Basic Information

Insect: Syritta pipiens
Gene Symbol: Zbtb41
Assembly: GCA_905187475.1
Location: LR994573.1:57658304-57660383[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.12 13 6.6 0.6 1 23 177 202 177 202 0.85

2 13 8.7e-05 0.0091 16.5 1.4 1 23 208 230 208 230 0.98

3 13 4.9 5.2e+02 1.6 0.4 3 9 237 243 236 246 0.88

4 13 0.15 16 6.4 0.6 2 16 265 278 265 280 0.77

5 13 9.6e-05 0.01 16.4 4.8 1 23 294 316 294 316 0.98

6 13 9.2e-06 0.00097 19.6 0.1 1 23 322 344 322 344 0.97

7 13 1.6e-06 0.00017 22.0 1.8 2 23 350 371 349 371 0.96

8 13 0.0068 0.72 10.6 2.9 2 23 379 401 378 401 0.91

9 13 8.1e-06 0.00085 19.8 3.4 1 23 426 448 426 448 0.99

10 13 1.8e-07 1.9e-05 25.0 2.3 1 23 454 477 454 477 0.98

11 13 0.00061 0.064 13.9 0.4 1 23 483 506 483 506 0.92

12 13 7.7e-06 0.00081 19.8 0.2 1 23 512 534 512 534 0.98

13 13 5.9e-06 0.00062 20.2 1.2 1 23 541 563 541 563 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.12	13	6.6	0.6	1	23	177	202	177	202	0.85
2	13	8.7e-05	0.0091	16.5	1.4	1	23	208	230	208	230	0.98
3	13	4.9	5.2e+02	1.6	0.4	3	9	237	243	236	246	0.88
4	13	0.15	16	6.4	0.6	2	16	265	278	265	280	0.77
5	13	9.6e-05	0.01	16.4	4.8	1	23	294	316	294	316	0.98
6	13	9.2e-06	0.00097	19.6	0.1	1	23	322	344	322	344	0.97
7	13	1.6e-06	0.00017	22.0	1.8	2	23	350	371	349	371	0.96
8	13	0.0068	0.72	10.6	2.9	2	23	379	401	378	401	0.91
9	13	8.1e-06	0.00085	19.8	3.4	1	23	426	448	426	448	0.99
10	13	1.8e-07	1.9e-05	25.0	2.3	1	23	454	477	454	477	0.98
11	13	0.00061	0.064	13.9	0.4	1	23	483	506	483	506	0.92
12	13	7.7e-06	0.00081	19.8	0.2	1	23	512	534	512	534	0.98
13	13	5.9e-06	0.00062	20.2	1.2	1	23	541	563	541	563	0.98

Sequence Information

Coding Sequence: ATGAATGCAGTGGAAAATACCTGTAGAACTTGTGGAAAGTTATCAGAACAGGAAGATGGAGCTGACCTCTACCCAATGTATACTTCGACAGAGTATTGCCATGAATTGAAAATGATCCAAGAGGAGTTCGAAATATGGAATCTAAATATTTCTCAGGGCGATGGCTTACCTCAAAAAATATGTCTTACATGCTTCGATAGCTTCTGCCAAATTCACAATTTCCGGATGATTTGCCAAGAAGCTCAAATGAATTTTGGAGAGCTATGCACTGGGCTTGACATCATAATCAAGCTTGACTCGAATTTCGATGGGACCGACGTTGACTTCCCAGAAGATTATGAAGGTGAGCAAACGATAACTGTCCAAGAGCACTATCGGTTCCCTGGTGATCAGCAATCAAAGAATTCAGAGTTGGAGATGGAGGACGAATTATTACATGCCGACTCTGTAGATTTGAAGGAAGAGGTGGGCGAAGATGGGAGCTCTCAGGTCAAAGGGAAGATTATCGGCCTCCCTGAAATTAAACGATTTCAGTGTGAGTTTTGCATGGATTTTACCAGCTTTGATGACCCCGAGATGCTCAACAAACACTATAACATCTTCCACGCGTCGGATACACCTTACCCATGCCCTAGATGCGATAAGTCATTCAATAAAAAAAACAAGCGAAACAGTCACGCGAGAGTCCACTTCCCTGTTGTTGTTGATTGCGAAATTTGCGGCAAGAAAATACGGGGTGGCAGGCAAATGATGGCTCAGCACAACGAGTTGCATCACATCGAGAAAGATCGAGAGTGCACGACCTGTGGAAAGAAGTTCCACAACATCACGTTGAAGAGATTCAATTACCACTTGAGCTGGCATGATGAGTCTAAATTACACAAGTGCAAGTATTGCGAGAAGAAATTCATTCAGATAAATCATCTGGTGGTCCACGAGAGAACACACACTGGAGAAAGTCCTTTCATCTGCAGCGAGTGTGGAGCTGGATACAAAAACTCCGGTATGTTGAACAATCACATGAAATTGCACGGAGCGAGGGAGTTGGAGTGTCCCGAGTGTGACAAAAAATTCTACTATAGTCACGGCTTAAAAAATCACATGAAACTCCATGATCCCAACAGAAAGCTCTTGCATTGTGAATTCTGTGACAGACCTTTCAGTACCGCGACAAGTCTGGCCCTGCACAATCATAAAAGGCACGGTGAACCGGCCACGCCAACAGTTCTTGCAATTCTCAAAAAACGCGAGATAAAAAGGCCTTACTTACGACCATACAAATGTGGAAAGTGCACAGAATCGTTCCCAACGCATAAGCAGTTGGTAAAGCATCTAAAAACCCATGACGAAAACAGACCTTACAAATGCGACCGCTGTGGCAAATCGTTTAAGAGAGAGGCACATTTGAAGCTACACATCAATTCGTTGCATTTAAATAAAAAACCCTTCAAGTGCACGATGTGTGACTACGCCTTCACACAAAGGAACATCTTGAGGGAGCACATTGCTGCGAGGCACGAAGATAAGAGGGATTTTAAGTGCGAGATTTGTGGAAAAGGATTTGCAATTGCCAAGACGCTTAGGACTCACGTGATGAGGCACGGCATAGAGAAAGAAATATTCACCTGCAAAGTGTGTAGGAGGAGTTTCAGACAATTGGGCGTTCTTAAGTGGCACATGAACTCCCACAAAAACCAGATTAAGGTCGAAGCCGCTGGCGAAGAGACCGAGGCTGACATTGCTGCCCGAGAGATTGTGGATATAGTTGTCGATCAACAATATGAAGTTTAA
Protein Sequence: MNAVENTCRTCGKLSEQEDGADLYPMYTSTEYCHELKMIQEEFEIWNLNISQGDGLPQKICLTCFDSFCQIHNFRMICQEAQMNFGELCTGLDIIIKLDSNFDGTDVDFPEDYEGEQTITVQEHYRFPGDQQSKNSELEMEDELLHADSVDLKEEVGEDGSSQVKGKIIGLPEIKRFQCEFCMDFTSFDDPEMLNKHYNIFHASDTPYPCPRCDKSFNKKNKRNSHARVHFPVVVDCEICGKKIRGGRQMMAQHNELHHIEKDRECTTCGKKFHNITLKRFNYHLSWHDESKLHKCKYCEKKFIQINHLVVHERTHTGESPFICSECGAGYKNSGMLNNHMKLHGARELECPECDKKFYYSHGLKNHMKLHDPNRKLLHCEFCDRPFSTATSLALHNHKRHGEPATPTVLAILKKREIKRPYLRPYKCGKCTESFPTHKQLVKHLKTHDENRPYKCDRCGKSFKREAHLKLHINSLHLNKKPFKCTMCDYAFTQRNILREHIAARHEDKRDFKCEICGKGFAIAKTLRTHVMRHGIEKEIFTCKVCRRSFRQLGVLKWHMNSHKNQIKVEAAGEETEADIAAREIVDIVVDQQYEV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -