Spip012964.1
Basic Information
- Insect
- Syritta pipiens
- Gene Symbol
- CSRNP3
- Assembly
- GCA_905187475.1
- Location
- LR994571.1:83191433-83194237[+]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.21 4e+03 -2.4 0.6 80 111 61 98 25 107 0.49 2 3 2e-94 3.9e-90 301.7 6.9 2 218 268 468 267 468 0.92 3 3 0.2 3.9e+03 -2.4 5.5 50 103 755 810 731 829 0.41
Sequence Information
- Coding Sequence
- ATGTTCACACCTATAAAAAATTTCATCACATACATACAGAAAAATGCAAGTGGATCAACGTTTTTTGGAGGAACCTCATCGAATGCAGAAGTAAACGAAAGCAGCATTATGGAGAGTGAATTGGTAGACACTAATTCGAATGTTAATCAAGCACCGCTGAGGAGATTGGTAACTCCCATGAGTGATAAGAATCATGATCAAAACGAGAATGAACTTCTCGAAGATAGCGCGGAGGTAGATTCCTCCGCTGATGATCCTTTGATGATCAACGACGAAGAGGAGGAGAAAGATATTTTTCTAGATTTCCCTCCTGCTGTTGAGAGCGACGAGATTGATGTAGTCTTTCCCACGAGTGAAGTGGTGGTGTTAGATGATCCTGATTTGAATACATCAATCAATTCTGAACCCGGAACGGATCCTCTCGCCATCGATGAGTGCAATGGTCATTTGATGGTGAACCCATCGAATCTGTTGGATTCATCTGGAGATGGCGACATGGTTTATATGGTTGAAGTGCGGAAGATCGATAGTGGGATTCCGCATGCGAAAGATGAATGCGGTGAAAGCTCTAGAGTCTTGGCGACTGAGAAATCTGTCGATGAGCAAGAGCTCCGCAGTGACGGCTCAGATTCCGGGCTGGGCTCTGAGACGTCGACCCTGCAGTCGACTATGACGAGTGTAGTTGATACCAGTGCTTGCTCAAATAGCAGCCCACCGACGAGCTTACCTAAAATCCCAATGCGATCGAATTTAAAGCGACGCCTTCAAAGTGTCGACGAAAGCCAACATATACAGAAGAAACCTAGACGATCGATAAATTTCGACGGCGTCAAGGTGTATTATTTCCCTCGAATCCAGGGCTACGGATGTGTTCCCTCGCAGGGTGGATGCACTTTAGGCATGGCTGCTCATCACGTCAGTTTTAAGACATTCAGCTTAGCTGAACACGCGGCCGAGCTCAGGCGAGCTCACAAACTACAACTGCAGGAAATAAATCCGCGGGGATCTTCTAGCGAAGAGTCTGACAGCGACGAGGAGATAAGTGAAGCGAGCGGATCGGACTTGGACACGGAGACGAATGGTTTTCTACAACCGGTTTCACCAAAACAAAGACGAGCGCTGTTGAAAGCAGCTGGAGTGCGAAAAATTGATCCTAACGAAAAGATTGAGTGCCGTGACATCCGAAATTCGCGAGAGGTCTGCGGATGTGTGTGCAGAGAATTCTGCGATCCTGATACGTGTGCCTGCAGTCAGGCTGGAATCAAATGTCAAGTCGATCGTGCTATGTTTCCCTGTGGATGTAATCGCGACGCTTGTGGCAACGTAATTGGTCGGATCGAGTTCAATCCAGCGCGAGTACGGACTCACTTCATCCACACAATTATGCGATTGGAAATGGAGAAGCGTCAGCAAAAACGCTCCGAGGAACTGGCCGCAGGGTCAGCGTCTCACATGGTTTACAATAACGTCCCCGCAATGGACAACAGCACAACAAGCATACAATGCTACAACACAATACCCAGCTACGGTCTGGAACAAAATCCAACATCCGTGGCTCTTGGCTACCACCATCACCAACTGCACCAGCAGCACAGCACGTATATGAATCACATGCCGCCAACGCACCCTGCCAGCAACGTGTATGCCAATCTGTCCAATCCTATGGTGCTGGAATCGCCAGCCACAGCAACATTACCACTACCACAATCGCACAACCACTATGTCAATGCCACCGCCACGGAACCAGACAGCATTAGCAGCAGTCTCTCAATGAACGGCGCCAACCTACACTATCAGGATGGGTCGATGTATCCACCAGTTCAGCCGCCACTGCAACCGCCACCTGCCACGGCATACGGCGACATACTAGCACCTTATGCCACTTCCGTACCATATCACGCAGCGCAAGTGGTGGAAACGAACTACCCTGCCAACGTGTACAACAACTACCACAACCCACATCATCTTCACAGTCACTTACAGCAGCAGCATCAGTCTCAGTCGCAGTTTCTGGGCTATCCCACCAGCAATGGCGGCGATATGGCAGACTACAACGAGTCCCAGAGCAGCTTCATTAATCTGAATGATGCGAGCTCTTCCAGGCTCTCGGCTATAAATGATCTTTTGCATAACAATAGGAATACAACGGCAGCGTTGGTAGCTGTGTCAGAGGAGGCCCCGAGCATGCCAACTTCAGCGGTACAGGAGTCTCTGTCCTATGCATCGAATGACACGGCTTTAGTGGAGGCCGCCATCGAAGAGAAAAGCCAAGAAGAAAATGTTCCAGATGTGAGTGATGAAGAAAAAAACAATGGAAAAGCGAAAGAAGAAACAGCCGACGACGAGGCTCCACCTGCCGAGATTGAAGAAGAATGTGATGAGAAAGCAACACAGGAAAAAAGTGATTCAGTGAAAGAAGACCAGGCAGATGAAGACGAAAAAGTCGAAGAAGAGAAAAAACCTGAAACCTGTCAATTGGTGCTCATTGGACCATCCGAGCCGGAGCTGGTAATAGAAGTAACAACCTCAACCGAAACAGGGTCAGAGGACGCATCAACGACGCCAGAATCGTGCAGTGATATTGCTGCCAGCCAAGAGGACGCTGTCATCAAGCCAATCAGCACCGAAAATGGGCCTCCCAACTTAGTTCTAGAAGACGATCCACCTGCAACCACCACAACAACCGAAACCGAAGAAGAACGCATCACCGATAATCTTCCTCCTATCGTTGAAACTGTGTCAGCTTAG
- Protein Sequence
- MFTPIKNFITYIQKNASGSTFFGGTSSNAEVNESSIMESELVDTNSNVNQAPLRRLVTPMSDKNHDQNENELLEDSAEVDSSADDPLMINDEEEEKDIFLDFPPAVESDEIDVVFPTSEVVVLDDPDLNTSINSEPGTDPLAIDECNGHLMVNPSNLLDSSGDGDMVYMVEVRKIDSGIPHAKDECGESSRVLATEKSVDEQELRSDGSDSGLGSETSTLQSTMTSVVDTSACSNSSPPTSLPKIPMRSNLKRRLQSVDESQHIQKKPRRSINFDGVKVYYFPRIQGYGCVPSQGGCTLGMAAHHVSFKTFSLAEHAAELRRAHKLQLQEINPRGSSSEESDSDEEISEASGSDLDTETNGFLQPVSPKQRRALLKAAGVRKIDPNEKIECRDIRNSREVCGCVCREFCDPDTCACSQAGIKCQVDRAMFPCGCNRDACGNVIGRIEFNPARVRTHFIHTIMRLEMEKRQQKRSEELAAGSASHMVYNNVPAMDNSTTSIQCYNTIPSYGLEQNPTSVALGYHHHQLHQQHSTYMNHMPPTHPASNVYANLSNPMVLESPATATLPLPQSHNHYVNATATEPDSISSSLSMNGANLHYQDGSMYPPVQPPLQPPPATAYGDILAPYATSVPYHAAQVVETNYPANVYNNYHNPHHLHSHLQQQHQSQSQFLGYPTSNGGDMADYNESQSSFINLNDASSSRLSAINDLLHNNRNTTAALVAVSEEAPSMPTSAVQESLSYASNDTALVEAAIEEKSQEENVPDVSDEEKNNGKAKEETADDEAPPAEIEEECDEKATQEKSDSVKEDQADEDEKVEEEKKPETCQLVLIGPSEPELVIEVTTSTETGSEDASTTPESCSDIAASQEDAVIKPISTENGPPNLVLEDDPPATTTTTETEEERITDNLPPIVETVSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -