTCTGCAGCTGATCCTCTCCAAGCAAGCGTGAGTCgACTCTATCCACCCCTACCTGTCGCAACACCTTGTATAAAAGCAATATCACCTAGTGAAGGTTGGACCACTGGCGGAGCCACGGTAATCATTGTTGGCGACAATTTCTTTGATGGCCTTCAAGTTGTTTTCGGAACCATGTTGGTTTGGAGTGAGCTAATAACATCACATGCAATTCGAGTTCAAACTCCACCACGGCATATTCCAGGTGTTGTAGAAGTAACACTTTCATATAAAAGCAAGCAATTTTGCAAAGGCTCCCCAGGAAGATTTGTATATGTCTcaGCTCTCAATGAACCAACAATAGACTACGGATTTCAGCGTTTGCAAAAGCTCATTCCCCGTCACCCTGGTGATCCAGAAAAACTACAGAAAGAAATTATTCTAAAACGTGCCGCCGATTTAGTTGAAGCTCTCTATTCAATGCCTAGatCTCCCGGAGGAACGACAGGATTCAATTCATACGCAGGCCAATTGGCCGTCAGTGTTCAGGATGGAAGTGGCCAATGGACCGAAGATGAATACCAACGAGCGCAAAGTAGTAGTGTGAGTCCTCGTGGAGGCTATTGTAGCAGTACTTCAACTCCGCATTCGTCAGGGGGTGGATCATATGGGGTAACTGCTAACGGTTATGGACCAGCACCAAATATGGGAGCATTGTCATCATCGCCTGGGAGTGTGTTCAATTCTACATCCACTAGTGCCTTTTCGCCATTAATTTCAACAGTGACATCTCCGTGGCATCAAGCTCTGGCAcaacatcatcaccatcatcactcACATCCGCATCATCACCATCTTTCGCATCACCCTCATCAACTTTGGCATAATCCAACCACGGTATCTGCAACGGCAGCCGTTTAG
- Protein Sequence
- MPGEPNVGYLLGTAGVFQLFCALYCIAALGRLFVAISKTLFNCRYESTDVITLFSWVCCSSSAADPLQASVSRLYPPLPVATPCIKAISPSEGWTTGGATVIIVGDNFFDGLQVVFGTMLVWSELITSHAIRVQTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYVSALNEPTIDYGFQRLQKLIPRHPGDPEKLQKEIILKRAADLVEALYSMPRSPGGTTGFNSYAGQLAVSVQDGSGQWTEDEYQRAQSSSVSPRGGYCSSTSTPHSSGGGSYGVTANGYGPAPNMGALSSSPGSVFNSTSTSAFSPLISTVTSPWHQALAQHHHHHHSHPHHHHLSHHPHQLWHNPTTVSATAAV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- iTF_01002550;
- 80% Identity
- -