Basic Information

Gene Symbol
RERE_1
Assembly
GCA_905187475.1
Location
LR994574.1:9500101-9513136[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.8e-08 0.00012 22.3 0.3 2 45 125 169 124 170 0.87

Sequence Information

Coding Sequence
ATGGCGGCCTCCACTCAAGGAGAAATACGAGTGGGTCCCGGCCACCAGGTAAACGATGTCTATGCAAAACTGCCCGATTATAATCCAATTTCAAGTTTTCCCGTTGATAAAGAAATTGATGAGCGTGAATTAGAAGAACCACGATGGAGTCCTGGAATATTGGCCGATGGAGATTTAATAATGTTTGTACGTGCAGCACGTTCCATGGCAGCATTTCAAGGCATGTGTGATGGAGGTTTAGAAGATGGTTGTTTAGCAGCAAGTCGTGATGATACTACAATAAATGCATTTGACGTTTTACACGATTCTGGTTATGATACAGGCACAGCCCTGCAAGCACTAGTTAAATGTCCTGTATCTAAAGGAATTGACAAGAAATGGACAGAAGATGAAACAAAGAAATTCATAAAAGGTCTACGACAATTTGGCAAGAATTTCTTTCGCATACATAAAGATCTATTACCGCACAAGGAAACACCCGAACTGGTTGAATTCTACTATTTGTGGAAGAAAACACCAGGCGCCAATAATAATCGTCCGCATCGTCGCCGACGACAATCATCGTTACGTCGTAATCGTGTAACAAGAGCCAGTAACACGCCACCGAAAAAGGAAGACACACCGGAGCCTCAGGCTGCCACAGAATCACGACCGTCGCCCGTCTCGAAGGAGGAGAATAGCTCACTGACCGAAGACGACGTTAGCGAATGTGATAGTGATTCAAGCTTAACAAACAAAAGGGATGAATCACCATCTAGGATGAGGACACGTAACAAACAGCAGCAGAACAATAATAAGGAACAAGTGGCCAATGGTAAAAGACCGAAACGAGGAGGTACCGAGACACCAGAAGTTACCGATAGCAGCAGTCCAAAAACACCAACCAAAACGGAGAGCAATAATAAAAGAAAGCAGGCGAAACAGGATACGCCTAACAAGAAGAAGCGGTCTGATACAGACGGCGACATCACCGATGATAGTAAGGAGAAGCGGAAGAGGTCGGATAGCCCGGTGGAGAGTATGAACTCGGATAGTCGACCAGATTCGGTGTTGGATGAGGGTGAGAATACGAACGACACCCCAGAGCCGCCGCAGATCGTGGGCAGCGATAGCGTGCCACCGAAGGACGTTGACGAGAAAACGTCAGACGAGAAGGTGACCGCTTCGGCAGCCGAGAACCCGGTAAAGGCAGAGAAGGAGCTGGAACAGGATGAGGAGACCAACCAACAGGCCCCGATTGTGGCGCAGCAGCAGCCGCAGCAGTTGGTTGAGAAGCAGGGATCCAGCGATGATAGTGCTTCGGGTGGCAAACTGTCGCAGCCGTCGGAGGAACCGCTCAACGAGAATGAAACCTCGCAGGAGGCCACCGCGCCGCTTCCTGCCGCTCCTCCGGGCGAGGAGCTAGTTAACAACAGCGGCTACGTTCCCAAGGAACAGGAGATGCTTACGAAGATCGCCAACATGAAGCAGGAGACGAACATCTCACTGCAGCAGGCCACGGCCAATATGGGCGTCCCGCCGCCACAGCCACAGATCGCACCAGCTGGACCGCCGCAGCCACCACCACTGGAGTACTCCCCTAAGGAGGTGTACATCAAGAAGGAGCCGCTGGAAGACTCTTCCTCGATGGACGCCACCTGCAACCAGAACAGCAATGAGCCTCAAGACCTGAAGGTCAAGATCGAGGTGAAGAGCGAAGATGCCAAGCCAAATGTAAATATCTCACCCGCAGGCATGCCAGTCGGGCTGCCAGCATCCACAATAAATCCCCAGGCATGCGTCAGCGAAGCACCGGAGCACAAATACGAGAACCAGCCGCCCCCGTTCGACGGGCACATCAAGTTTGGCAATCCCGGCAGCGAGGTCAAGTACCCCGCGGACATTGAGATGAAGTACAACGATGCCATCAAGTACAATCCGCCAAGCGAGGGAGTGCCGAAGTTCCCGCACGAGATCAAGTACGCTCCGCCCTGCGAGCCGATGAAGTACGGCCAGGAGATGCCGGGCAAGTACGAGCTGAAGTACGGCATTGAACACGGGCTCCCACCGAAGTCATTCAATGAACCCATAAAAATCCCCGATCTCAAGGCATATCAGCAGCACCCGCCGCAGGAGAACCAAATGAAGTACCCGCAGCTTGGCGGCGATCCCAACCAGAATCCAGTTGCCATGCCGAAGCCCCACTACCAAGCTGACGTGCACCCGTTGTCCCGCTCGCCGTATGACTCCAGCATCATGCTGAAGTACGGCGACCCAATGACTGCCAAGTACGGCCTGGGACCGCCGCCCGGCCACCAGCAGCCCCAGGATCTGAAGTATCCTCCGCCAGATGGTGCGCTCAAATCAGCATATCACGGGGAGAACCTCATCAAGAGCAGCCCGTACAGCGATCCTCAGGGAGGCGGCTCCGGCGGGAAGTACCCGCCGTCGGAGAGCCCGATCGACGCGTCATCCAGATCCACCCCCAACCAGGACAGCCAGGGCAGCAACAGCAACTCGCAGCAGTCACAGCAATTCCACTCGCCACACCCCTCACCCCATATGCCTTCAGCTGTGCCCGCGGGCATGCACCCACAGAATTTGGTTTCACAGCATCCCGGGATGCCGCCCAACTCCATGCTGATGCCGCCCTCGTCGGCCCCGAACATTCTTTTGCCTCCCAGCTCGCTGCAGCACATGCAGCCCGGCGGGCCCAGTCACCTTCCGCCGCTGCACCGGCCGCACCAGGACCTCCCGCCGTCGCTGCACCACCCTGGCATCCCGCTCTCGCTGCAGGGGCACGGCGGCCACGGCATCCCGCCGCCGCCACAGGGCCACCACCCTTCCTCCATGCAGCAGCAATCGTCGGCCAATCAGCAGCAAGGCGTCCGCACGCCGTCACCGGCCCAGCAGCGGTCGCTGGACTCGCAGAACAATTCCAACTCACAGAGCAACAACAGGGAACAGCAGATGCAGCAGAGCCAGCCGACACACCGAACGTCGCCGCTGCCGGGCCTCTCGAACCCGCCGCCGGGCATGCTCGGCCATCCGATGCCGCTGCACCCGCACCTGCACATGCAGGGCCACCCAGTCCACCACCCCGGCCACATGATGGGCGGCCCCGGCATGGGTGGCGCCGGCGGACCCGGCGCCCCACTCTCCCTAATCGGTACCTCCATGAGCGGTATCACGGACTCCGGCATCAACCGCCGAACTCCACCAGTGGGTGGCATTCCATCGTCGGTTTCGTCGGCGTCCTCTGCGCAAACCACGACCACGGTGCCATCGTCAGCATTTAGCCGAGCTAGTCCTAGCGTTCAAAACAGTTCAGCACCATCTTCCGGCCCGCAAATGCACAACAACTCGTCGTCTGGATCTTCCTCCCATCGCCCGCCATCGCCGTCGCCGAGTGGAAACAGTATTAGTCGACAATCTCCACTCCACCCAGTGCCACAGAGCCCGCTCGGCCACCACCCGTCTGCGTCGGCGCTCTCCGCAGCCGCCGCGGCCGTGGCCGAGCGCGACCGTCACGCTCTGTTGCGGCAGCAGTCGCCGCACATGACTCCGCCTCCCGTCTCGAGTGCTTCGGCGCTTATGGCCAGTCCGCTCAGCAAAATGTACGGCCCGCAGGGACAGCGCGGCCTGGGCACCTCTCCACCGCCGCACCTGCGCCCCGGGGCATCGCCGCCGGTAATCCGTCACCCGCAGATGCCGCTACCTCTCCCACTGCTGGGGCCCAGCCCGGGAATGCCACAGATCGGCGTCCACCCCGGCCAGGCGCCGTACCCCCACCACCTCTTGCACACGTCGATGTTCTACTCGCACCACCACAATCCGTTTAACTCGCCCTACCCTTACCACCCGTACGGACCCGGCTTCCCAGCGGCCTACATGAAGCCGCCGCCGCCAGCGGGCCCGCTCGATCCCGCCGCGGTCATGGCACACCACCAGGGTATACCTCCGCAGTCGACAGCCACGCGCCCAGAGGAGGGCTCCCACGCGTCCGCCGTCGACAAACAGAACTCACAAAATATGCAGCACAAAATCAAACCACCCACACCAAAGACGCCACAGGGCAGCAACAGTGGCAATAGTTCTAGTTCGACTCCAACTGGCGCCGGCGGCGGTGGGCCCGGCGGACCTGGTGGACCGGGAGGCAACAACGGTGGCGGAGGATCTCAATCTCAGTACCCCGGCTCCCATCCGGCCTACCCACCTCAGCAGCACCCGGCGTTCCAGGAAAACTCGGCGTCACTCGTCAAGCCTACCAGTCACATGGACGCACTGCGGGCGCACGCTCATTCGGCGAGCAGCAGCCTCGGCAGTCACCATTCTACGGAACCTTTACCCATTGATATTGAGCCAGATCCCGAGCCGGAGATCCCAAGCCCGACGCACAACATCCCCCGTGGACCGAGTCCTGAAGCGAAGCCCGATGACACCGAATGCCACCGCTCGCAATCGGCAATATTCGTTCGTCACATTGATCGGGGAGACTACAACTCCTGCACAAGGACTGATTTGATATTCAAACCAGTTGCTGACTCTAAGTTGGCCCGAAAGAGGGAGGAGCGTGACCGAAAGATTGCCGAGAAGGAACGTGAACGGCGGCAGCAAGCGGCCCAGCAGGCCAAACTCAAAGCAGAGCTCAAGCCGCCGTACGCCGACACGCCCGCGCTGCGACAGCTATCGGAATACGCCAGGCCACACGTTGCATTCAGCCCTGTTGAACCGATGGTAGCACCATATCATCACCCAATGGGGCCAATGTATAGTAGAGAGAGAGAACTGGAGGATCTGAAGAACGCACAGGCAGCAGCTGCTGCTAGTCAATCACGATTGGATCCGGCCTGGATGGAATACTATAGAATGAGAGGAATGCATCCCTCACATATCCCACTATACGCGAATCCCGCTGCAATATCACAAATGGAAAGGGAACGTTTAGGAATACCACCACCGCATCATGTGGGCATGGATCCAAACGAGCACATGATACGATTGACCCGAGAATATCATGCACATTCTCATACTCATTTACATTTGCCTTTGCCTTCACAGCAACAACAGGAGGCCGGATTTCAACTGCCACCGAATGTTGGACCATATCCGAGACCAAATATGCTTATGCCGAGGGAACCTCATTCGGATGTTTTACTTCGGATGTCGTACGCTGATCAACTTCAGTATTTACAGGCGGCTGAATATCAACGGCAATCACTGCATGATCAGTATTTCAGGTAA
Protein Sequence
MAASTQGEIRVGPGHQVNDVYAKLPDYNPISSFPVDKEIDERELEEPRWSPGILADGDLIMFVRAARSMAAFQGMCDGGLEDGCLAASRDDTTINAFDVLHDSGYDTGTALQALVKCPVSKGIDKKWTEDETKKFIKGLRQFGKNFFRIHKDLLPHKETPELVEFYYLWKKTPGANNNRPHRRRRQSSLRRNRVTRASNTPPKKEDTPEPQAATESRPSPVSKEENSSLTEDDVSECDSDSSLTNKRDESPSRMRTRNKQQQNNNKEQVANGKRPKRGGTETPEVTDSSSPKTPTKTESNNKRKQAKQDTPNKKKRSDTDGDITDDSKEKRKRSDSPVESMNSDSRPDSVLDEGENTNDTPEPPQIVGSDSVPPKDVDEKTSDEKVTASAAENPVKAEKELEQDEETNQQAPIVAQQQPQQLVEKQGSSDDSASGGKLSQPSEEPLNENETSQEATAPLPAAPPGEELVNNSGYVPKEQEMLTKIANMKQETNISLQQATANMGVPPPQPQIAPAGPPQPPPLEYSPKEVYIKKEPLEDSSSMDATCNQNSNEPQDLKVKIEVKSEDAKPNVNISPAGMPVGLPASTINPQACVSEAPEHKYENQPPPFDGHIKFGNPGSEVKYPADIEMKYNDAIKYNPPSEGVPKFPHEIKYAPPCEPMKYGQEMPGKYELKYGIEHGLPPKSFNEPIKIPDLKAYQQHPPQENQMKYPQLGGDPNQNPVAMPKPHYQADVHPLSRSPYDSSIMLKYGDPMTAKYGLGPPPGHQQPQDLKYPPPDGALKSAYHGENLIKSSPYSDPQGGGSGGKYPPSESPIDASSRSTPNQDSQGSNSNSQQSQQFHSPHPSPHMPSAVPAGMHPQNLVSQHPGMPPNSMLMPPSSAPNILLPPSSLQHMQPGGPSHLPPLHRPHQDLPPSLHHPGIPLSLQGHGGHGIPPPPQGHHPSSMQQQSSANQQQGVRTPSPAQQRSLDSQNNSNSQSNNREQQMQQSQPTHRTSPLPGLSNPPPGMLGHPMPLHPHLHMQGHPVHHPGHMMGGPGMGGAGGPGAPLSLIGTSMSGITDSGINRRTPPVGGIPSSVSSASSAQTTTTVPSSAFSRASPSVQNSSAPSSGPQMHNNSSSGSSSHRPPSPSPSGNSISRQSPLHPVPQSPLGHHPSASALSAAAAAVAERDRHALLRQQSPHMTPPPVSSASALMASPLSKMYGPQGQRGLGTSPPPHLRPGASPPVIRHPQMPLPLPLLGPSPGMPQIGVHPGQAPYPHHLLHTSMFYSHHHNPFNSPYPYHPYGPGFPAAYMKPPPPAGPLDPAAVMAHHQGIPPQSTATRPEEGSHASAVDKQNSQNMQHKIKPPTPKTPQGSNSGNSSSSTPTGAGGGGPGGPGGPGGNNGGGGSQSQYPGSHPAYPPQQHPAFQENSASLVKPTSHMDALRAHAHSASSSLGSHHSTEPLPIDIEPDPEPEIPSPTHNIPRGPSPEAKPDDTECHRSQSAIFVRHIDRGDYNSCTRTDLIFKPVADSKLARKREERDRKIAEKERERRQQAAQQAKLKAELKPPYADTPALRQLSEYARPHVAFSPVEPMVAPYHHPMGPMYSRERELEDLKNAQAAAAASQSRLDPAWMEYYRMRGMHPSHIPLYANPAAISQMERERLGIPPPHHVGMDPNEHMIRLTREYHAHSHTHLHLPLPSQQQQEAGFQLPPNVGPYPRPNMLMPREPHSDVLLRMSYADQLQYLQAAEYQRQSLHDQYFR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00389571;
90% Identity
-
80% Identity
-