Spip018331.1
Basic Information
- Insect
- Syritta pipiens
- Gene Symbol
- SMARCC2
- Assembly
- GCA_905187475.1
- Location
- LR994572.1:65920446-65924520[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4 3.7e+03 -1.7 0.0 34 43 204 213 203 213 0.87 2 2 1e-14 1.6e-11 44.3 0.1 3 44 638 679 636 681 0.95
Sequence Information
- Coding Sequence
- ATGGTATCCTTAGGTCCGAAAAAGGACGGAAACCCAAACGTGGAGTTTTTCCAATCTCCTGAATCAATGCAAGGCCTTGATACGATTCGAGTTTGGCTGCAAAAGAATTATAAAAAATATTTTGCTAACAGCCCGGATCCAATAACGAGTCAATCACTTTGCAATTTATTAATTCAATTTTTGCAATATGTCGAGGCGAAATTGGGAAAAAACACTACTGAACCTGCAACAACTCGAATACCCATGCGTTGTTTCTTGGATTTCAAACCGGGCGGTGGATTATGCGTAATATTCGCTACGATGTTTAGATTCCGTGCGGACCAGCGTGGAAAAAAATTTGATTTTTCAATCGGGAAGAACCCCCAGCGAAAGGATCCGAATATTCAATTGATGATGGATATTGAGCAGGCATTAATCGAAGCTGATCTTTATCGAATTCCTTACATCTACATCCGTCCAGAAGTGGACAAGGCTCTGACAGCTCGTATACGGGACATTCTGTCGACGAGGCGGGTGGAAATCGCTATCGATGAGGAGGAAGACGTCACTCATGTAATCTACCCAGTTGTAGATCCTCACCCAGATGAGTACGCCCGGCCGATTTTCAAGAGAGGCAACCATGTCATGCTTCATTGGTACTGTTTCCCGGAGTCGTACGACACATGGACACCGAACACATTCGACTTGCCGGATAATATCCCAGAAAATCCTGAATCTCCGTCGGAGAGATGGCGTGTGTCGGCAACGTGGATTCTTGACTTGGAGCAGTACAACGAGTGGATGGCTGAGGAAGACTATGAGGTCGATGAAAACGGCAAAAAGAAAATGCACAAGCATCGTTTGTCTGTCGAAGACCTAATGGCTTGCTCTGGGGATGAGAAGAAACGTTCGGGCAACAAACAGAAGCGCAGGCGTTCACCGTCGCCAACACAGAAGGCCGGAAAGAGGAAGCGGTCGCCAGCGGTGCTGCATAAGAAATCACGCAGTGGAGACGGTGATGATGACGACGACTTCACGAAGGACATGGAAGATCCGATTGCAGAGCCGAACATCCAGGAGGTTATCAAAACCTCGGCTATGCAGAGTACAGCGAGTCCAGCTCCGGCATCGAAGTCCAGGGATAATGACATGATGCCGATCAAAGGGGGAACTATGACGGATTTAGACGATGAAATGGAGCGCACTGGTACTGGGGGTCAAGTAGTAGCCCCGCCCGATGGCGAGAACTCGCAAACAGGGAAGACAAGCGAGAATAGCAACACACAGGAGTTCACGGCGAAGGAGGACATGGAGGACAATGTCACTGAGCAGACACACCACATCATTGTCCCCTCGTACTCGGCATGGTTCGACTACAATTCGATTCACGTGATTGAGAAGCGCGCTATGCCAGAGTTCTTCAACAGCAAGAACAAATCGAAAACGCCGGAGATATACATGGCCTACAGAAATTTCATGATTGACACTTACAGATTAAATCCAACTGAGTACTTAACGAGCACGGCATGCAGACGTAATTTAGCTGGCGATGTCTGCGCCATAATGCGCGTGCACGCATTCCTTGAGCAGTGGGGACTGATCAACTATCAAATCGATGCTGAGTTGCGTCCCACGCCAATGGGTCCACCGCCGACATCGCATTTCCATATTCTGAGTGACACACCATCCGGGTTACAGTCGTTGAATCCACAAAAGACTCCTCAGCCTTCGGCTGCCAAGTCGTTGCTAGATTTCGATAAGAAGAAGGAAGGTTTGAAGGAGGGTGAAGGCGAAAAGTCAATACTCACAGCAGGAGCTCCAGTCAAAGTGGAATCGATCGAGAATGGTGGTGGCCAATTCGGCCTTAAGCTCGATCAGTATACAAAGAAACCGGCTGCAATGAAAAATCGCACCGCAGCAAACATGGCACGGGAGTGGACAGACCAAGAAACTCTTTTACTTCTTGAAGGCTTGGAAATGTACAAGGATGACTGGAACAAGGTGTGCGAGCATGTCGGTACACGTACACAGGATGAGTGTATTTTGCATTTCCTCCGGTTGCCCATTGAAGATCCGTATTTAGAAGACGATGGAGGATTCTTGGGACCACTTGGCTACCAGCCAATTCCCTTTAGCAAGTCGGGAAATCCTATTATGTCTACTGTAGCATTCTTAGCCTCAGTTGTTGATCCACGCGTTGCGGCTGCTGCAGCTAAAGCTGCAATGGAGGAGTTTGCTGCTATTAAGGACGAAGTTCCATCTTCAATCATGGACACACACTATAAGAATGTTGAGAAACTAAATTCCACTGGCAAATTTGATCCGTACGCCGGACTTTCAAACAGCGGTATAGCTGGTACCGGAGCCGACAAGGACGAGGAGGACCCAACGAAGCCCTCATCAATGATAATACCACCAACAGCTACACAAGACGAAGAGATGAAAGATCTTTCCAAAAAAGAGCCTACAGCTGATTCCAGTAACCCTGAATCCCCAAATTCCGACTCTCCTAATCCTTCAGCAGCTGTAGAAACTATTAAACCTTCCACAATCACCTCCTCAATAGGTGTTGATGATAAGGAAATAAAAACAGAAGAATCTTCAATGGAATCCACCTCAGGTAGCACTGAGGCCACCAATGGATCAAAGGAAAACGGTGACGGAAGCCGTAAGCAAATTTTCAACGAAGCTAACTTGCAGACTGCCGCAGCAGCTGCTCTTGCTTCTGCCGCTGTTAAAGCTAAACATTTGGCCGCTTTGGAGGAGCGTAAAATCAAGTCGCTCGTTGCACTGTTGGTGGAAACTCAAATGAAAAAGTTGGAAATCAAGTTGAGACATTTCGAAGAGCTCGAAACCACGATGGAGAGGGAGCGTGAAGGATTGGAATATCAGAGGCAGCAACTTATCACAGAACGACAGCAGTTCCACTTGGAACAGTTAAAGGCAGCGGAATTCCGCGCGAGACAACAAGCTCACCATCGTATTCAACAAGAACAATGGCAGGGCAACGCCCCTCAGCCACCACCAGGTGTTCCCAATACAACTCCGATGACTGGAACAACTGGACCAGCTCCACCATCTTCAAGTGGTGTCACAGCACCAACAGCTTCTCAGCCAGCAGCACAACCATCGGGCTCTGTTCCATCGCAGCCACCAAGTGTGTTACAAACACCCTCTGTGTTAGAACCACATTCCCAACAACAACCAATGTCACAAGTTGGATCCATTGAGCCGAGCATGCCGCCCCAAGGACCTCCGCCAGTAGCTGCTGGGCCCTTGCAGCAAACAACCCCACAGCAGATGCAACAACAGCAACCCCCACCAGTTGTTCCACCCAGCATTATTCCTGTACCACCATCGCCATCACCTCAGACTTAA
- Protein Sequence
- MVSLGPKKDGNPNVEFFQSPESMQGLDTIRVWLQKNYKKYFANSPDPITSQSLCNLLIQFLQYVEAKLGKNTTEPATTRIPMRCFLDFKPGGGLCVIFATMFRFRADQRGKKFDFSIGKNPQRKDPNIQLMMDIEQALIEADLYRIPYIYIRPEVDKALTARIRDILSTRRVEIAIDEEEDVTHVIYPVVDPHPDEYARPIFKRGNHVMLHWYCFPESYDTWTPNTFDLPDNIPENPESPSERWRVSATWILDLEQYNEWMAEEDYEVDENGKKKMHKHRLSVEDLMACSGDEKKRSGNKQKRRRSPSPTQKAGKRKRSPAVLHKKSRSGDGDDDDDFTKDMEDPIAEPNIQEVIKTSAMQSTASPAPASKSRDNDMMPIKGGTMTDLDDEMERTGTGGQVVAPPDGENSQTGKTSENSNTQEFTAKEDMEDNVTEQTHHIIVPSYSAWFDYNSIHVIEKRAMPEFFNSKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAELRPTPMGPPPTSHFHILSDTPSGLQSLNPQKTPQPSAAKSLLDFDKKKEGLKEGEGEKSILTAGAPVKVESIENGGGQFGLKLDQYTKKPAAMKNRTAANMAREWTDQETLLLLEGLEMYKDDWNKVCEHVGTRTQDECILHFLRLPIEDPYLEDDGGFLGPLGYQPIPFSKSGNPIMSTVAFLASVVDPRVAAAAAKAAMEEFAAIKDEVPSSIMDTHYKNVEKLNSTGKFDPYAGLSNSGIAGTGADKDEEDPTKPSSMIIPPTATQDEEMKDLSKKEPTADSSNPESPNSDSPNPSAAVETIKPSTITSSIGVDDKEIKTEESSMESTSGSTEATNGSKENGDGSRKQIFNEANLQTAAAAALASAAVKAKHLAALEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLITERQQFHLEQLKAAEFRARQQAHHRIQQEQWQGNAPQPPPGVPNTTPMTGTTGPAPPSSSGVTAPTASQPAAQPSGSVPSQPPSVLQTPSVLEPHSQQQPMSQVGSIEPSMPPQGPPPVAAGPLQQTTPQQMQQQQPPPVVPPSIIPVPPSPSPQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00672158;
- 90% Identity
- iTF_00312554;
- 80% Identity
- -