Spip012308.1
Basic Information
- Insect
- Syritta pipiens
- Gene Symbol
- bsk
- Assembly
- GCA_905187475.1
- Location
- LR994571.1:73226413-73272959[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.29 1.1e+03 -0.6 0.1 11 19 307 315 303 317 0.84 2 2 2.4e-17 9.3e-14 50.9 3.1 1 35 557 590 557 591 0.98
Sequence Information
- Coding Sequence
- ATGACACCATACGTTGTTACAAGGTATTATCGTGCTCCGGAAGTCATACTGGGTATGGGATACACAGAGAATGTTGACATTTGGTCCGTCGGTTGTATAATGGGAGAGATGATTCGTGGTGGTGTTTTGTTTCCTGGTACTGATCATATTGATCAGTGGAACAAGATTATCGGCTCTCCCGCTACTTCAACCTCAGCTCCTGAAGTGCTGACAACTAGTGCTCTGGCGACCAAACCTGGCACTAGCAATGTCAAGAGCCGCGTGGAGCCCCTTACTACTTCAACCCCATCGTCTACCTCGCTGACAACTAGTGCTCTGGCGCCCGAACCTGGTACTAGCAACATCAGCAGCCGTGAAGAGCGGCCTATCTCTTCAACCCCATCCCTCGCTGTGCTGACAGCTAGTGCTTTGGCGCCCGTACCTGGCACTAGCAGCAGCCGCGTGGAGCCCTCTCAGACTAAAACCCCGAGTTCTGCCATGCTTGCAGCTAGTGCTTTGGCGCCCATACCTGGCACTAGCAAAGCATCTTCTAAGGACTCACGCTTGCCATCTCGAGGTGCTGTTAAGGCCACTCGAGGCATTGGCCCCTCCAACTCTGTCTACAAGGCACGTAGAGCGGCAGCGCGGATCCTGGAGCGTTTCAAGGGCATCAACCCTGATCAGCTCTCGGACCAAAGAAAGAAGTCGCTCGCCTGGGCAACTGAAGTTGCCAGTGCAGTTCCTGCGGACCCCAGGTCTAGTGACTTCACGTCCAAGAGGCAAAGGTCTGCGGAGGAGTCCTTAACGGACCCCAAAAGGATGAAGGCCAGCGGCGGTAGTTCCGTTCCAGCTGGAACATCCTATAGTGAGATGCTCAAGGGTGACATCGTCTTGGCTGTCATCGACCGTAATGACATCGACGGTAGCATCTCCCCGGCGAACTGGAGGAAGGATCCCCGAAATTCTTCTCACACACTTAACAAGCTACTTAAACCATTTACCGTACGTAAGGCATCGGAAACGATGGCGGCCACAGCTTTAACCGAACTCAGCAAACCTTCAAACAACAATAAGCGCCAAAATTTAAGCATAGATCATTCAAAACCCATAAAGAGTATTAAACTGCCACAGATTGGCTCAGATGAAAGTTCCGATTCGGGGAGATTACATATGGATATTGGAACTTTAGAGATAGAAGAAGTCGATCGTCCGTCCAGAGGCAAGGCAACCACATTCGATGGTTTAATTGAACGTCACTCTTTAGATAGTATATCATCAGAGGATCATGGTACTGATCCGGCTACAACTCAGCTATGGCAGGCCTTAGCTCATACTGCAGTGAATGGAGAAGAAAATCATGCCACACAACTATTTCGACAGATGATAAACTGTAGATCGTTTCCGTTTCCTCTGCCTGCTGTAGGCGATCAGGCCAATAATGCCGGAGCCGAGGAGCCTATAGCTTTGCTCAAGAACAACCCGTCAAAAGAGAAAATGTCATTTAAAATTGGTCGCAGGAAACAAGCATGGCCCAGTAAAGCTGATTCTAAAGATTTTCTTGAGAACGCTGGTCATTCCTTTAAGAATCAACATCGTGCTGATGATAATACTGATCGATCTAATAATACTGCGAGTGATAAATCAAAGACCAAGAGCTCAAGCTTTATTAGCAGCCAGAAAGATATGTCTTGTTCCAATTGTGGCACACTTACAACAACAATTTGGAGAAGAAATGTACGCGGTGAAATGGTCTGTAATGCGTGTGGACTTTACTTTAAGTTGCATGGCGTTAATAGGCCGCATTCTATGCGACGGGATACGATTCATACGCGTAGAAGGCGACCTAAGGGCAGTGATATGAGTGGAAGAAAAAGAAATAAAATAGCTCCGAAAAGCTCATCAGATGTTGACACTCCGCAAGATAATGAGGGCAAAGGTGAATTAGTTTTAGCGAAAAATAACAGCTTCTTCATGACCATGGGCAGTAATAATAATCCCAACAGCGCAGCTTTTCCCCCACAAGTAAGTATTTCATCATGA
- Protein Sequence
- MTPYVVTRYYRAPEVILGMGYTENVDIWSVGCIMGEMIRGGVLFPGTDHIDQWNKIIGSPATSTSAPEVLTTSALATKPGTSNVKSRVEPLTTSTPSSTSLTTSALAPEPGTSNISSREERPISSTPSLAVLTASALAPVPGTSSSRVEPSQTKTPSSAMLAASALAPIPGTSKASSKDSRLPSRGAVKATRGIGPSNSVYKARRAAARILERFKGINPDQLSDQRKKSLAWATEVASAVPADPRSSDFTSKRQRSAEESLTDPKRMKASGGSSVPAGTSYSEMLKGDIVLAVIDRNDIDGSISPANWRKDPRNSSHTLNKLLKPFTVRKASETMAATALTELSKPSNNNKRQNLSIDHSKPIKSIKLPQIGSDESSDSGRLHMDIGTLEIEEVDRPSRGKATTFDGLIERHSLDSISSEDHGTDPATTQLWQALAHTAVNGEENHATQLFRQMINCRSFPFPLPAVGDQANNAGAEEPIALLKNNPSKEKMSFKIGRRKQAWPSKADSKDFLENAGHSFKNQHRADDNTDRSNNTASDKSKTKSSSFISSQKDMSCSNCGTLTTTIWRRNVRGEMVCNACGLYFKLHGVNRPHSMRRDTIHTRRRRPKGSDMSGRKRNKIAPKSSSDVDTPQDNEGKGELVLAKNNSFFMTMGSNNNPNSAAFPPQVSISS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -