Spip018975.1
Basic Information
- Insect
- Syritta pipiens
- Gene Symbol
- gata4
- Assembly
- GCA_905187475.1
- Location
- LR994572.1:76237041-76253937[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.2e-17 4.7e-14 51.8 3.7 1 34 179 211 179 213 0.97 2 2 2.1e-21 8.3e-18 63.8 4.2 1 36 233 267 233 267 0.97
Sequence Information
- Coding Sequence
- ATGGATTTAAGATTCATGGATGTCATGGAGCGATGCTCAGTCTACGCAAGACCCCTCCTATCGTCGGCTGCGAATGGCATGCAGTACCTGAACGCCAGCCCGACACACGACGGATCACACATGTGGTCTGGCGGATCGTCGAGTCTCATACCTGGAAGCGGCAGCGGCGGCGGTACCAGCACAACACCCGACGAGTATGGCTCGACGAAGAGCGGTGGAGGAACGCTACCAGCGTTTCAGCGTATCGCGTCCGGTGGCAGTGGGAGTTTCAGCACGTCTGCCGGCGCTCGTGGGGTGAATCCATACCCGGGTCTGGGGAGCTTCCGTGGACAGAACGATGGCGGATGGCAGTCGCACTATGAGCCAACAAATTCAATTAGCTACGCCACCGCGGCGACCACCATCTCTGGGGCTATCAGCTCGAACCCGAACTCTCGCGGACGGACCACGAGTGATTCAGCGACTCATCTTCCAGCGTCGGCGTCGTTATCAGCAACATTTTTCGACGCCGATTTTTTCACTGAGGGGCGTGAATGTGTCAATTGTGGTGCTATATCAACCCCATTATGGCGGCGCGATAATACCGGACACTACCTTTGCAATGCATGCGGTCTCTATCATAAAATGAACGGAATGAATCGACCGTTAGTTAAACAACCTCGAAGATTGAGCGCCTCACGTCGCGTCGGACTCTCCTGCTCGAATTGTCACACCACGCAGACGTCACTCTGGCGACGCAACCCGAACGGTGAGCCAGTTTGCAACGCCTGCGGTCTTTACTTCAAGCTACACAGCGTCAAGAGGCCGTTGGCCATGAAGAAAGACACGATCCAGACCCGCAAGCGAAAGCCAAAGGGAAGCAAAAACTCCGACAAGTCATCGTCCTCAGCGGGCAACAACAGCAAGGCCTCGAACAGCTCCTCGACGGGGACGCTTCAGGAAAGCACCAACGAGCTAAAAAGCCTCACATCATCAATTCAACACACTAGTGCGTTGAACCATTCAACGGCCAGCAGCAGCCCGACCACCATCACCCCACCACCACCGCTGGCACACACGCCGACGACGTCATCGGCCTCGTCCCACCACCAGGCCGCCACGCCCGCCCCGCCATCGCCACCGATCAATCAGCACGACAACATGTCGCCACTGCACTTCACCTCCGCCTCACTCCTCAACGGCTCGGTCCTAACCTCCACCCCGACCCCGACCAACAACAACAACAACTCGACGAGCCTGGACAATAACATCATGCTCCCCAAACTGTTGAACTTGCAGAAGTACATCTCCAGCCAACACGAGCAACAACAGCAGCAGCAACAGCAGCACCTGATGACCTCTGGAGGCCATCAAATGCTTCGGATGTCGCCCTCGCCGACGGAACAGCCCCACCACGGCTACAGCCCCCAGCAGTCGCCGAACTGCTTCTACGACACGCTCACCCACGGCGACGCCATCAAGATGGAGAACCTCCACCACCACCCACACGCCTACCAGCAGCAGCAGCAGCAGCAGTACCACCACCACGCGTCTGACTCACAGATCATCCAGCACGCCATGAGCCGGAGCTCCTCCATCGACGACGACTACGACCTGCACCAGCACCAGGCTCAGCAGCACGACCAGCACCAGCACCAGCAGCACATCATCCAGATGAGCAACCTCATCCCGTTCGCGAAGCTGGAGCAGCTCGATCGCTCCACTGTCGTCAAAATGGAGTGA
- Protein Sequence
- MDLRFMDVMERCSVYARPLLSSAANGMQYLNASPTHDGSHMWSGGSSSLIPGSGSGGGTSTTPDEYGSTKSGGGTLPAFQRIASGGSGSFSTSAGARGVNPYPGLGSFRGQNDGGWQSHYEPTNSISYATAATTISGAISSNPNSRGRTTSDSATHLPASASLSATFFDADFFTEGRECVNCGAISTPLWRRDNTGHYLCNACGLYHKMNGMNRPLVKQPRRLSASRRVGLSCSNCHTTQTSLWRRNPNGEPVCNACGLYFKLHSVKRPLAMKKDTIQTRKRKPKGSKNSDKSSSSAGNNSKASNSSSTGTLQESTNELKSLTSSIQHTSALNHSTASSSPTTITPPPPLAHTPTTSSASSHHQAATPAPPSPPINQHDNMSPLHFTSASLLNGSVLTSTPTPTNNNNNSTSLDNNIMLPKLLNLQKYISSQHEQQQQQQQQHLMTSGGHQMLRMSPSPTEQPHHGYSPQQSPNCFYDTLTHGDAIKMENLHHHPHAYQQQQQQQYHHHASDSQIIQHAMSRSSSIDDDYDLHQHQAQQHDQHQHQQHIIQMSNLIPFAKLEQLDRSTVVKME
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -