Spip002565.1
Basic Information
- Insect
- Syritta pipiens
- Gene Symbol
- dnajc2
- Assembly
- GCA_905187475.1
- Location
- LR994574.1:39827610-39829527[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.0025 3.8 7.8 0.0 4 31 422 453 420 461 0.83 2 2 7.2e-12 1.1e-08 35.2 0.2 3 41 542 584 540 588 0.91
Sequence Information
- Coding Sequence
- ATGCAGTTTTCTTCGAGTTGCATTTGCTTGTCGCTCAATCTCGTTTCTAAGGAAGTCCAACGAGTTGGCCTTAGATATCAAATATTTACGGGAAGTTCCGACGTTTTGGGTAGAACGAACGCCGAGGCTTTAGAAAATTGGGATGCGAATGAGTTTGTTGCCGATTTCGATTACTTAAGGTCCCTCGATCCGAAGGAATGGAAAGAACAAGATCATTATTCCGTTTTGGGGTTAGGTCATTTGAGGTTCGACGCAACTGACGACGACATAAGACGAGCGTACAGGAAAATGGTTCTGCAACACCATCCGGATAAGAGAAAATCGAAAGGTGAAGAAGTTAATGCGGACACGGACTATTTTACATGTATAACGAAGGCGTATGAAGTTTTGGGCACTCAAAAAACACGTCGCGCCTATGATTCAGTTGACCCGAAGTTTGATGATTCGCTACCAACACAGGCAGAGATAGAACACAACTTCTATGAGACGTTTGGAAAATGCTTTGATTTGAACTCGAGGTGGAGCGAGCGAAAAAACGTTCCATCTTTTGGCGATGAGCATGCAAAGAGGAAGGATGTTGATAATTTTTATAGTTTTTGGTACGATTTTGAATCATGGAGGGAGTTCAGTTATTTAGACGAAGAAGACAAGGAAAAAGGACAGGATAGAGACGAAAGACGGTGGATTGAGAAACAGAACAAAGCCGCCAGAATTAAACGAAAAAAGGAAGAAATGTCGAGGATAAGGTCGCTAGTCGATTTAGCCTACAATAATGATAAGCGTATTATTAAATTTAAAAACGAAGAAAAGCAAAGAAAAATAGCGCTAAAACGGGCAAAGATGGATGCCGCTCAAGCGCAGAAAGAAGAAATGGAACGGGCGGTTAAGGAGGCGCAGATAGCAAAAGAAAAAGCAGACAAGGCGGAGCAGAAAAGAATAGAAAAAATACGTTTAGAAAAAGAGCAATATAAAAAGGCTATTAAAAAGGAGAGGAAGCTCCTTAGGGATAAGGCCAAGGAATGCAACTACTTCTCAACTTCCGACAAAGAAATGCTTTCAAACATGGAGGGAGTAGAGAAGATATGCGAAATGTTGTCACTATGTGAACTACAGAGTCTGAATAAAGAAATCGAAAAGGATAGTGCTAAGGTATTTTTTGAAACTCTGGCAAAACTAGAAAACAAGCTCAGCATTGAGCGACAACAACCACATACAAAACTTGAAGGGAAATCGGAATTGAAAATAGTAAACAAGAACGAGCTATGGACAAATGATAGGACTCAACTCTTAATTAAGGCAGTTAATATCTTTCCGGCGGGAACTGCACAGCGATGGGAGGTTATTGCAACATTTATAAATCAACATGGTAATAGCGACGTCAGTTTTACTTCTAGAGACGTGTTGAGTAAAGCAAAGTTGCTTCAACAAAGCGACTTCTCCAAGAGTGCTCTAAAAACCGAAGCGAATGATGGCGCATTTCAAAGTTTTCAAAAATCTAAAAAAGATCTGCAAGTTGTCTCCGATGATGTACTTGCCGATAATGTAGTAGAAACAAACACTTGCGAAATTAAGGAGACGCCTGCCAGCATCTTGAATAAAAACCCTCTGAGTACACCTCAAAAAACTTGGACTAAAGAGGAGCAAGCACTTCTAGAGCAGGCGATCAAATCATTTCCTATTTCTACACCAGATCGTTGGGACAAGATTGCAGAGTGCATCCCTAATCGAAGCAAGAAAGATTGTTTGCGAAGAGTTAAGGAGCTGGTTGATTTAGTGAATTCGAAAAAAGACGCTAAACAGGTTACGAAGTAG
- Protein Sequence
- MQFSSSCICLSLNLVSKEVQRVGLRYQIFTGSSDVLGRTNAEALENWDANEFVADFDYLRSLDPKEWKEQDHYSVLGLGHLRFDATDDDIRRAYRKMVLQHHPDKRKSKGEEVNADTDYFTCITKAYEVLGTQKTRRAYDSVDPKFDDSLPTQAEIEHNFYETFGKCFDLNSRWSERKNVPSFGDEHAKRKDVDNFYSFWYDFESWREFSYLDEEDKEKGQDRDERRWIEKQNKAARIKRKKEEMSRIRSLVDLAYNNDKRIIKFKNEEKQRKIALKRAKMDAAQAQKEEMERAVKEAQIAKEKADKAEQKRIEKIRLEKEQYKKAIKKERKLLRDKAKECNYFSTSDKEMLSNMEGVEKICEMLSLCELQSLNKEIEKDSAKVFFETLAKLENKLSIERQQPHTKLEGKSELKIVNKNELWTNDRTQLLIKAVNIFPAGTAQRWEVIATFINQHGNSDVSFTSRDVLSKAKLLQQSDFSKSALKTEANDGAFQSFQKSKKDLQVVSDDVLADNVVETNTCEIKETPASILNKNPLSTPQKTWTKEEQALLEQAIKSFPISTPDRWDKIAECIPNRSKKDCLRRVKELVDLVNSKKDAKQVTK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -